FFCP PHASE1:Hg19::chr1:55266926..55266958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55001 | |EntrezGene=55001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |HGNC=26067 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAA0 | |UniProt=Q5TAA0 | ||
|association_with_transcript=0bp_to_ENST00000371276,NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | |association_with_transcript=0bp_to_ENST00000371276,NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | ||
|cluster_id=chr1:55266926..55266958,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_2_at_TTC22_5end | |description=CAGE_peak_2_at_TTC22_5end | ||
|id=chr1:55266926..55266958,- | |id=chr1:55266926..55266958,- | ||
|ontology_enrichment_celltype=CL:0002076!4.28e-12!43;CL:0002251!3.56e-10!21;CL:0000791!8.88e-09!18;CL:0000789!8.88e-09!18;CL:0002420!8.88e-09!18;CL:0002419!8.88e-09!18;CL:0000790!8.88e-09!18;CL:0000223!5.25e-08!59;CL:0000625!8.89e-07!11 | |ontology_enrichment_celltype=CL:0002076!4.28e-12!43;CL:0002251!3.56e-10!21;CL:0000791!8.88e-09!18;CL:0000789!8.88e-09!18;CL:0002420!8.88e-09!18;CL:0002419!8.88e-09!18;CL:0000790!8.88e-09!18;CL:0000223!5.25e-08!59;CL:0000625!8.89e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000575;2.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.37e-09!14 | |ontology_enrichment_disease=DOID:1749!4.37e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.43e-14!169;UBERON:0000925!4.43e-14!169;UBERON:0006595!4.43e-14!169;UBERON:0001007!8.39e-11!155;UBERON:0001555!8.39e-11!155;UBERON:0007026!8.39e-11!155;UBERON:0000166!3.23e-09!21;UBERON:0004921!7.20e-09!129;UBERON:0004185!7.20e-09!129;UBERON:0007023!9.17e-09!115;UBERON:0000161!3.36e-08!35;UBERON:0001004!2.10e-07!72;UBERON:0000077!3.18e-07!130;UBERON:0000974!8.37e-07!10 | |ontology_enrichment_uberon=UBERON:0004119!4.43e-14!169;UBERON:0000925!4.43e-14!169;UBERON:0006595!4.43e-14!169;UBERON:0001007!8.39e-11!155;UBERON:0001555!8.39e-11!155;UBERON:0007026!8.39e-11!155;UBERON:0000166!3.23e-09!21;UBERON:0004921!7.20e-09!129;UBERON:0004185!7.20e-09!129;UBERON:0007023!9.17e-09!115;UBERON:0000161!3.36e-08!35;UBERON:0001004!2.10e-07!72;UBERON:0000077!3.18e-07!130;UBERON:0000974!8.37e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.49e-17;33!UBERON:0001041;3.16e-10;14!UBERON:0005409;2.70e-09;22!UBERON:0001555;6.96e-09;54!UBERON:0000160;1.38e-07;17!UBERON:0006562;1.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.23e-10,118;UBERON:0004119,7.05e-10,160;UBERON:0000925,7.05e-10,160;UBERON:0006595,7.05e-10,160;UBERON:0001007,7.29e-09,145;UBERON:0001555,7.29e-09,145;UBERON:0007026,7.29e-09,145;UBERON:0005409,2.72e-08,25;UBERON:0000160,8.19e-08,17;UBERON:0001041,2.06e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.492603536699674,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,1.8072355126695,1.47901604066715,0,0,0,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0.822405995998037,0.334372990781356,0.651844533267181,0,0,0,1.17842362989935,1.10766947291811,1.35401931882508,1.15282187753108,0.780356085359269,0,0.276350017785848,0,0.296573126324121,0.802622484269139,0,0.793165398882963,0,0,0.253019692019503,0.95569624297229,0,0.950452044448374,0.602300476311091,0.76791966692651,2.49861453104692,0.236777252044017,0,1.00803371612366,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0.486634870302636,0,0,0,1.0478326039817,1.82147644146271,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.35287282397425,0,0.219500570817251,0,0.201057944823262,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,1.13420077793909,0.358234090811393,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.985153801009636,1.72502059887614,0.641715181398742,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.736647911487171,0,0,0,0,0.385076685522074,0,1.46139224653261,0,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,1.08890984861323,0.376575203107117,1.29151611801369,0,0.886860307073351,1.1486170010348,1.01489521846434,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,1.58625035258854,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,2.563197838382,0,0.47748896947538,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,0,0.597743964753209,0.552567831062295,2.01546198283421,0,0,0,0.988551862620595,1.79021174675609,0,0,0,0,0,0,0,0,0,0,2.84483620713749,0,0.709163045303809,0,0,0,0,0.844175070377856,0,0.110579259931225,0,0.219385397153973,0,0.697118721393016,4.38616473471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,1.99052386215701,1.50377859655677,3.66618086960175,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0.69647365264322,0,0,0,0,0,17.3610339514271,0,0.677942222341597,0,0,0,0.977756913674015,0.561111741760736,1.28071796843612,0,1.87317542300338,0,0.171594997861965,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.449947783103001,0.77380195455795,0.0607495566580247,5.36695500158826,1.10327990218877,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0.129282956361551,0,0,0,0.320362237703084,0.314408610199332,1.24271716604159,0,0,0.121792598380896,1.91502377331055,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0.422624246717254,0,0,1.89436477626897,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0,0,1.47221577751538,0.235939446695481,0.917142992608395,0.693153996902029,0,0,0,0.0752103283492573,0,0,0,0,1.33070477595341,0,0,0.206686796501184,0.0634158101939068,0,1.09651553371436,0,0,1.02209942111676,0,0,0,0.91064876540519,0.0887023701626388,0.115233987555779,0,0,0,0.354581522651905,0.444925607568277,0.627944742804112,0.157115589916002,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,2.15113679410139,0,0,1.27016115057279,0.68732060563215,0,0,0,1.27595303699816,0.487671699929078,0,0,0,0.485710993059139,0,0,0,0,0,0,4.63044948647668,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0.892769693028288,1.76447435857846,0.0802413666891683,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0.109265571963696,0,0.407955318967927,0.534434810531121,1.01084389488329,1.25353769646188,0.0757786982182394,0,0,0.310298987585686,5.75731751132648,0.23806443146374,0.129177819672012,0.496597714366863,0,0.636471582781649,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| ||
|short_description=p2@TTC22 | |short_description=p2@TTC22 | ||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p2@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC22_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000371276, NM_001114108, NM_017904, uc001cxz.3, uc009vzt.1_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | Q5TAA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.23e-10 | 118 |
endoderm-derived structure | 7.05e-10 | 160 |
endoderm | 7.05e-10 | 160 |
presumptive endoderm | 7.05e-10 | 160 |
digestive system | 7.29e-09 | 145 |
digestive tract | 7.29e-09 | 145 |
primitive gut | 7.29e-09 | 145 |
gastrointestinal system | 2.72e-08 | 25 |
intestine | 8.19e-08 | 17 |
foregut | 2.06e-07 | 87 |