FFCP PHASE1:Hg19::chr19:13054632..13054644,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:13054632..13054644,-
|short_description=p19@CALR
|description=CAGE_peak_19_at_CALR_5end
|association_with_transcript=133bp_to_BC107102_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=133bp_to_BC107102_5end | |||
|cluster_id=chr19:13054632..13054644,- | |||
|coexpression_cluster_id=C1059 | |||
|description=CAGE_peak_19_at_CALR_5end | |||
|id=chr19:13054632..13054644,- | |||
|ontology_enrichment_celltype=CL:0000548!5.96e-12!679;CL:0000004!5.96e-12!679;CL:0000255!5.96e-12!679;CL:0000012!1.48e-11!682;CL:0000055!2.47e-10!180;CL:0000144!5.17e-08!625;CL:0002371!2.87e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.36e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.90e-09,76;CL:0002620,3.66e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p19@CALR | |||
}} | }} |
Latest revision as of 22:34, 15 September 2015
Short description: | p19@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CALR_5end |
Coexpression cluster: | C1059_Fibroblast_Adipocyte_Smooth_Chondrocyte_neuroectodermal_Hair_Preadipocyte |
Association with transcript: | 133bp_to_BC107102_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.90e-09 | 76 |
skin fibroblast | 3.66e-07 | 23 |