FFCP PHASE1:Hg19::chr20:5100591..5100611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5111 | |EntrezGene=5111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8729 | |HGNC=8729 | ||
|TSSclassifier=strong | |||
|UniProt=P12004 | |UniProt=P12004 | ||
|association_with_transcript=35bp_to_NM_182649,uc002wlp.2_5end | |association_with_transcript=35bp_to_NM_182649,uc002wlp.2_5end | ||
|cluster_id=chr20:5100591..5100611,- | |||
|coexpression_cluster_id=C1145 | |coexpression_cluster_id=C1145 | ||
|description=CAGE_peak_1_at_PCNA_5end | |description=CAGE_peak_1_at_PCNA_5end | ||
|id=chr20:5100591..5100611,- | |id=chr20:5100591..5100611,- | ||
|ontology_enrichment_celltype=CL:0000548!6.39e-21!679;CL:0000004!6.39e-21!679;CL:0000255!6.39e-21!679;CL:0000012!9.35e-21!682;CL:0000066!1.26e-18!254;CL:0000003!3.29e-15!722;CL:0000063!2.76e-13!578;CL:0000144!7.31e-07!625 | |ontology_enrichment_celltype=CL:0000548!6.39e-21!679;CL:0000004!6.39e-21!679;CL:0000255!6.39e-21!679;CL:0000012!9.35e-21!682;CL:0000066!1.26e-18!254;CL:0000003!3.29e-15!722;CL:0000063!2.76e-13!578;CL:0000144!7.31e-07!625 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.39e-19,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.60e-46!235;DOID:14566!2.56e-45!239;DOID:0050687!9.98e-23!143;DOID:0050686!1.59e-22!137;DOID:305!5.15e-22!106;DOID:2531!3.73e-17!51;DOID:0060083!3.73e-17!51;DOID:1240!8.08e-14!39;DOID:8692!2.87e-10!31 | |ontology_enrichment_disease=DOID:162!9.60e-46!235;DOID:14566!2.56e-45!239;DOID:0050687!9.98e-23!143;DOID:0050686!1.59e-22!137;DOID:305!5.15e-22!106;DOID:2531!3.73e-17!51;DOID:0060083!3.73e-17!51;DOID:1240!8.08e-14!39;DOID:8692!2.87e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.41e-11;39!DOID:2531;7.28e-11;51!DOID:0060083;7.28e-11;51!DOID:8692;6.83e-10;31!DOID:305;2.82e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.60e-46,235;DOID:14566,2.56e-45,239;DOID:0050687,9.98e-23,143;DOID:0050686,1.59e-22,137;DOID:305,5.15e-22,106;DOID:2531,3.73e-17,51;DOID:0060083,3.73e-17,51;DOID:1240,8.08e-14,39;DOID:8692,2.87e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.45e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!7.45e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.39e-07;9!UBERON:0001557;7.39e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.45e-07,9 | |||
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| ||
|short_description=p1@PCNA | |short_description=p1@PCNA | ||
}} | }} |
Latest revision as of 00:35, 17 September 2015
Short description: | p1@PCNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCNA_5end |
Coexpression cluster: | C1145_Hodgkin_chronic_acute_Reticulocytes_lymphoma_diffuse_Hep2 |
Association with transcript: | 35bp_to_NM_182649, uc002wlp.2_5end |
EntrezGene: | PCNA |
HGNC: | 8729 |
UniProt: | P12004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.39e-19 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.60e-46 | 235 |
disease of cellular proliferation | 2.56e-45 | 239 |
cell type cancer | 9.98e-23 | 143 |
organ system cancer | 1.59e-22 | 137 |
carcinoma | 5.15e-22 | 106 |
hematologic cancer | 3.73e-17 | 51 |
immune system cancer | 3.73e-17 | 51 |
leukemia | 8.08e-14 | 39 |
myeloid leukemia | 2.87e-10 | 31 |