FFCP PHASE1:Hg19::chr20:55091968..55091976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200232 | |EntrezGene=200232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |HGNC=16100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-266bp_to_ENST00000481560_5end | |association_with_transcript=-266bp_to_ENST00000481560_5end | ||
|cluster_id=chr20:55091968..55091976,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_6_at_FAM209A_5end | |description=CAGE_peak_6_at_FAM209A_5end | ||
|id=chr20:55091968..55091976,+ | |id=chr20:55091968..55091976,+ | ||
|ontology_enrichment_celltype=CL:0002566!3.13e-07!1 | |ontology_enrichment_celltype=CL:0002566!3.13e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002566;1.71e-66;1!CL:0000148;1.10e-59;10!CL:0000147;4.85e-43;14!CL:0000710;1.56e-30;20!CL:0002567;2.93e-23;3!CL:0000075;5.98e-23;27!CL:0002077;1.59e-17;34!CL:0000150;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,2.39e-66,1;CL:0000148,1.10e-59,10;CL:0000541,1.10e-59,10;CL:0000147,4.85e-43,14;CL:0000710,1.56e-30,20;CL:0002567,2.62e-23,3;CL:0000075,5.98e-23,27;CL:0002077,1.78e-18,34;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72;CL:0000150,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000133;4.44e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!4.68e-12!2 | |ontology_enrichment_disease=DOID:1909!4.68e-12!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@FAM209A | |short_description=p6@FAM209A | ||
}} | }} |
Latest revision as of 03:20, 17 September 2015
Short description: | p6@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM209A_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -266bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.39e-66 | 1 |
melanocyte | 1.10e-59 | 10 |
melanoblast | 1.10e-59 | 10 |
pigment cell | 4.85e-43 | 14 |
neurecto-epithelial cell | 1.56e-30 | 20 |
light melanocyte | 2.62e-23 | 3 |
columnar/cuboidal epithelial cell | 5.98e-23 | 27 |
ecto-epithelial cell | 1.78e-18 | 34 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
glandular epithelial cell | 1.21e-08 | 9 |