FFCP PHASE1:Hg19::chr22:37257072..37257091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4689 | |EntrezGene=4689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7662 | |HGNC=7662 | ||
|TSSclassifier=strong | |||
|UniProt=Q15080,A8K4F9,B0QY04 | |UniProt=Q15080,A8K4F9,B0QY04 | ||
|association_with_transcript=42bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end | |association_with_transcript=42bp_to_ENST00000248899,ENST00000397147,ENST00000447071,NM_000631,NM_013416,uc003apy.3,uc003apz.3_5end | ||
|cluster_id=chr22:37257072..37257091,+ | |||
|coexpression_cluster_id=C2643 | |coexpression_cluster_id=C2643 | ||
|description=CAGE_peak_2_at_NCF4_5end | |description=CAGE_peak_2_at_NCF4_5end | ||
|id=chr22:37257072..37257091,+ | |id=chr22:37257072..37257091,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.48e-73!172;CL:0000566!4.48e-73!172;CL:0002032!1.30e-69!165;CL:0000837!1.30e-69!165;CL:0000988!5.41e-69!182;CL:0000763!1.39e-61!112;CL:0000049!1.39e-61!112;CL:0000738!2.16e-55!140;CL:0002031!9.61e-46!124;CL:0000766!2.12e-44!76;CL:0002087!4.89e-43!119;CL:0000557!8.54e-40!71;CL:0000839!2.39e-38!70;CL:0002009!1.69e-36!65;CL:0002194!2.67e-35!63;CL:0000576!2.67e-35!63;CL:0000040!2.67e-35!63;CL:0000559!2.67e-35!63;CL:0002057!4.31e-30!42;CL:0000860!9.43e-27!45;CL:0000134!6.36e-10!358;CL:0000542!5.17e-09!53;CL:0000051!5.17e-09!53;CL:0002320!5.64e-09!365;CL:0000838!9.51e-09!52;CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000094!8.26e-08!8;CL:0000451!7.32e-07!10 | |ontology_enrichment_celltype=CL:0000037!4.48e-73!172;CL:0000566!4.48e-73!172;CL:0002032!1.30e-69!165;CL:0000837!1.30e-69!165;CL:0000988!5.41e-69!182;CL:0000763!1.39e-61!112;CL:0000049!1.39e-61!112;CL:0000738!2.16e-55!140;CL:0002031!9.61e-46!124;CL:0000766!2.12e-44!76;CL:0002087!4.89e-43!119;CL:0000557!8.54e-40!71;CL:0000839!2.39e-38!70;CL:0002009!1.69e-36!65;CL:0002194!2.67e-35!63;CL:0000576!2.67e-35!63;CL:0000040!2.67e-35!63;CL:0000559!2.67e-35!63;CL:0002057!4.31e-30!42;CL:0000860!9.43e-27!45;CL:0000134!6.36e-10!358;CL:0000542!5.17e-09!53;CL:0000051!5.17e-09!53;CL:0002320!5.64e-09!365;CL:0000838!9.51e-09!52;CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000094!8.26e-08!8;CL:0000451!7.32e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.00e-27;39!CL:0000234;1.00e-27;39!CL:0000860;1.87e-27;33!CL:0002057;1.87e-27;33!CL:0000576;1.74e-26;48!CL:0000766;8.76e-24;69!CL:0000763;1.54e-23;100!CL:0000988;7.01e-14;177!CL:0000738;2.66e-13;136!CL:0002087;8.27e-13;104!CL:0000094;4.43e-09;8!CL:0000945;1.13e-07;24!CL:0000235;3.33e-07;6!CL:0000081;4.56e-07;11!CL:0000451;8.26e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.07e-79,168;CL:0000763,1.64e-77,108;CL:0000049,1.64e-77,108;CL:0000988,6.65e-76,177;CL:0002032,1.16e-74,161;CL:0000837,1.16e-74,161;CL:0000766,7.23e-59,72;CL:0000738,1.58e-58,136;CL:0000557,3.83e-53,67;CL:0000839,5.52e-50,66;CL:0002009,3.47e-49,61;CL:0002194,9.79e-48,59;CL:0000576,9.79e-48,59;CL:0000040,9.79e-48,59;CL:0000559,9.79e-48,59;CL:0002031,3.94e-47,120;CL:0002087,6.02e-45,115;CL:0000473,6.45e-42,48;CL:0000234,6.45e-42,48;CL:0000860,5.19e-36,42;CL:0002057,5.19e-36,42;CL:0000134,1.29e-14,354;CL:0002320,1.32e-13,361;CL:0000219,3.61e-10,386;CL:0000094,4.21e-09,8;CL:0000945,8.61e-08,24;CL:0000826,8.61e-08,24;CL:0002393,2.63e-07,9;CL:0002397,2.63e-07,9;CL:0000235,3.18e-07,6;CL:0000081,4.26e-07,11;CL:0000451,6.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;5.48e-26;42!CL:0000049;1.45e-21;108 | |||
|ontology_enrichment_disease=DOID:1240!1.18e-14!39;DOID:8692!1.26e-14!31;DOID:2531!1.53e-14!51;DOID:0060083!1.53e-14!51 | |ontology_enrichment_disease=DOID:1240!1.18e-14!39;DOID:8692!1.26e-14!31;DOID:2531!1.53e-14!51;DOID:0060083!1.53e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.34e-17;31!DOID:1240;4.16e-14;39!DOID:2531;2.49e-10;51!DOID:0060083;2.49e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.48e-18,39;DOID:8692,5.33e-18,31;DOID:2531,2.59e-16,51;DOID:0060083,2.59e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-47!102;UBERON:0003061!1.24e-47!102;UBERON:0002193!1.91e-42!112;UBERON:0002371!9.67e-35!80;UBERON:0001474!3.05e-30!86;UBERON:0007023!4.48e-26!115;UBERON:0002405!1.14e-25!115;UBERON:0004765!3.71e-22!101;UBERON:0001434!3.71e-22!101;UBERON:0003081!7.16e-11!216;UBERON:0000178!7.86e-11!15;UBERON:0000179!7.86e-11!15;UBERON:0000463!7.86e-11!15;UBERON:0002384!4.63e-08!375;UBERON:0002204!3.81e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.24e-47!102;UBERON:0003061!1.24e-47!102;UBERON:0002193!1.91e-42!112;UBERON:0002371!9.67e-35!80;UBERON:0001474!3.05e-30!86;UBERON:0007023!4.48e-26!115;UBERON:0002405!1.14e-25!115;UBERON:0004765!3.71e-22!101;UBERON:0001434!3.71e-22!101;UBERON:0003081!7.16e-11!216;UBERON:0000178!7.86e-11!15;UBERON:0000179!7.86e-11!15;UBERON:0000463!7.86e-11!15;UBERON:0002384!4.63e-08!375;UBERON:0002204!3.81e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.50e-13;15!UBERON:0000179;7.50e-13;15!UBERON:0000463;7.50e-13;15!UBERON:0002390;1.04e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-60,98;UBERON:0003061,1.05e-60,98;UBERON:0002193,5.71e-55,108;UBERON:0002371,4.23e-47,76;UBERON:0002405,8.82e-43,93;UBERON:0001474,1.03e-41,82;UBERON:0004765,1.10e-35,90;UBERON:0001434,1.41e-29,100;UBERON:0003081,8.79e-20,203;UBERON:0000178,9.63e-13,15;UBERON:0000179,9.63e-13,15;UBERON:0000463,9.63e-13,15;UBERON:0002384,1.11e-12,371;UBERON:0002204,3.44e-11,167;UBERON:0007023,1.28e-09,114;UBERON:0000926,5.78e-07,315;UBERON:0004120,5.78e-07,315;UBERON:0006603,5.78e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.32243550125005,8.04585776609468,7.47752422479953,14.9478425202584,4.98978217526377,6.19264493264304,0,0,0,1.85921281392724,0.142169232487422,10.2760153767197,9.41792194504192,11.0299446108578,8.89744569934992,55.0832066630214,43.4017512465433,50.7423868239348,18.3201780862252,11.3362783106643,15.5253799160202,15.1078873988695,11.1015329765893,11.1494293522237,43.4415512406447,34.8378560879577,36.1817811729535,7.23965929546899,10.973239620925,5.41705946377367,17.8830222565474,14.191119803008,11.6856211911444,14.3859429414324,11.8743740018155,11.5080682643827,81.4732711461189,53.2567965849757,53.2780938165868,11.6083695451434,8.5107783703671,7.4738669879469,30.1498398308092,30.7674921867919,30.8408159481266,13.3187890579341,9.94349617166425,9.17740923578565,9.50648788403738,5.95292039902122,6.70907665626803,19.9944963440761,15.4682199626751,10.9293398954014,3.99017841237748,3.18266683518544,2.37463399894024,0,3.27683166757279,1.77901850772711,3.41384178053206,1.60158394814405,3.4485146397269,5.2883589822789,4.77026877267682,1.1384259382189,2.34894875748376,0.382273228125229,11.8954195721123,3.92355994087075,6.32121803460185,0,0.393010762749165,0.205601498999509,11.2014951911754,0.651844533267181,0.473447805734733,0,12.0323293435987,1.76763544484902,1.99380505125259,0.812411591295047,9.09448370052294,10.0145697621106,12.8261565590867,15.4756009960075,9.27369874352168,0,0,0,4.53237370790265,0.766440987203842,0.34362744548263,1.01207876807801,0.318565414324097,0,0,1.20460095262218,0.639933055772092,2.49861453104692,2.13099526839615,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.30979075497713,0,0,7.7891374477124,4.17911369518241,6.24902414438666,9.77811559651902,18.3038371449641,11.1437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,133.098221610424,143.47869773488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8830495904775,5.85010662848094,16.2007966894714,0,0,0,0,0,0,2.95597942737566,7.48411689112421,5.80518723514162,1.72943944100354,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.7845610308286,55.750537148966,59.0335030552489,0,0,0,0,0,0,4.9317463357152,0.788123040807709,0.215627574859517,0.256686072559497,0,0,0,0.335032530668698,0,61.418575963669,50.8574480646842,72.5227148513062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,7.33428282783297,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,2.3529190592241,0,0,0,3.29731237272711,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,3.29503302718727,0,0,0,0,43.1330467847344,40.5257719785459,58.6736602789387,25.2525681985256,32.0862573007231,51.2293915842247,37.802200606668,66.6225148087187,0,0,0,1.48642540100575,14.4269212976445,0,0,12.3739210288346,56.6855895591805,55.2468050909334,22.0742919386698,92.9438659555549,8.6729178032613,19.1149472843088,32.5824820217087,31.8268542267014,22.4823305145179,38.140144659108,20.866465646826,23.358363443392,5.53033375755224,6.26293102098765,9.17670279415497,20.1249738264102,0,1.23087398947712,38.6751620220656,33.6402687677798,15.5085705596634,0,3.22317994398167,0,3.34330152832435,0,0,0,0,0.994147647766298,0.844016498463076,0,5.43852784948307,0,2.78947183551498,9.11736921252787,0.251932747854276,0,2.95403533106567,0,0,0,24.043901400663,1.28236427328014,23.948309234694,0,1.93866549219044,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.08536794762867,0,0.221158519862449,0,1.53569778007781,0,0,1.30815439456455,0,0,0.359030577639089,0,0,0.183195186803725,0.533034776018635,0,9.57579564009651,8.14437241310766,0,0,0,0,3.33766815858795,0,0,0,0,1.99052386215701,2.83064206410685,2.4441205797345,1.48260564340311,1.72989514525104,1.14864144456001,0.202203398942031,2.40773294189637,0.468528891450678,0,0,0,0.789168805698781,3.62972148145992,2.14250933141343,7.77194929430402,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0,0,0,0,2.13375836274523,0,1.35588444468319,0,0,0.316553979779393,0,0,3.62870091056899,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.46429682005587,19.1619882100458,0,3.6804229599104,1.95497680890578,1.14580212005842,2.15361907373044,0.599037001496973,0.429226048136571,2.23171457441873,0.806201669840715,0,0,0,0,0,0,0.508039992394707,0,0.681017030557878,0,0,0,7.64911231275102,6.1904156364636,0.0607495566580247,0,0.945668487590378,0.681909645754975,0,0,0,4.2881719582402,1.32418394073086,0,0,0,0,0,8.86599224092861,0,0,0.58620893471233,2.65013777824443,1.0342636508924,1.05786081394152,0,0,4.48507132784318,0.78602152549833,3.72815149812476,6.45015828355536,4.34745590175477,3.89736314818867,0,0,0.2506898940227,0.919036730290385,0,0,0,0.610131324509816,0.876336514945499,0.57340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| ||
|short_description=p2@NCF4 | |short_description=p2@NCF4 | ||
}} | }} |
Latest revision as of 03:15, 20 September 2015
Short description: | p2@NCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCF4_5end |
Coexpression cluster: | C2643_Eosinophils_acute_Neutrophils_CD14_Whole_Monocytederived_Macrophage |
Association with transcript: | 42bp_to_ENST00000248899, ENST00000397147, ENST00000447071, NM_000631, NM_013416, uc003apy.3, uc003apz.3_5end |
EntrezGene: | NCF4 |
HGNC: | 7662 |
UniProt: | Q15080A8K4F9B0QY04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-60 | 98 |
blood island | 1.05e-60 | 98 |
hemolymphoid system | 5.71e-55 | 108 |
bone marrow | 4.23e-47 | 76 |
immune system | 8.82e-43 | 93 |
bone element | 1.03e-41 | 82 |
skeletal element | 1.10e-35 | 90 |
skeletal system | 1.41e-29 | 100 |
lateral plate mesoderm | 8.79e-20 | 203 |
blood | 9.63e-13 | 15 |
haemolymphatic fluid | 9.63e-13 | 15 |
organism substance | 9.63e-13 | 15 |
connective tissue | 1.11e-12 | 371 |
musculoskeletal system | 3.44e-11 | 167 |
adult organism | 1.28e-09 | 114 |
mesoderm | 5.78e-07 | 315 |
mesoderm-derived structure | 5.78e-07 | 315 |
presumptive mesoderm | 5.78e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.48e-18 | 39 |
myeloid leukemia | 5.33e-18 | 31 |
hematologic cancer | 2.59e-16 | 51 |
immune system cancer | 2.59e-16 | 51 |