FFCP PHASE1:Hg19::chr19:15728879..15728890,+: Difference between revisions
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|id=chr19:15728879..15728890,+
|short_description=p@chr19:15728879..15728890,+
|description=CAGE_peak_at_chr19:15728879..15728890,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:15728879..15728890,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_at_chr19:15728879..15728890,+ | |||
|id=chr19:15728879..15728890,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.67e-12!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.23e-66;1!UBERON:0007297;3.61e-34;2!UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.09e-30!3;UBERON:0004054!1.09e-30!3;UBERON:0000998!1.07e-23!1;UBERON:0006868!1.07e-23!1;UBERON:0001000!1.34e-23!1;UBERON:0005352!1.34e-23!1;UBERON:0000989!2.10e-23!1;UBERON:0008811!2.10e-23!1;UBERON:0006258!2.10e-23!1;UBERON:0005876!2.10e-23!1;UBERON:0004874!2.10e-23!1;UBERON:0005904!2.63e-23!4;UBERON:0003135!6.80e-19!11;UBERON:0003101!1.51e-16!22;UBERON:0000079!1.51e-16!22;UBERON:0001255!2.90e-12!2;UBERON:0001556!2.90e-12!2;UBERON:0003064!5.87e-10!37;UBERON:0003937!2.29e-08!12;UBERON:0005399!2.29e-08!12;UBERON:0000162!3.24e-07!14;UBERON:0001353!3.24e-07!14;UBERON:0000163!3.24e-07!14;UBERON:0006866!3.24e-07!14;UBERON:0000164!3.24e-07!14;UBERON:0000931!3.24e-07!14;UBERON:0004122!8.58e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.24e-88;3!UBERON:0004054;6.24e-88;3!UBERON:0000998;1.23e-66;1!UBERON:0006868;1.23e-66;1!UBERON:0001000;2.39e-66;1!UBERON:0005352;2.39e-66;1!UBERON:0005904;2.40e-66;4!UBERON:0000058;2.08e-27;10!UBERON:0003135;4.86e-25;11!UBERON:0004175;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22!UBERON:0000473;1.24e-09;8!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0000998,1.23e-66,1;UBERON:0006868,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,4.86e-25,11;UBERON:0000058,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0004175,1.03e-11,25;UBERON:0000473,1.24e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr19:15728879..15728890,+ | |||
}} | }} |
Latest revision as of 04:35, 26 July 2015
Short description: | p@chr19:15728879..15728890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:15728879..15728890, + |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
seminal vesicle | 1.23e-66 | 1 |
seminal fluid secreting gland | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 4.86e-25 | 11 |
duct | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
internal genitalia | 1.03e-11 | 25 |
testis | 1.24e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |