FFCP PHASE1:Hg19::chr2:162929909..162929932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:162929909..162929932,+ | |||
|coexpression_cluster_id=C1265 | |coexpression_cluster_id=C1265 | ||
|description=CAGE_peak_at_chr2:162929909..162929932,+ | |description=CAGE_peak_at_chr2:162929909..162929932,+ | ||
|id=chr2:162929909..162929932,+ | |id=chr2:162929909..162929932,+ | ||
|ontology_enrichment_celltype=CL:0000680!5.67e-10!57;CL:0000056!5.67e-10!57;CL:0000355!5.67e-10!57;CL:0000187!2.99e-08!54;CL:0000192!3.78e-08!42;CL:0000514!3.78e-08!42;CL:0000393!3.16e-07!60;CL:0000211!3.16e-07!60;CL:0002494!4.36e-07!16;CL:0000183!6.81e-07!59 | |ontology_enrichment_celltype=CL:0000680!5.67e-10!57;CL:0000056!5.67e-10!57;CL:0000355!5.67e-10!57;CL:0000187!2.99e-08!54;CL:0000192!3.78e-08!42;CL:0000514!3.78e-08!42;CL:0000393!3.16e-07!60;CL:0000211!3.16e-07!60;CL:0002494!4.36e-07!16;CL:0000183!6.81e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000569;5.76e-11;4!CL:0000134;3.51e-08;55!CL:0000048;6.06e-08;58!CL:0000723;1.71e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.58e-11,4;CL:0000011,7.58e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000011;5.76e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!3.55e-09!14 | |ontology_enrichment_disease=DOID:2394!3.55e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.04e-18;14!DOID:120;4.27e-09;27!DOID:193;2.21e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.32e-18,14;DOID:120,4.80e-09,27;DOID:193,2.46e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0002385!3.68e-08!63;UBERON:0001015!3.68e-08!63;UBERON:0000383!3.68e-08!63;UBERON:0004290!9.41e-08!70;UBERON:0004872!1.55e-07!84 | |ontology_enrichment_uberon=UBERON:0001134!1.02e-08!61;UBERON:0002036!1.02e-08!61;UBERON:0003082!1.02e-08!61;UBERON:0002385!3.68e-08!63;UBERON:0001015!3.68e-08!63;UBERON:0000383!3.68e-08!63;UBERON:0004290!9.41e-08!70;UBERON:0004872!1.55e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;5.46e-14;5!UBERON:0000991;5.35e-12;21!UBERON:0000992;2.28e-11;13!UBERON:0001829;1.39e-09;2!UBERON:0005406;1.39e-09;2!UBERON:0001044;3.54e-07;6!UBERON:0003293;3.54e-07;6!UBERON:0003294;3.54e-07;6!UBERON:0010047;3.54e-07;6!UBERON:0003408;3.54e-07;6!UBERON:0000167;3.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,5.14e-14,5;UBERON:0000991,5.96e-12,21;UBERON:0009196,5.96e-12,21;UBERON:0009117,5.96e-12,21;UBERON:0005564,5.96e-12,21;UBERON:0004176,2.37e-11,22;UBERON:0000992,2.83e-11,13;UBERON:0005406,7.52e-10,2;UBERON:0001829,1.40e-09,2;UBERON:0001044,3.37e-07,6;UBERON:0003293,3.37e-07,6;UBERON:0003294,3.37e-07,6;UBERON:0010047,3.37e-07,6;UBERON:0000167,3.37e-07,6 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,1.00311897234407,0.32592226663359,0.946895611469467,0,0.334231370655521,0,0.221533894583621,0.541607727530031,0.640456598628376,0.390178042679635,2.13769275984779,1.65810010671509,2.02862160014537,1.18629250529648,1.33770414044857,0,0.679856056185397,0.383220493601921,0.34362744548263,0.759059076058509,1.27426165729639,0,0,0.602300476311091,0.895906278080929,2.49861453104692,0,0.821127996921047,0.604820229674197,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.506522046658319,9.40105183773854,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635795703478686,0,0.618315175430633,0,0,0.168776332241266,0,0,0.552299391853796,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.50496973370552,0.190493682876507,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0.791951872933429,3.01439377059586,2.61460037580088,1.29964888536674,0,0.502257091432126,0,0,0,0,0.434343920002738,0.821905290201534,0.895304816199478,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0,0,0.512556597022804,0,0,1.48418066444991,0.462629081407967,0.532685175939381,0.657017248110473,2.07701771673448,0.348631135379878,0.120859449591622,0,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.462145851343933,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0,0.286249773483982,0,0.316379424718726,0.571890581771475,0.511795582622668,0,0.318203247925937,0,1.43897966066652,0.54907405947211,0.353437207037059,0.404364963146632,0,0.421258456238981,0,1.94970791705028,0,0,0.848432591722276,1.13008116620243,0,0,0.876901770507525,0.578775534266688,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,1.68886108238131,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.13929437434833,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.16856654923612,3.32883516901568,0.947015026375446,1.0062716070103,2.66943366478961,1.14420034198462,4.38569678913393,0.15543720058278,2.21782724984451,1.11507737014592,0,0.621051827505038,1.24411862352257,0.797525143673985,0,1.35231848097497,4.56966254602554,0.406870733204662,1.09109195521536,1.07410557042488,1.85613503951397,1.99047944349308,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.957803154342908,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.206686796501184,0.253663240775627,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.328863867814245,0,0.222462803784138,0.156986185701028,0,0,0,0,0,0,0.158013611732727,0,0,1.60342272946051,0,0,0,2.58136415292167,0,0.0852134047591577,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,1.83491713361816,0,0,0.135982980381829,0,0,1.85997509083376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0,1.00311897234407,0.32592226663359,0.946895611469467,0,0.334231370655521,0,0.221533894583621,0.541607727530031,0.640456598628376,0.390178042679635,2.13769275984779,1.65810010671509,2.02862160014537,1.18629250529648,1.33770414044857,0,0.679856056185397,0.383220493601921,0.34362744548263,0.759059076058509,1.27426165729639,0,0,0.602300476311091,0.895906278080929,2.49861453104692,0,0.821127996921047,0.604820229674197,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.506522046658319,9.40105183773854,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635795703478686,0,0.618315175430633,0,0,0.168776332241266,0,0,0.552299391853796,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.50496973370552,0.190493682876507,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.710783897485092,0.791951872933429,3.01439377059586,2.61460037580088,1.29964888536674,0,0.502257091432126,0,0,0,0,0.434343920002738,0.821905290201534,0.895304816199478,0,0.394061520403854,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0,0,0.512556597022804,0,0,1.48418066444991,0.462629081407967,0.532685175939381,0.657017248110473,2.07701771673448,0.348631135379878,0.120859449591622,0,0,0.229628896329213,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.462145851343933,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0,0.286249773483982,0,0.316379424718726,0.571890581771475,0.511795582622668,0,0.318203247925937,0,1.43897966066652,0.54907405947211,0.353437207037059,0.404364963146632,0,0.421258456238981,0,1.94970791705028,0,0,0.848432591722276,1.13008116620243,0,0,0.876901770507525,0.578775534266688,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,1.68886108238131,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,1.13929437434833,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0,0,0,0,0,0,0,0,0,0.597019211547496,1.16856654923612,3.32883516901568,0.947015026375446,1.0062716070103,2.66943366478961,1.14420034198462,4.38569678913393,0.15543720058278,2.21782724984451,1.11507737014592,0,0.621051827505038,1.24411862352257,0.797525143673985,0,1.35231848097497,4.56966254602554,0.406870733204662,1.09109195521536,1.07410557042488,1.85613503951397,1.99047944349308,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.957803154342908,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0.781078098613847,0.206686796501184,0.253663240775627,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.328863867814245,0,0.222462803784138,0.156986185701028,0,0,0,0,0,0,0.158013611732727,0,0,1.60342272946051,0,0,0,2.58136415292167,0,0.0852134047591577,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,1.83491713361816,0,0,0.135982980381829,0,0,1.85997509083376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p@chr2:162929909..162929932,+ | |short_description=p@chr2:162929909..162929932,+ | ||
}} | }} |
Latest revision as of 01:57, 29 July 2015
Short description: | p@chr2:162929909..162929932, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162929909..162929932, + |
Coexpression cluster: | C1265_Fibroblast_Mesothelial_mesenchymal_anaplastic_CD4_Sertoli_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.58e-11 | 4 |
migratory trunk neural crest cell | 7.58e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 5.14e-14 | 5 |
gonad | 5.96e-12 | 21 |
indifferent external genitalia | 5.96e-12 | 21 |
indifferent gonad | 5.96e-12 | 21 |
gonad primordium | 5.96e-12 | 21 |
external genitalia | 2.37e-11 | 22 |
female gonad | 2.83e-11 | 13 |
perirenal fat | 7.52e-10 | 2 |
major salivary gland | 1.40e-09 | 2 |
saliva-secreting gland | 3.37e-07 | 6 |
gland of oral region | 3.37e-07 | 6 |
gland of foregut | 3.37e-07 | 6 |
oral gland | 3.37e-07 | 6 |
oral cavity | 3.37e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.32e-18 | 14 |
female reproductive organ cancer | 4.80e-09 | 27 |
reproductive organ cancer | 2.46e-08 | 29 |