FFCP PHASE1:Hg19::chr2:45169317..45169326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_AB464210,BC153026_5end | |association_with_transcript=75bp_to_AB464210,BC153026_5end | ||
|cluster_id=chr2:45169317..45169326,+ | |||
|coexpression_cluster_id=C1905 | |coexpression_cluster_id=C1905 | ||
|description=CAGE_peak_13_at_SIX3_5end | |description=CAGE_peak_13_at_SIX3_5end | ||
|id=chr2:45169317..45169326,+ | |id=chr2:45169317..45169326,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.34e-08!3;CL:0005012!1.34e-08!3;CL:0000067!1.34e-08!3;CL:0002304!1.34e-08!3;CL:0002586!1.51e-08!3 | |ontology_enrichment_celltype=CL:0000064!1.34e-08!3;CL:0005012!1.34e-08!3;CL:0000067!1.34e-08!3;CL:0002304!1.34e-08!3;CL:0002586!1.51e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.14e-24;3!CL:0000067;1.14e-24;3!CL:0005012;1.14e-24;3!CL:0002304;1.14e-24;3!CL:0002586;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.14e-24,3;CL:0000067,1.14e-24,3;CL:0005012,1.14e-24,3;CL:0002304,1.14e-24,3;CL:0002586,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.57e-37;2!UBERON:0003056;1.93e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005383;4.16e-55;3!UBERON:0005382;4.16e-55;3!UBERON:0000369;1.46e-41;4!UBERON:0002435;1.46e-41;4!UBERON:0000204;1.46e-41;4!UBERON:0001873;1.57e-37;2!UBERON:0007625;2.65e-26;11!UBERON:0001778;1.14e-24;3!UBERON:0001775;1.14e-24;3!UBERON:0009663;4.14e-24;7!UBERON:0000019;1.04e-23;19!UBERON:0000047;1.04e-23;19!UBERON:0004088;1.04e-23;19!UBERON:0010230;1.04e-23;19!UBERON:0000970;1.56e-22;20!UBERON:0002104;1.80e-21;21!UBERON:0001456;1.80e-21;21!UBERON:0000020;1.27e-19;23!UBERON:0001874;1.88e-19;1!UBERON:0002420;6.40e-19;9!UBERON:0000125;6.40e-19;9!UBERON:0007245;6.40e-19;9!UBERON:0002308;6.40e-19;9!UBERON:0010009;6.40e-19;9!UBERON:0010011;6.40e-19;9!UBERON:0000454;6.40e-19;9!UBERON:0001032;8.19e-19;24!UBERON:0004456;8.19e-19;24!UBERON:0000488;8.88e-19;4!UBERON:0000966;1.88e-15;5!UBERON:0005388;1.88e-15;5!UBERON:0001802;1.88e-15;5!UBERON:0002203;7.33e-13;6!UBERON:0001768;7.33e-13;6!UBERON:0002200;7.33e-13;6!UBERON:0001801;3.58e-12;14!UBERON:0000007;2.07e-10;2!UBERON:0010371;1.66e-09;31!UBERON:0006876;1.96e-07;11!UBERON:0001781;2.97e-07;3!UBERON:0001782;2.97e-07;3 | |||
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|short_description=p13@SIX3 | |short_description=p13@SIX3 | ||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p13@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | 75bp_to_AB464210, BC153026_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.14e-24 | 3 |
ciliated epithelial cell | 1.14e-24 | 3 |
multi-ciliated epithelial cell | 1.14e-24 | 3 |
non-pigmented ciliary epithelial cell | 1.14e-24 | 3 |
retinal pigment epithelial cell | 2.79e-07 | 3 |