FFCP PHASE1:Hg19::chr19:19516561..19516644,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:19516561..19516644,+
|short_description=p1@GATAD2A
|description=CAGE_peak_1_at_GATAD2A_5end
|association_with_transcript=0bp_to_ENST00000457895_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54815 | |EntrezGene=54815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29989 | |HGNC=29989 | ||
|TSSclassifier=strong | |||
|UniProt=C9JHD7 | |UniProt=C9JHD7 | ||
|association_with_transcript=0bp_to_ENST00000457895_5end | |||
|cluster_id=chr19:19516561..19516644,+ | |||
|description=CAGE_peak_1_at_GATAD2A_5end | |||
|id=chr19:19516561..19516644,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.19e-09!248;CL:0000220!1.42e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.69e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.05e-09!51;DOID:0060083!2.05e-09!51;DOID:1240!9.57e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.05e-09,51;DOID:0060083,2.05e-09,51;DOID:1240,9.57e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001981!3.85e-08!60;UBERON:0007500!3.85e-08!60;UBERON:0004537!3.85e-08!60;UBERON:0006965!3.85e-08!60;UBERON:0000055!7.81e-08!69;UBERON:0003914!3.68e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,3.29e-08,59;UBERON:0001981,3.29e-08,59;UBERON:0004537,3.29e-08,59;UBERON:0006965,3.29e-08,59;UBERON:0000055,6.92e-08,68;UBERON:0003914,5.06e-07,117 | |||
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| ||
|short_description=p1@GATAD2A | |||
}} | }} |
Latest revision as of 19:56, 16 September 2015
Short description: | p1@GATAD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GATAD2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457895_5end |
EntrezGene: | GATAD2A |
HGNC: | 29989 |
UniProt: | C9JHD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.69e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 3.29e-08 | 59 |
blood vessel | 3.29e-08 | 59 |
blood vasculature | 3.29e-08 | 59 |
vascular cord | 3.29e-08 | 59 |
vessel | 6.92e-08 | 68 |
epithelial tube | 5.06e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.05e-09 | 51 |
immune system cancer | 2.05e-09 | 51 |
leukemia | 9.57e-08 | 39 |