FFCP PHASE1:Hg19::chr2:5832437..5832439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6664 | |EntrezGene=6664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11191 | |HGNC=11191 | ||
|TSSclassifier=strong | |||
|UniProt=P35716 | |UniProt=P35716 | ||
|association_with_transcript=-359bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | |association_with_transcript=-359bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | ||
|cluster_id=chr2:5832437..5832439,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_6_at_SOX11_5end | |description=CAGE_peak_6_at_SOX11_5end | ||
|id=chr2:5832437..5832439,+ | |id=chr2:5832437..5832439,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.86e-12!6;CL:0000031!7.86e-12!6;CL:0000404!7.86e-12!6;CL:0000064!2.16e-10!3;CL:0005012!2.16e-10!3;CL:0000067!2.16e-10!3;CL:0002304!2.16e-10!3;CL:0000133!4.60e-10!59;CL:0000047!5.44e-09!8;CL:0000221!3.85e-08!71 | |ontology_enrichment_celltype=CL:0000540!7.86e-12!6;CL:0000031!7.86e-12!6;CL:0000404!7.86e-12!6;CL:0000064!2.16e-10!3;CL:0005012!2.16e-10!3;CL:0000067!2.16e-10!3;CL:0002304!2.16e-10!3;CL:0000133!4.60e-10!59;CL:0000047!5.44e-09!8;CL:0000221!3.85e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.35e-49;6!CL:0000404;1.35e-49;6!CL:0002319;1.02e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.46e-49,6;CL:0000031,1.46e-49,6;CL:0000404,1.46e-49,6;CL:0000047,1.95e-37,8;CL:0002319,1.04e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.35e-49;6 | |||
|ontology_enrichment_disease=DOID:171!1.35e-11!10;DOID:169!3.78e-11!6 | |ontology_enrichment_disease=DOID:171!1.35e-11!10;DOID:169!3.78e-11!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000013!2.86e-13!5;UBERON:0002410!2.86e-13!5;UBERON:0001778!2.16e-10!3;UBERON:0001775!2.16e-10!3;UBERON:0000924!1.57e-08!173;UBERON:0006601!1.57e-08!173;UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1;UBERON:0000488!5.24e-08!4;UBERON:0004121!1.29e-07!169;UBERON:0000010!1.36e-07!8;UBERON:0000073!4.41e-07!94;UBERON:0001016!4.41e-07!94 | |ontology_enrichment_uberon=UBERON:0000013!2.86e-13!5;UBERON:0002410!2.86e-13!5;UBERON:0001778!2.16e-10!3;UBERON:0001775!2.16e-10!3;UBERON:0000924!1.57e-08!173;UBERON:0006601!1.57e-08!173;UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1;UBERON:0000488!5.24e-08!4;UBERON:0004121!1.29e-07!169;UBERON:0000010!1.36e-07!8;UBERON:0000073!4.41e-07!94;UBERON:0001016!4.41e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.96e-12;2!UBERON:0002108;5.54e-08;4!UBERON:0002021;5.54e-08;5!UBERON:0000922;2.10e-07;49!UBERON:0001950;2.69e-07;20!UBERON:0002619;9.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,1.85e-12,2;UBERON:0001017,2.22e-10,81;UBERON:0001016,2.09e-09,89;UBERON:0002108,5.35e-08,4;UBERON:0002021,5.73e-08,5;UBERON:0001950,2.69e-07,20;UBERON:0002619,9.67e-07,22 | |||
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|short_description=p6@SOX11 | |short_description=p6@SOX11 | ||
}} | }} |
Latest revision as of 19:11, 17 September 2015
Short description: | p6@SOX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SOX11_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -359bp_to_ENST00000322002, NM_003108, uc002qyj.2_5end |
EntrezGene: | SOX11 |
HGNC: | 11191 |
UniProt: | P35716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.46e-49 | 6 |
neuroblast | 1.46e-49 | 6 |
electrically signaling cell | 1.46e-49 | 6 |
neuronal stem cell | 1.95e-37 | 8 |
neural cell | 1.04e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
duodenum | 1.85e-12 | 2 |
central nervous system | 2.22e-10 | 81 |
nervous system | 2.09e-09 | 89 |
small intestine | 5.35e-08 | 4 |
occipital lobe | 5.73e-08 | 5 |
neocortex | 2.69e-07 | 20 |
regional part of cerebral cortex | 9.67e-07 | 22 |