FFCP PHASE1:Hg19::chr19:2248132..2248143,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:2248132..2248143,+
|short_description=p@chr19:2248132..2248143,+
|description=CAGE_peak_at_chr19:2248132..2248143,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:2248132..2248143,+ | |||
|description=CAGE_peak_at_chr19:2248132..2248143,+ | |||
|id=chr19:2248132..2248143,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.91e-15;2!CL:1000398;1.91e-15;2!CL:0000746;6.73e-11;3!CL:0000737;1.70e-08;4!CL:0002188;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.54e-15,2;CL:1000398,1.54e-15,2;CL:0000746,6.73e-11,3;CL:0000513,6.73e-11,3;CL:0000737,1.70e-08,4;CL:0002188,6.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000513;6.73e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.91e-15;2!UBERON:0003497;1.91e-15;2!UBERON:0003909;1.91e-15;2!UBERON:0003835;1.91e-15;2!UBERON:0001280;9.43e-11;3!UBERON:0004647;9.43e-11;3!UBERON:0000353;1.59e-08;15!UBERON:0002107;6.38e-07;19!UBERON:0006925;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.54e-15,2;UBERON:0003497,1.54e-15,2;UBERON:0003909,1.54e-15,2;UBERON:0003835,1.54e-15,2;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0000353,1.53e-08,15;UBERON:0000058,6.19e-07,19;UBERON:0002107,6.38e-07,19;UBERON:0006925,6.38e-07,19;UBERON:0008836,6.38e-07,19 | |||
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| ||
|short_description=p@chr19:2248132..2248143,+ | |||
}} | }} |
Latest revision as of 05:46, 26 July 2015
Short description: | p@chr19:2248132..2248143, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2248132..2248143, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.54e-15 | 2 |
endothelial cell of hepatic sinusoid | 1.54e-15 | 2 |
cardiac muscle cell | 6.73e-11 | 3 |
cardiac muscle myoblast | 6.73e-11 | 3 |
striated muscle cell | 1.70e-08 | 4 |
glomerular endothelial cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.54e-15 | 2 |
abdomen blood vessel | 1.54e-15 | 2 |
sinusoid | 1.54e-15 | 2 |
abdominal segment blood vessel | 1.54e-15 | 2 |
liver parenchyma | 8.17e-11 | 3 |
liver lobule | 8.17e-11 | 3 |
hepatic duct | 8.17e-11 | 3 |
parenchyma | 1.53e-08 | 15 |
duct | 6.19e-07 | 19 |
liver | 6.38e-07 | 19 |
digestive gland | 6.38e-07 | 19 |
liver bud | 6.38e-07 | 19 |