FFCP PHASE1:Hg19::chr19:2353015..2353053,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:2353015..2353053,+
|short_description=p@chr19:2353015..2353053,+
|description=CAGE_peak_at_chr19:2353015..2353053,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:2353015..2353053,+ | |||
|coexpression_cluster_id=C558 | |||
|description=CAGE_peak_at_chr19:2353015..2353053,+ | |||
|id=chr19:2353015..2353053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.74e-12;3!CL:0002577;2.74e-12;3!CL:1000306;1.50e-09;4!CL:0002547;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.31e-12,3;CL:0002567,2.89e-12,3;CL:1000306,1.44e-09,4;CL:0002547,1.44e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.86e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0003101!8.76e-07!22;UBERON:0000079!8.76e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.50e-09;4!UBERON:0004797;1.50e-09;4!UBERON:0000415;1.50e-09;4!UBERON:0007240;1.50e-09;4!UBERON:0005742;1.50e-09;4!UBERON:0005734;1.50e-09;4!UBERON:0004664;1.50e-09;4!UBERON:0004663;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0000415,1.44e-09,4;UBERON:0007240,1.44e-09,4;UBERON:0005742,1.44e-09,4;UBERON:0005734,1.44e-09,4;UBERON:0004664,1.44e-09,4;UBERON:0004663,1.44e-09,4 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0,0.829312462163088,0.144119953416961,0.50496973370552,0,0,1.17217447210047,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0.40101294060657,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0.456469358066384,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.879313402068495,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0.397901550322736,0,0.22589216407792,0,0,0.231522474323834,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,5.83495976280443,0.267964130156178,0,0,0.213233981900981,0,0.581300188524055,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0,0.244209805832924,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0,0.829312462163088,0.144119953416961,0.50496973370552,0,0,1.17217447210047,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0.232420756919918,0,0.40101294060657,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0.324621940274555,0,0.456469358066384,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.269272933229316,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0.879313402068495,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0.397901550322736,0,0.22589216407792,0,0,0.231522474323834,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,5.83495976280443,0.267964130156178,0,0,0.213233981900981,0,0.581300188524055,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0.342233301085281,0,0.143444410785353,0,0.244209805832924,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr19:2353015..2353053,+ | |||
}} | }} |
Latest revision as of 05:50, 26 July 2015
Short description: | p@chr19:2353015..2353053, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2353015..2353053, + |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.31e-12 | 3 |
light melanocyte | 2.89e-12 | 3 |
fibroblast of tunica adventitia of artery | 1.44e-09 | 4 |
fibroblast of the aortic adventitia | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
artery wall | 1.44e-09 | 4 |
tunica adventitia of artery | 1.44e-09 | 4 |
adventitia | 1.44e-09 | 4 |
tunica adventitia of blood vessel | 1.44e-09 | 4 |
aorta tunica adventitia | 1.44e-09 | 4 |
aorta wall | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.27e-17 | 2 |