FFCP PHASE1:Hg19::chr3:139258443..139258485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5947 | |EntrezGene=5947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9919 | |HGNC=9919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_uc010huj.2_5end | |association_with_transcript=185bp_to_uc010huj.2_5end | ||
|cluster_id=chr3:139258443..139258485,- | |||
|coexpression_cluster_id=C1921 | |coexpression_cluster_id=C1921 | ||
|description=CAGE_peak_1_at_RBP1_5end | |description=CAGE_peak_1_at_RBP1_5end | ||
|id=chr3:139258443..139258485,- | |id=chr3:139258443..139258485,- | ||
|ontology_enrichment_celltype=CL:0002321!3.39e-12!248;CL:0000220!1.08e-11!246;CL:1000449!5.65e-08!16;CL:0000221!1.57e-07!71;CL:0002319!2.68e-07!25;CL:0000393!6.39e-07!60;CL:0000211!6.39e-07!60 | |ontology_enrichment_celltype=CL:0002321!3.39e-12!248;CL:0000220!1.08e-11!246;CL:1000449!5.65e-08!16;CL:0000221!1.57e-07!71;CL:0002319!2.68e-07!25;CL:0000393!6.39e-07!60;CL:0000211!6.39e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.32e-08;15!CL:0002319;1.09e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.35e-11,250;CL:1000449,2.80e-08,15;CL:0002319,1.10e-07,25;CL:0000221,1.41e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.09e-30!312;UBERON:0000481!9.62e-30!347;UBERON:0000483!9.67e-29!309;UBERON:0000475!2.25e-26!365;UBERON:0000924!1.55e-24!173;UBERON:0006601!1.55e-24!173;UBERON:0005743!3.23e-24!86;UBERON:0004121!4.48e-24!169;UBERON:0004111!5.13e-24!241;UBERON:0000073!4.49e-23!94;UBERON:0001016!4.49e-23!94;UBERON:0000477!8.52e-23!286;UBERON:0000033!2.62e-22!123;UBERON:0001017!8.04e-22!82;UBERON:0002346!1.47e-21!90;UBERON:0000025!2.32e-21!194;UBERON:0003075!2.76e-21!86;UBERON:0007284!2.76e-21!86;UBERON:0000153!2.84e-21!129;UBERON:0007811!2.84e-21!129;UBERON:0000922!3.25e-20!612;UBERON:0000468!4.54e-19!659;UBERON:0002050!2.40e-17!605;UBERON:0005423!2.40e-17!605;UBERON:0000955!3.41e-17!69;UBERON:0006238!3.41e-17!69;UBERON:0000923!6.37e-17!604;UBERON:0005291!6.37e-17!604;UBERON:0006598!6.37e-17!604;UBERON:0002532!6.37e-17!604;UBERON:0000467!1.58e-15!625;UBERON:0000480!2.86e-15!626;UBERON:0002616!3.31e-15!59;UBERON:0003056!5.59e-15!61;UBERON:0001049!1.66e-14!57;UBERON:0005068!1.66e-14!57;UBERON:0006241!1.66e-14!57;UBERON:0007135!1.66e-14!57;UBERON:0000064!2.79e-14!219;UBERON:0005256!9.61e-13!143;UBERON:0000466!1.35e-12!126;UBERON:0000062!3.25e-12!511;UBERON:0001048!6.93e-11!168;UBERON:0007023!3.05e-10!115;UBERON:0000464!9.69e-10!104;UBERON:0002553!1.56e-09!70;UBERON:0002780!1.94e-09!41;UBERON:0001890!1.94e-09!41;UBERON:0006240!1.94e-09!41;UBERON:0003886!2.43e-09!63;UBERON:0003080!2.45e-09!42;UBERON:0003104!2.65e-09!238;UBERON:0009142!2.65e-09!238;UBERON:0005177!3.72e-09!107;UBERON:0002100!5.34e-09!216;UBERON:0003914!5.84e-09!118;UBERON:0003103!9.79e-09!69;UBERON:0003064!1.79e-08!37;UBERON:0001032!2.00e-08!24;UBERON:0004456!2.00e-08!24;UBERON:0000080!2.50e-08!18;UBERON:0002120!2.50e-08!18;UBERON:0004875!2.50e-08!18;UBERON:0005721!2.50e-08!18;UBERON:0005754!2.50e-08!18;UBERON:0007297!2.50e-08!18;UBERON:0006555!2.63e-08!17;UBERON:0005103!2.63e-08!17;UBERON:0000083!2.63e-08!17;UBERON:0009201!2.63e-08!17;UBERON:0004819!2.63e-08!17;UBERON:0006553!2.63e-08!17;UBERON:0003074!2.63e-08!17;UBERON:0003060!2.63e-08!17;UBERON:0000020!3.81e-08!23;UBERON:0004211!5.65e-08!16;UBERON:0001285!5.65e-08!16;UBERON:0007684!5.65e-08!16;UBERON:0003220!5.65e-08!16;UBERON:0004208!5.65e-08!16;UBERON:0002104!7.19e-08!21;UBERON:0003887!8.54e-08!21;UBERON:0002020!9.51e-08!34;UBERON:0003528!9.51e-08!34;UBERON:0001893!1.11e-07!34;UBERON:0000970!1.36e-07!20;UBERON:0002791!1.55e-07!33;UBERON:0001869!3.12e-07!32;UBERON:0004876!3.70e-07!20;UBERON:0005172!4.03e-07!55;UBERON:0005173!4.03e-07!55;UBERON:0000019!4.21e-07!19;UBERON:0000047!4.21e-07!19;UBERON:0004088!4.21e-07!19;UBERON:0003072!4.21e-07!19;UBERON:0003071!4.21e-07!19;UBERON:0004128!4.21e-07!19;UBERON:0007625!5.90e-07!11;UBERON:0001456!7.38e-07!21;UBERON:0003076!8.05e-07!15;UBERON:0003057!8.05e-07!15 | |ontology_enrichment_uberon=UBERON:0000119!8.09e-30!312;UBERON:0000481!9.62e-30!347;UBERON:0000483!9.67e-29!309;UBERON:0000475!2.25e-26!365;UBERON:0000924!1.55e-24!173;UBERON:0006601!1.55e-24!173;UBERON:0005743!3.23e-24!86;UBERON:0004121!4.48e-24!169;UBERON:0004111!5.13e-24!241;UBERON:0000073!4.49e-23!94;UBERON:0001016!4.49e-23!94;UBERON:0000477!8.52e-23!286;UBERON:0000033!2.62e-22!123;UBERON:0001017!8.04e-22!82;UBERON:0002346!1.47e-21!90;UBERON:0000025!2.32e-21!194;UBERON:0003075!2.76e-21!86;UBERON:0007284!2.76e-21!86;UBERON:0000153!2.84e-21!129;UBERON:0007811!2.84e-21!129;UBERON:0000922!3.25e-20!612;UBERON:0000468!4.54e-19!659;UBERON:0002050!2.40e-17!605;UBERON:0005423!2.40e-17!605;UBERON:0000955!3.41e-17!69;UBERON:0006238!3.41e-17!69;UBERON:0000923!6.37e-17!604;UBERON:0005291!6.37e-17!604;UBERON:0006598!6.37e-17!604;UBERON:0002532!6.37e-17!604;UBERON:0000467!1.58e-15!625;UBERON:0000480!2.86e-15!626;UBERON:0002616!3.31e-15!59;UBERON:0003056!5.59e-15!61;UBERON:0001049!1.66e-14!57;UBERON:0005068!1.66e-14!57;UBERON:0006241!1.66e-14!57;UBERON:0007135!1.66e-14!57;UBERON:0000064!2.79e-14!219;UBERON:0005256!9.61e-13!143;UBERON:0000466!1.35e-12!126;UBERON:0000062!3.25e-12!511;UBERON:0001048!6.93e-11!168;UBERON:0007023!3.05e-10!115;UBERON:0000464!9.69e-10!104;UBERON:0002553!1.56e-09!70;UBERON:0002780!1.94e-09!41;UBERON:0001890!1.94e-09!41;UBERON:0006240!1.94e-09!41;UBERON:0003886!2.43e-09!63;UBERON:0003080!2.45e-09!42;UBERON:0003104!2.65e-09!238;UBERON:0009142!2.65e-09!238;UBERON:0005177!3.72e-09!107;UBERON:0002100!5.34e-09!216;UBERON:0003914!5.84e-09!118;UBERON:0003103!9.79e-09!69;UBERON:0003064!1.79e-08!37;UBERON:0001032!2.00e-08!24;UBERON:0004456!2.00e-08!24;UBERON:0000080!2.50e-08!18;UBERON:0002120!2.50e-08!18;UBERON:0004875!2.50e-08!18;UBERON:0005721!2.50e-08!18;UBERON:0005754!2.50e-08!18;UBERON:0007297!2.50e-08!18;UBERON:0006555!2.63e-08!17;UBERON:0005103!2.63e-08!17;UBERON:0000083!2.63e-08!17;UBERON:0009201!2.63e-08!17;UBERON:0004819!2.63e-08!17;UBERON:0006553!2.63e-08!17;UBERON:0003074!2.63e-08!17;UBERON:0003060!2.63e-08!17;UBERON:0000020!3.81e-08!23;UBERON:0004211!5.65e-08!16;UBERON:0001285!5.65e-08!16;UBERON:0007684!5.65e-08!16;UBERON:0003220!5.65e-08!16;UBERON:0004208!5.65e-08!16;UBERON:0002104!7.19e-08!21;UBERON:0003887!8.54e-08!21;UBERON:0002020!9.51e-08!34;UBERON:0003528!9.51e-08!34;UBERON:0001893!1.11e-07!34;UBERON:0000970!1.36e-07!20;UBERON:0002791!1.55e-07!33;UBERON:0001869!3.12e-07!32;UBERON:0004876!3.70e-07!20;UBERON:0005172!4.03e-07!55;UBERON:0005173!4.03e-07!55;UBERON:0000019!4.21e-07!19;UBERON:0000047!4.21e-07!19;UBERON:0004088!4.21e-07!19;UBERON:0003072!4.21e-07!19;UBERON:0003071!4.21e-07!19;UBERON:0004128!4.21e-07!19;UBERON:0007625!5.90e-07!11;UBERON:0001456!7.38e-07!21;UBERON:0003076!8.05e-07!15;UBERON:0003057!8.05e-07!15 | ||
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| ||
|short_description=p1@RBP1 | |short_description=p1@RBP1 | ||
}} | }} |
Latest revision as of 02:02, 25 September 2015
Short description: | p1@RBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBP1_5end |
Coexpression cluster: | C1921_small_Renal_Ciliary_Astrocyte_Lens_Meningeal_maxillary |
Association with transcript: | 185bp_to_uc010huj.2_5end |
EntrezGene: | RBP1 |
HGNC: | 9919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.35e-11 | 250 |
epithelial cell of nephron | 2.80e-08 | 15 |
neural cell | 1.10e-07 | 25 |
ectodermal cell | 1.41e-07 | 72 |