FFCP PHASE1:Hg19::chr3:168865497..168865516,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=Q03112 | |UniProt=Q03112 | ||
|association_with_transcript=5bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | |association_with_transcript=5bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | ||
|cluster_id=chr3:168865497..168865516,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_16_at_MECOM_5end | |description=CAGE_peak_16_at_MECOM_5end | ||
|id=chr3:168865497..168865516,- | |id=chr3:168865497..168865516,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.15e-26;1!CL:0000159;6.43e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.16e-26,1;CL:0000159,6.43e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.72e-26;1!UBERON:0003918;6.13e-11;10!UBERON:0007687;6.13e-11;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;2.15e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-23!115;UBERON:0003075!6.17e-09!86;UBERON:0007284!6.17e-09!86;UBERON:0002346!3.07e-08!90;UBERON:0000477!4.17e-08!286;UBERON:0004111!1.31e-07!241;UBERON:0000025!2.70e-07!194 | |ontology_enrichment_uberon=UBERON:0007023!1.53e-23!115;UBERON:0003075!6.17e-09!86;UBERON:0007284!6.17e-09!86;UBERON:0002346!3.07e-08!90;UBERON:0000477!4.17e-08!286;UBERON:0004111!1.31e-07!241;UBERON:0000025!2.70e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.15e-26;1!UBERON:0002084;6.72e-26;1!UBERON:0002082;6.72e-26;1!UBERON:0004909;6.43e-14;2!UBERON:0004151;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.16e-26,1;UBERON:0002084,3.58e-26,1;UBERON:0002082,3.58e-26,1;UBERON:0010226,3.58e-26,1;UBERON:0004909,6.43e-14,2;UBERON:0004151,1.19e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0.44905874525234,0.225222960966644,1.53316637465883,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0.864542502924636,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0,0,1.89133697518076,2.36045646607491,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.52893040697076,0,0,1.17466153824464,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,4.47421727191169,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0.0802413666891683,1.46067277649303,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0.44905874525234,0.225222960966644,1.53316637465883,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0.438770794307945,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0.864542502924636,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0,0,1.89133697518076,2.36045646607491,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.52893040697076,0,0,1.17466153824464,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,4.47421727191169,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0.0802413666891683,1.46067277649303,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p16@MECOM | |short_description=p16@MECOM | ||
}} | }} |
Latest revision as of 14:28, 16 September 2015
Short description: | p16@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MECOM_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 5bp_to_ENST00000464456, NM_001164000, uc003ffk.2_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.16e-26 | 1 |
seromucus secreting cell | 6.43e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.16e-26 | 1 |
heart left ventricle | 3.58e-26 | 1 |
cardiac ventricle | 3.58e-26 | 1 |
future cardiac ventricle | 3.58e-26 | 1 |
epithelium of gonad | 6.43e-14 | 2 |
cardiac chamber | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.16e-26 | 1 |