FFCP PHASE1:Hg19::chr3:42977827..42977839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506243 | |EntrezGene=100506243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38708 | |HGNC=38708 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBD0 | |UniProt=C9JBD0 | ||
|association_with_transcript=0bp_to_ENST00000418093,NM_001205272_5end | |association_with_transcript=0bp_to_ENST00000418093,NM_001205272_5end | ||
|cluster_id=chr3:42977827..42977839,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_KRBOX1_5end | |description=CAGE_peak_5_at_KRBOX1_5end | ||
|id=chr3:42977827..42977839,+ | |id=chr3:42977827..42977839,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.34e-08!75;CL:0000055!7.17e-08!180 | |ontology_enrichment_celltype=CL:0000057!4.34e-08!75;CL:0000055!7.17e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.68e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.58e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.29e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.32e-10!365;UBERON:0002616!3.20e-08!59;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0000119!1.12e-07!312;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0000483!2.40e-07!309;UBERON:0000481!2.83e-07!347;UBERON:0000073!3.40e-07!94;UBERON:0001016!3.40e-07!94;UBERON:0000467!5.42e-07!625;UBERON:0005743!5.57e-07!86;UBERON:0000480!6.58e-07!626;UBERON:0001017!8.51e-07!82;UBERON:0000914!9.72e-07!83;UBERON:0002329!9.72e-07!83;UBERON:0003077!9.72e-07!83;UBERON:0003059!9.72e-07!83;UBERON:0007282!9.72e-07!83;UBERON:0009618!9.72e-07!83;UBERON:0007285!9.72e-07!83 | |ontology_enrichment_uberon=UBERON:0000475!4.32e-10!365;UBERON:0002616!3.20e-08!59;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0000119!1.12e-07!312;UBERON:0003075!1.81e-07!86;UBERON:0007284!1.81e-07!86;UBERON:0000483!2.40e-07!309;UBERON:0000481!2.83e-07!347;UBERON:0000073!3.40e-07!94;UBERON:0001016!3.40e-07!94;UBERON:0000467!5.42e-07!625;UBERON:0005743!5.57e-07!86;UBERON:0000480!6.58e-07!626;UBERON:0001017!8.51e-07!82;UBERON:0000914!9.72e-07!83;UBERON:0002329!9.72e-07!83;UBERON:0003077!9.72e-07!83;UBERON:0003059!9.72e-07!83;UBERON:0007282!9.72e-07!83;UBERON:0009618!9.72e-07!83;UBERON:0007285!9.72e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.29e-10;1!UBERON:0001785;5.29e-10;1!UBERON:0002464;5.29e-10;1!UBERON:0004904;5.29e-10;1!UBERON:0001021;5.29e-10;1!UBERON:0001987;1.33e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.06e-10,1;UBERON:0001785,4.06e-10,1;UBERON:0002464,4.06e-10,1;UBERON:0004904,4.06e-10,1;UBERON:0001021,4.06e-10,1;UBERON:0003902,4.06e-10,1;UBERON:0005425,4.06e-10,1;UBERON:0001987,6.63e-10,4;UBERON:0004340,6.63e-10,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0.873765488520689,0.263766978228454,0.123766352960047,0,0,0,1.46062018077475,0,0.61560529038394,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,7.46580730336962,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.937285727335186,0.624320153660641,0,0.448346041655403,0.704606991862589,1.13311061057692,1.40450806702248,0,0.245668634623536,0,0,0,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0,0.675105328965065,0.389748020644795,1.00973509697646,0,0.161646056818812,0.355009592516614,0.906768884048762,0.339121184620975,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.402115889646523,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.708875486211932,0.716468181622786,0.581267877027924,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,0.266422179016099,0,0,0,0,0,1.58390374586686,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0,1.81876542867756,1.66435439510497,0.30239029332968,0,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0.925258162815933,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0.460404944679482,0.229628896329213,0.546273504020151,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.54941678891006,0,0,0,0,0,0.770243085573222,0.767518373630648,1.10269257987624,0.322260734604821,0,0.852266274161009,0,0,0,0.510450849978337,0.2023155617111,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0.974853958525138,0,0.272999822815972,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0,0,0,0.709522128141196,0,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,1.45802306691627,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0,0,0,0,0.307801034015188,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0.977756913674015,0,0.213452994739353,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,2.17199840701485,0,0.326587360109409,0,0,0.340776043570843,1.13312091520126,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0.597019211547496,0,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,1.09109195521536,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,1.30497145982606,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0.895260599125562,0,0,1.31051565830417,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0.504143392443436,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,0.535701835878287,1.3451348888753,0,0.682986574053893,0.0887023701626388,0,0,0.203909198930495,0.065772773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| ||
|short_description=p5@KRBOX1 | |short_description=p5@KRBOX1 | ||
}} | }} |
Latest revision as of 07:16, 18 September 2015
Short description: | p5@KRBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRBOX1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000418093, NM_001205272_5end |
EntrezGene: | KRBOX1 |
HGNC: | 38708 |
UniProt: | C9JBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.58e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.06e-10 | 1 |
cranial nerve | 4.06e-10 | 1 |
nerve trunk | 4.06e-10 | 1 |
nerve connecting eye with brain | 4.06e-10 | 1 |
nerve | 4.06e-10 | 1 |
retinal neural layer | 4.06e-10 | 1 |
presumptive neural retina | 4.06e-10 | 1 |
placenta | 6.63e-10 | 4 |
allantois | 6.63e-10 | 4 |