FFCP PHASE1:Hg19::chr4:102268904..102268948,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90024 | |EntrezGene=90024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V197,E9PRG9 | |UniProt=G3V197,E9PRG9 | ||
|association_with_transcript=0bp_to_ENST00000527564,ENST00000529296,NR_033874,uc003hvw.2_5end | |association_with_transcript=0bp_to_ENST00000527564,ENST00000529296,NR_033874,uc003hvw.2_5end | ||
|cluster_id=chr4:102268904..102268948,+ | |||
|coexpression_cluster_id=C1060 | |coexpression_cluster_id=C1060 | ||
|description=CAGE_peak_1_at_FLJ20021_5end | |description=CAGE_peak_1_at_FLJ20021_5end | ||
|id=chr4:102268904..102268948,+ | |id=chr4:102268904..102268948,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.75e-10!115;UBERON:0000483!6.02e-10!309;UBERON:0000119!1.77e-09!312;UBERON:0002616!2.68e-09!59;UBERON:0000475!4.96e-09!365;UBERON:0000153!2.28e-08!129;UBERON:0007811!2.28e-08!129;UBERON:0001049!2.36e-08!57;UBERON:0005068!2.36e-08!57;UBERON:0006241!2.36e-08!57;UBERON:0007135!2.36e-08!57;UBERON:0000033!2.57e-08!123;UBERON:0000955!4.75e-08!69;UBERON:0006238!4.75e-08!69;UBERON:0004111!6.32e-08!241;UBERON:0000477!6.33e-08!286;UBERON:0004121!9.92e-08!169;UBERON:0001869!1.26e-07!32;UBERON:0000481!1.58e-07!347;UBERON:0002619!1.60e-07!22;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0003080!2.62e-07!42;UBERON:0002020!2.64e-07!34;UBERON:0003528!2.64e-07!34;UBERON:0002780!4.34e-07!41;UBERON:0001890!4.34e-07!41;UBERON:0006240!4.34e-07!41;UBERON:0001893!5.57e-07!34;UBERON:0003056!7.59e-07!61;UBERON:0003075!7.82e-07!86;UBERON:0007284!7.82e-07!86;UBERON:0002791!9.26e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.75e-10!115;UBERON:0000483!6.02e-10!309;UBERON:0000119!1.77e-09!312;UBERON:0002616!2.68e-09!59;UBERON:0000475!4.96e-09!365;UBERON:0000153!2.28e-08!129;UBERON:0007811!2.28e-08!129;UBERON:0001049!2.36e-08!57;UBERON:0005068!2.36e-08!57;UBERON:0006241!2.36e-08!57;UBERON:0007135!2.36e-08!57;UBERON:0000033!2.57e-08!123;UBERON:0000955!4.75e-08!69;UBERON:0006238!4.75e-08!69;UBERON:0004111!6.32e-08!241;UBERON:0000477!6.33e-08!286;UBERON:0004121!9.92e-08!169;UBERON:0001869!1.26e-07!32;UBERON:0000481!1.58e-07!347;UBERON:0002619!1.60e-07!22;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0003080!2.62e-07!42;UBERON:0002020!2.64e-07!34;UBERON:0003528!2.64e-07!34;UBERON:0002780!4.34e-07!41;UBERON:0001890!4.34e-07!41;UBERON:0006240!4.34e-07!41;UBERON:0001893!5.57e-07!34;UBERON:0003056!7.59e-07!61;UBERON:0003075!7.82e-07!86;UBERON:0007284!7.82e-07!86;UBERON:0002791!9.26e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.09e-07;22!UBERON:0001869;9.07e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,5.15e-11,306;UBERON:0000119,1.63e-10,309;UBERON:0007023,2.92e-10,114;UBERON:0010371,5.58e-10,104;UBERON:0004121,1.37e-08,171;UBERON:0000924,1.37e-08,171;UBERON:0006601,1.37e-08,171;UBERON:0000073,1.87e-08,53;UBERON:0002616,1.87e-08,53;UBERON:0001049,3.88e-08,56;UBERON:0005068,3.88e-08,56;UBERON:0006241,3.88e-08,56;UBERON:0007135,3.88e-08,56;UBERON:0003075,4.10e-08,82;UBERON:0007284,4.10e-08,82;UBERON:0000955,7.16e-08,68;UBERON:0006238,7.16e-08,68;UBERON:0004111,9.65e-08,240;UBERON:0002346,1.19e-07,86;UBERON:0001869,1.26e-07,32;UBERON:0010314,1.58e-07,132;UBERON:0002619,1.59e-07,22;UBERON:0003528,2.63e-07,34;UBERON:0002020,2.63e-07,34;UBERON:0002780,4.33e-07,41;UBERON:0001890,4.33e-07,41;UBERON:0003080,4.33e-07,41;UBERON:0006240,4.33e-07,41;UBERON:0001893,5.55e-07,34;UBERON:0002791,5.77e-07,32;UBERON:0003056,9.69e-07,61 | |||
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| ||
|short_description=p1@FLJ20021 | |short_description=p1@FLJ20021 | ||
}} | }} |
Latest revision as of 03:21, 20 September 2015
Short description: | p1@FLJ20021 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLJ20021_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 0bp_to_ENST00000527564, ENST00000529296, NR_033874, uc003hvw.2_5end |
EntrezGene: | FLJ20021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium | 5.15e-11 | 306 |
cell layer | 1.63e-10 | 309 |
adult organism | 2.92e-10 | 114 |
ecto-epithelium | 5.58e-10 | 104 |
ectoderm-derived structure | 1.37e-08 | 171 |
ectoderm | 1.37e-08 | 171 |
presumptive ectoderm | 1.37e-08 | 171 |
regional part of nervous system | 1.87e-08 | 53 |
regional part of brain | 1.87e-08 | 53 |
neural tube | 3.88e-08 | 56 |
neural rod | 3.88e-08 | 56 |
future spinal cord | 3.88e-08 | 56 |
neural keel | 3.88e-08 | 56 |
neural plate | 4.10e-08 | 82 |
presumptive neural plate | 4.10e-08 | 82 |
brain | 7.16e-08 | 68 |
future brain | 7.16e-08 | 68 |
anatomical conduit | 9.65e-08 | 240 |
neurectoderm | 1.19e-07 | 86 |
cerebral hemisphere | 1.26e-07 | 32 |
structure with developmental contribution from neural crest | 1.58e-07 | 132 |
regional part of cerebral cortex | 1.59e-07 | 22 |
brain grey matter | 2.63e-07 | 34 |
gray matter | 2.63e-07 | 34 |
regional part of forebrain | 4.33e-07 | 41 |
forebrain | 4.33e-07 | 41 |
anterior neural tube | 4.33e-07 | 41 |
future forebrain | 4.33e-07 | 41 |
telencephalon | 5.55e-07 | 34 |
regional part of telencephalon | 5.77e-07 | 32 |
pre-chordal neural plate | 9.69e-07 | 61 |