FFCP PHASE1:Hg19::chr4:165798380..165798390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000510062_5end | |association_with_transcript=-3bp_to_ENST00000510062_5end | ||
|cluster_id=chr4:165798380..165798390,+ | |||
|coexpression_cluster_id=C4390 | |coexpression_cluster_id=C4390 | ||
|description=CAGE_peak_1_at_ENST00000510062_5end | |description=CAGE_peak_1_at_ENST00000510062_5end | ||
|id=chr4:165798380..165798390,+ | |id=chr4:165798380..165798390,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.10e-25!5;CL:0000039!1.11e-10!7;CL:0000586!1.11e-10!7;CL:0000540!4.54e-08!6;CL:0000031!4.54e-08!6;CL:0000404!4.54e-08!6 | |ontology_enrichment_celltype=CL:0002322!3.10e-25!5;CL:0000039!1.11e-10!7;CL:0000586!1.11e-10!7;CL:0000540!4.54e-08!6;CL:0000031!4.54e-08!6;CL:0000404!4.54e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.30e-52;5!CL:0002563;8.03e-18;4!CL:0002321;8.60e-18;15!CL:0000313;1.44e-17;1!CL:0002253;7.98e-10;2!CL:0000159;1.86e-09;2!CL:0000148;1.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.31e-52,5;CL:0002563,8.04e-18,4;CL:0000313,1.70e-17,1;CL:0002253,7.98e-10,2;CL:0000159,2.02e-09,2;CL:0000148,1.52e-07,10;CL:0000541,1.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.37e-18;1 | |||
|ontology_enrichment_disease=DOID:3095!2.46e-12!22;DOID:2994!2.46e-12!22 | |ontology_enrichment_disease=DOID:3095!2.46e-12!22;DOID:2994!2.46e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:178;7.37e-18;1!DOID:326;7.37e-18;1!DOID:3978;7.37e-18;1!DOID:3394;7.37e-18;1!DOID:5844;7.37e-18;1!DOID:2152;1.44e-17;1!DOID:114;1.33e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,5.26e-18,1;DOID:326,5.26e-18,1;DOID:3978,5.26e-18,1;DOID:3394,5.26e-18,1;DOID:5844,5.26e-18,1;DOID:2152,1.70e-17,1;DOID:114,1.12e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.03e-18;4!UBERON:0001262;8.03e-18;4!UBERON:0004786;8.03e-18;4!UBERON:0004808;8.03e-18;4!UBERON:0001277;8.03e-18;4!UBERON:0004911;1.44e-17;1!UBERON:0000485;1.33e-10;7!UBERON:0003929;1.33e-10;7!UBERON:0004909;1.86e-09;2!UBERON:0003350;2.16e-09;8!UBERON:0005409;3.41e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,8.04e-18,4;UBERON:0001262,8.04e-18,4;UBERON:0004786,8.04e-18,4;UBERON:0004808,8.04e-18,4;UBERON:0001277,8.04e-18,4;UBERON:0004911,1.70e-17,1;UBERON:0004909,2.02e-09,2;UBERON:0003350,2.16e-09,8;UBERON:0000485,1.90e-08,9 | |||
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|short_description=p1@ENST00000510062 | |short_description=p1@ENST00000510062 | ||
}} | }} |
Latest revision as of 03:00, 30 July 2015
Short description: | p1@ENST00000510062 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000510062_5end |
Coexpression cluster: | C4390_gastric_colon_hepatoblastoma_H9_iPS_Intestinal_heart |
Association with transcript: | -3bp_to_ENST00000510062_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.31e-52 | 5 |
intestinal epithelial cell | 8.04e-18 | 4 |
serous secreting cell | 1.70e-17 | 1 |
epithelial cell of large intestine | 7.98e-10 | 2 |
seromucus secreting cell | 2.02e-09 | 2 |
melanocyte | 1.52e-07 | 10 |
melanoblast | 1.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 8.04e-18 | 4 |
wall of intestine | 8.04e-18 | 4 |
gastrointestinal system mucosa | 8.04e-18 | 4 |
gastrointestinal system epithelium | 8.04e-18 | 4 |
intestinal epithelium | 8.04e-18 | 4 |
epithelium of female gonad | 1.70e-17 | 1 |
epithelium of gonad | 2.02e-09 | 2 |
epithelium of mucosa | 2.16e-09 | 8 |
simple columnar epithelium | 1.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 5.26e-18 | 1 |
ischemia | 5.26e-18 | 1 |
extrinsic cardiomyopathy | 5.26e-18 | 1 |
myocardial ischemia | 5.26e-18 | 1 |
myocardial infarction | 5.26e-18 | 1 |
ovary epithelial cancer | 1.70e-17 | 1 |
heart disease | 1.12e-09 | 2 |