FFCP PHASE1:Hg19::chr19:35760750..35760764,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:35760750..35760764,+
|short_description=p16@USF2
|description=CAGE_peak_16_at_USF2_5end
|association_with_transcript=-12bp_to_M77476_5end
|EntrezGene=739...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7392 | |EntrezGene=7392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12594 | |HGNC=12594 | ||
|TSSclassifier=strong | |||
|UniProt=Q15853 | |UniProt=Q15853 | ||
|association_with_transcript=-12bp_to_M77476_5end | |||
|cluster_id=chr19:35760750..35760764,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_USF2_5end | |||
|id=chr19:35760750..35760764,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.89e-11!70;CL:0000557!2.61e-10!71;CL:0002194!3.85e-10!63;CL:0000576!3.85e-10!63;CL:0000040!3.85e-10!63;CL:0000559!3.85e-10!63;CL:0000766!6.52e-10!76;CL:0002009!1.49e-09!65;CL:0002031!8.10e-08!124;CL:0002087!6.60e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.21e-15;1!CL:0002625;2.21e-15;1!CL:0000216;2.21e-15;1!CL:0000182;2.24e-11;12!CL:0000235;1.36e-10;6!CL:0000473;5.36e-07;39!CL:0000234;5.36e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.34e-15,1;CL:0002625,1.34e-15,1;CL:0000216,1.34e-15,1;CL:0000182,2.20e-11,12;CL:0000235,1.43e-10,6;CL:0000473,2.33e-07,48;CL:0000234,2.33e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.71e-09!80;UBERON:0002405!7.07e-08!115;UBERON:0001474!1.77e-07!86;UBERON:0004765!3.03e-07!101;UBERON:0001434!3.03e-07!101;UBERON:0002390!9.14e-07!102;UBERON:0003061!9.14e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.21e-15;1!UBERON:0001343;2.21e-15;1!UBERON:0004910;2.21e-15;1!UBERON:0004813;2.21e-15;1!UBERON:0002107;2.02e-12;19!UBERON:0006925;2.02e-12;19!UBERON:0002423;1.68e-09;25!UBERON:0004909;2.40e-08;2!UBERON:0002365;5.91e-08;31!UBERON:0002330;5.91e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.34e-15,1;UBERON:0001343,1.34e-15,1;UBERON:0004910,1.34e-15,1;UBERON:0005154,1.34e-15,1;UBERON:0005295,1.34e-15,1;UBERON:0004813,1.34e-15,1;UBERON:0005297,1.34e-15,1;UBERON:0005294,1.34e-15,1;UBERON:0010141,1.34e-15,1;UBERON:0005891,1.34e-15,1;UBERON:0002107,1.99e-12,19;UBERON:0006925,1.99e-12,19;UBERON:0008836,1.99e-12,19;UBERON:0008835,9.06e-11,22;UBERON:0003894,9.06e-11,22;UBERON:0009854,2.60e-10,23;UBERON:0007499,1.66e-09,25;UBERON:0009497,1.66e-09,25;UBERON:0000015,1.66e-09,25;UBERON:0002423,1.66e-09,25;UBERON:0006235,1.66e-09,25;UBERON:0004161,1.66e-09,25;UBERON:0009856,3.77e-09,26;UBERON:0004909,1.86e-08,2;UBERON:0002365,1.04e-07,31;UBERON:0002330,1.04e-07,31;UBERON:0002368,7.53e-07,35 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.971680998056939,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0,1.09162460023138,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.348259474598534,0.26591592103773,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,6.33775174109154,2.94848165003288,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.9273691048295,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.293977192243133,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.343189995723929,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,5.42243264608905,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0.250381861413,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0.28984205722165,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.315543124386369,0.203974470572744,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.251085279189606,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0.971680998056939,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0.645484683583826,1.35426486594342,0,1.09162460023138,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0.348259474598534,0.26591592103773,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,6.33775174109154,2.94848165003288,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.9273691048295,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.293977192243133,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.343189995723929,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,5.42243264608905,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0.250381861413,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0.28984205722165,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.315543124386369,0.203974470572744,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p16@USF2 | |||
}} | }} |
Latest revision as of 11:15, 17 September 2015
Short description: | p16@USF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_USF2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -12bp_to_M77476_5end |
EntrezGene: | USF2 |
HGNC: | 12594 |
UniProt: | Q15853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.34e-15 | 1 |
seminiferous tubule epithelial cell | 1.34e-15 | 1 |
Sertoli cell | 1.34e-15 | 1 |
hepatocyte | 2.20e-11 | 12 |
macrophage | 1.43e-10 | 6 |
defensive cell | 2.33e-07 | 48 |
phagocyte | 2.33e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.34e-15 | 1 |
seminiferous tubule of testis | 1.34e-15 | 1 |
epithelium of male gonad | 1.34e-15 | 1 |
epithelial cord | 1.34e-15 | 1 |
sex cord | 1.34e-15 | 1 |
seminiferous tubule epithelium | 1.34e-15 | 1 |
testis sex cord | 1.34e-15 | 1 |
genital ridge | 1.34e-15 | 1 |
primitive sex cord of indifferent gonad | 1.34e-15 | 1 |
coelomic epithelium | 1.34e-15 | 1 |
liver | 1.99e-12 | 19 |
digestive gland | 1.99e-12 | 19 |
liver bud | 1.99e-12 | 19 |
hepatic diverticulum | 9.06e-11 | 22 |
liver primordium | 9.06e-11 | 22 |
digestive tract diverticulum | 2.60e-10 | 23 |
epithelial sac | 1.66e-09 | 25 |
epithelium of foregut-midgut junction | 1.66e-09 | 25 |
anatomical boundary | 1.66e-09 | 25 |
hepatobiliary system | 1.66e-09 | 25 |
foregut-midgut junction | 1.66e-09 | 25 |
septum transversum | 1.66e-09 | 25 |
sac | 3.77e-09 | 26 |
epithelium of gonad | 1.86e-08 | 2 |
exocrine gland | 1.04e-07 | 31 |
exocrine system | 1.04e-07 | 31 |
endocrine gland | 7.53e-07 | 35 |