FFCP PHASE1:Hg19::chr4:186578448..186578462,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000494140_5end | |association_with_transcript=0bp_to_ENST00000494140_5end | ||
|cluster_id=chr4:186578448..186578462,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_21_at_SORBS2_5end | |description=CAGE_peak_21_at_SORBS2_5end | ||
|id=chr4:186578448..186578462,- | |id=chr4:186578448..186578462,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.80e-10;1!UBERON:0009143;2.48e-10;1!UBERON:0004874;2.48e-10;1!UBERON:0001045;3.55e-10;1!UBERON:0006242;4.44e-10;1!UBERON:0008801;7.88e-10;1!UBERON:0010227;7.88e-10;1!UBERON:0010226;7.88e-10;1!UBERON:0005754;7.88e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.22e-86!115;UBERON:0001049!8.27e-28!57;UBERON:0005068!8.27e-28!57;UBERON:0006241!8.27e-28!57;UBERON:0007135!8.27e-28!57;UBERON:0003075!3.03e-25!86;UBERON:0007284!3.03e-25!86;UBERON:0002616!1.23e-24!59;UBERON:0005743!1.63e-24!86;UBERON:0002346!1.28e-23!90;UBERON:0001017!5.96e-23!82;UBERON:0000955!3.90e-22!69;UBERON:0006238!3.90e-22!69;UBERON:0003080!4.36e-22!42;UBERON:0000073!3.66e-21!94;UBERON:0001016!3.66e-21!94;UBERON:0002780!1.10e-20!41;UBERON:0001890!1.10e-20!41;UBERON:0006240!1.10e-20!41;UBERON:0000153!6.92e-19!129;UBERON:0007811!6.92e-19!129;UBERON:0000033!5.61e-18!123;UBERON:0003056!2.87e-17!61;UBERON:0004121!9.51e-16!169;UBERON:0002020!2.05e-15!34;UBERON:0003528!2.05e-15!34;UBERON:0001893!2.60e-15!34;UBERON:0000924!4.41e-15!173;UBERON:0006601!4.41e-15!173;UBERON:0002791!2.89e-14!33;UBERON:0001869!3.17e-13!32;UBERON:0002298!5.00e-11!8;UBERON:0004111!4.09e-10!241;UBERON:0002308!4.15e-09!9;UBERON:0000125!4.15e-09!9;UBERON:0000956!8.59e-09!25;UBERON:0000203!8.59e-09!25;UBERON:0002619!8.99e-09!22;UBERON:0001950!4.20e-08!20;UBERON:0000025!1.28e-07!194;UBERON:0000477!1.77e-07!286;UBERON:0001894!2.89e-07!7;UBERON:0006222!2.89e-07!7;UBERON:0000481!3.24e-07!347;UBERON:0000062!4.52e-07!511;UBERON:0002420!5.33e-07!9;UBERON:0007245!5.33e-07!9;UBERON:0010009!5.33e-07!9;UBERON:0010011!5.33e-07!9;UBERON:0000454!5.33e-07!9;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15;UBERON:0004733!6.83e-07!12;UBERON:0002028!6.83e-07!12;UBERON:0007277!6.83e-07!12;UBERON:0006947!6.89e-07!3;UBERON:0004054!6.89e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!9.22e-86!115;UBERON:0001049!8.27e-28!57;UBERON:0005068!8.27e-28!57;UBERON:0006241!8.27e-28!57;UBERON:0007135!8.27e-28!57;UBERON:0003075!3.03e-25!86;UBERON:0007284!3.03e-25!86;UBERON:0002616!1.23e-24!59;UBERON:0005743!1.63e-24!86;UBERON:0002346!1.28e-23!90;UBERON:0001017!5.96e-23!82;UBERON:0000955!3.90e-22!69;UBERON:0006238!3.90e-22!69;UBERON:0003080!4.36e-22!42;UBERON:0000073!3.66e-21!94;UBERON:0001016!3.66e-21!94;UBERON:0002780!1.10e-20!41;UBERON:0001890!1.10e-20!41;UBERON:0006240!1.10e-20!41;UBERON:0000153!6.92e-19!129;UBERON:0007811!6.92e-19!129;UBERON:0000033!5.61e-18!123;UBERON:0003056!2.87e-17!61;UBERON:0004121!9.51e-16!169;UBERON:0002020!2.05e-15!34;UBERON:0003528!2.05e-15!34;UBERON:0001893!2.60e-15!34;UBERON:0000924!4.41e-15!173;UBERON:0006601!4.41e-15!173;UBERON:0002791!2.89e-14!33;UBERON:0001869!3.17e-13!32;UBERON:0002298!5.00e-11!8;UBERON:0004111!4.09e-10!241;UBERON:0002308!4.15e-09!9;UBERON:0000125!4.15e-09!9;UBERON:0000956!8.59e-09!25;UBERON:0000203!8.59e-09!25;UBERON:0002619!8.99e-09!22;UBERON:0001950!4.20e-08!20;UBERON:0000025!1.28e-07!194;UBERON:0000477!1.77e-07!286;UBERON:0001894!2.89e-07!7;UBERON:0006222!2.89e-07!7;UBERON:0000481!3.24e-07!347;UBERON:0000062!4.52e-07!511;UBERON:0002420!5.33e-07!9;UBERON:0007245!5.33e-07!9;UBERON:0010009!5.33e-07!9;UBERON:0010011!5.33e-07!9;UBERON:0000454!5.33e-07!9;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15;UBERON:0004733!6.83e-07!12;UBERON:0002028!6.83e-07!12;UBERON:0007277!6.83e-07!12;UBERON:0006947!6.89e-07!3;UBERON:0004054!6.89e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.78e-18;2!UBERON:0002757;1.78e-18;2!UBERON:0010134;1.78e-18;2!UBERON:0005408;1.78e-18;2!UBERON:0001899;1.78e-18;2!UBERON:0004151;2.83e-12;3!UBERON:0000989;2.48e-10;1!UBERON:0008811;2.48e-10;1!UBERON:0001154;3.55e-10;1!UBERON:0001153;3.55e-10;1!UBERON:0009854;3.55e-10;1!UBERON:0002084;7.88e-10;1!UBERON:0002079;7.88e-10;1!UBERON:0001831;7.88e-10;1!UBERON:0000998;7.88e-10;1!UBERON:0000996;7.88e-10;1!UBERON:0006868;7.88e-10;1!UBERON:0002082;7.88e-10;1!UBERON:0001567;7.88e-10;1!UBERON:0003296;1.05e-09;4!UBERON:0010133;1.05e-09;4!UBERON:0002784;1.05e-09;4!UBERON:0007023;4.05e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-24,114;UBERON:0001905,2.43e-18,2;UBERON:0002757,2.43e-18,2;UBERON:0010134,2.43e-18,2;UBERON:0005408,2.43e-18,2;UBERON:0001899,2.43e-18,2;UBERON:0004151,2.38e-12,3;UBERON:0000989,2.37e-10,1;UBERON:0008811,2.37e-10,1;UBERON:0006258,2.37e-10,1;UBERON:0005876,2.37e-10,1;UBERON:0004874,2.37e-10,1;UBERON:0001154,3.71e-10,1;UBERON:0001153,3.71e-10,1;UBERON:0001045,3.71e-10,1;UBERON:0002079,6.33e-10,1;UBERON:0000996,6.91e-10,1;UBERON:0002084,7.55e-10,1;UBERON:0002082,7.55e-10,1;UBERON:0010226,7.55e-10,1;UBERON:0000998,8.24e-10,1;UBERON:0006868,8.24e-10,1;UBERON:0001831,9.82e-10,1;UBERON:0001567,9.82e-10,1;UBERON:0008801,9.82e-10,1;UBERON:0003296,1.22e-09,4;UBERON:0010133,1.22e-09,4;UBERON:0002784,1.22e-09,4;UBERON:0003064,1.21e-07,28;UBERON:0001046,1.50e-07,19 | |||
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|short_description=p21@SORBS2 | |short_description=p21@SORBS2 | ||
}} | }} |
Latest revision as of 03:42, 17 September 2015
Short description: | p21@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SORBS2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000494140_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.60e-24 | 114 |
pineal body | 2.43e-18 | 2 |
regional part of epithalamus | 2.43e-18 | 2 |
secretory circumventricular organ | 2.43e-18 | 2 |
circumventricular organ | 2.43e-18 | 2 |
epithalamus | 2.43e-18 | 2 |
cardiac chamber | 2.38e-12 | 3 |
penis | 2.37e-10 | 1 |
intromittent organ | 2.37e-10 | 1 |
lateral plate mesenchyme | 2.37e-10 | 1 |
undifferentiated genital tubercle | 2.37e-10 | 1 |
somatopleure | 2.37e-10 | 1 |
vermiform appendix | 3.71e-10 | 1 |
caecum | 3.71e-10 | 1 |
midgut | 3.71e-10 | 1 |
left cardiac atrium | 6.33e-10 | 1 |
vagina | 6.91e-10 | 1 |
heart left ventricle | 7.55e-10 | 1 |
cardiac ventricle | 7.55e-10 | 1 |
future cardiac ventricle | 7.55e-10 | 1 |
seminal vesicle | 8.24e-10 | 1 |
seminal fluid secreting gland | 8.24e-10 | 1 |
parotid gland | 9.82e-10 | 1 |
cheek | 9.82e-10 | 1 |
parotid gland primordium | 9.82e-10 | 1 |
gland of diencephalon | 1.22e-09 | 4 |
neuroendocrine gland | 1.22e-09 | 4 |
regional part of diencephalon | 1.22e-09 | 4 |
intermediate mesoderm | 1.21e-07 | 28 |
hindgut | 1.50e-07 | 19 |