FFCP PHASE1:Hg19::chr4:48018580..48018602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1259 | |EntrezGene=1259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2148 | |HGNC=2148 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000514170_5end | |association_with_transcript=6bp_to_ENST00000514170_5end | ||
|cluster_id=chr4:48018580..48018602,- | |||
|coexpression_cluster_id=C4420 | |coexpression_cluster_id=C4420 | ||
|description=CAGE_peak_5_at_CNGA1_5end | |description=CAGE_peak_5_at_CNGA1_5end | ||
|id=chr4:48018580..48018602,- | |id=chr4:48018580..48018602,- | ||
|ontology_enrichment_celltype=CL:0000223!3.10e-13!59;CL:0002076!9.04e-12!43;CL:0002251!9.29e-10!21;CL:0000066!2.01e-08!254 | |ontology_enrichment_celltype=CL:0000223!3.10e-13!59;CL:0002076!9.04e-12!43;CL:0002251!9.29e-10!21;CL:0000066!2.01e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.06e-09;1!UBERON:0000358;5.07e-09;1!UBERON:0009143;1.22e-08;1!UBERON:0008801;1.22e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!2.32e-12!14;DOID:305!5.42e-10!106 | |ontology_enrichment_disease=DOID:1749!2.32e-12!14;DOID:305!5.42e-10!106 | ||
|ontology_enrichment_disease_v019=DOID:178;1.22e-08;1!DOID:326;1.22e-08;1!DOID:3978;1.22e-08;1!DOID:3394;1.22e-08;1!DOID:5844;1.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.13e-08,1;DOID:326,1.13e-08,1;DOID:3978,1.13e-08,1;DOID:3394,1.13e-08,1;DOID:5844,1.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.91e-18!155;UBERON:0001555!6.91e-18!155;UBERON:0007026!6.91e-18!155;UBERON:0004119!8.25e-18!169;UBERON:0000925!8.25e-18!169;UBERON:0006595!8.25e-18!169;UBERON:0004921!2.67e-16!129;UBERON:0004185!2.67e-16!129;UBERON:0000161!1.81e-12!35;UBERON:0000077!2.02e-12!130;UBERON:0000344!1.00e-11!12;UBERON:0000160!6.20e-09!27;UBERON:0003729!1.69e-08!5;UBERON:0000166!1.87e-08!21;UBERON:0001041!2.64e-08!98;UBERON:0005409!5.25e-08!35;UBERON:0005911!1.09e-07!82;UBERON:0000062!2.49e-07!511;UBERON:0001046!2.55e-07!19;UBERON:0003343!3.67e-07!4;UBERON:0004785!3.67e-07!4;UBERON:0000974!5.10e-07!10;UBERON:0003929!8.48e-07!54;UBERON:0000165!9.31e-07!28;UBERON:0000930!9.31e-07!28 | |ontology_enrichment_uberon=UBERON:0001007!6.91e-18!155;UBERON:0001555!6.91e-18!155;UBERON:0007026!6.91e-18!155;UBERON:0004119!8.25e-18!169;UBERON:0000925!8.25e-18!169;UBERON:0006595!8.25e-18!169;UBERON:0004921!2.67e-16!129;UBERON:0004185!2.67e-16!129;UBERON:0000161!1.81e-12!35;UBERON:0000077!2.02e-12!130;UBERON:0000344!1.00e-11!12;UBERON:0000160!6.20e-09!27;UBERON:0003729!1.69e-08!5;UBERON:0000166!1.87e-08!21;UBERON:0001041!2.64e-08!98;UBERON:0005409!5.25e-08!35;UBERON:0005911!1.09e-07!82;UBERON:0000062!2.49e-07!511;UBERON:0001046!2.55e-07!19;UBERON:0003343!3.67e-07!4;UBERON:0004785!3.67e-07!4;UBERON:0000974!5.10e-07!10;UBERON:0003929!8.48e-07!54;UBERON:0000165!9.31e-07!28;UBERON:0000930!9.31e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.07e-09;1!UBERON:0001831;1.22e-08;1!UBERON:0001301;1.22e-08;1!UBERON:0000997;1.22e-08;1!UBERON:0005056;1.22e-08;1!UBERON:0004176;1.22e-08;1!UBERON:0001567;1.22e-08;1!UBERON:0002108;6.74e-07;4!UBERON:0004921;7.41e-07;33!UBERON:0000160;7.53e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,4.19e-09,1;UBERON:0000997,7.18e-09,1;UBERON:0005056,7.18e-09,1;UBERON:0001301,1.05e-08,1;UBERON:0001831,2.06e-08,1;UBERON:0001567,2.06e-08,1;UBERON:0008801,2.06e-08,1;UBERON:0000160,6.91e-07,17;UBERON:0002108,7.05e-07,4;UBERON:0004921,7.15e-07,118 | |||
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| ||
|short_description=p5@CNGA1 | |short_description=p5@CNGA1 | ||
}} | }} |
Latest revision as of 22:19, 17 September 2015
Short description: | p5@CNGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNGA1_5end |
Coexpression cluster: | C4420_colon_Hepatocyte_placenta_mesothelioma_liver_lung_amniotic |
Association with transcript: | 6bp_to_ENST00000514170_5end |
EntrezGene: | CNGA1 |
HGNC: | 2148 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 4.19e-09 | 1 |
mammalian vulva | 7.18e-09 | 1 |
external female genitalia | 7.18e-09 | 1 |
epididymis | 1.05e-08 | 1 |
parotid gland | 2.06e-08 | 1 |
cheek | 2.06e-08 | 1 |
parotid gland primordium | 2.06e-08 | 1 |
intestine | 6.91e-07 | 17 |
small intestine | 7.05e-07 | 4 |
subdivision of digestive tract | 7.15e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.13e-08 | 1 |
ischemia | 1.13e-08 | 1 |
extrinsic cardiomyopathy | 1.13e-08 | 1 |
myocardial ischemia | 1.13e-08 | 1 |
myocardial infarction | 1.13e-08 | 1 |