FFCP PHASE1:Hg19::chr19:36592959..36592975,+: Difference between revisions
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|id=chr19:36592959..36592975,+
|short_description=p@chr19:36592959..36592975,+
|description=CAGE_peak_at_chr19:36592959..36592975,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:36592959..36592975,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr19:36592959..36592975,+ | |||
|id=chr19:36592959..36592975,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.68e-15!3;CL:0002577!1.68e-15!3;CL:0002536!8.28e-11!2;CL:0000575!1.84e-10!2;CL:0002537!2.97e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.20e-66;19!CL:0002577;1.33e-60;3!CL:0002536;1.34e-40;2!CL:0002537;8.82e-17;5!CL:0002541;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.20e-66,19;CL:0002577,1.33e-60,3;CL:0002536,1.34e-40,2;CL:0002537,8.82e-17,5;CL:0002541,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.30e-11;2!UBERON:0010056;4.30e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.05e-32!14;UBERON:0000158!1.05e-32!14;UBERON:0001987!1.09e-19!4;UBERON:0004340!1.09e-19!4;UBERON:0000478!3.14e-18!24;UBERON:0000305!3.40e-17!7;UBERON:0003124!3.63e-17!7;UBERON:0004871!5.22e-15!8;UBERON:0000995!5.28e-10!21;UBERON:0005795!1.67e-09!22;UBERON:0003975!1.67e-09!22;UBERON:0004175!3.03e-08!25;UBERON:0004923!6.61e-08!57;UBERON:0001723!2.48e-07!3;UBERON:0001033!2.48e-07!3;UBERON:0010056!2.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.99e-52;24!UBERON:0005631;2.80e-49;10!UBERON:0000158;2.80e-49;10!UBERON:0001987;1.07e-45;4!UBERON:0000305;1.99e-45;7!UBERON:0001723;6.92e-27;3!UBERON:0001033;6.92e-27;3!UBERON:0003124;7.26e-08;3!UBERON:0000920;7.26e-08;3!UBERON:0000077;2.38e-07;27!UBERON:0004923;8.94e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.56e-90,14;UBERON:0000158,7.56e-90,14;UBERON:0000478,1.99e-52,24;UBERON:0003124,7.92e-46,7;UBERON:0001987,1.07e-45,4;UBERON:0004340,1.07e-45,4;UBERON:0000305,1.99e-45,7;UBERON:0004871,7.86e-40,8;UBERON:0001723,6.92e-27,3;UBERON:0001033,6.92e-27,3;UBERON:0010056,6.92e-27,3;UBERON:0004923,5.76e-19,66;UBERON:0000995,2.75e-09,21;UBERON:0005795,6.84e-09,22;UBERON:0003975,6.84e-09,22;UBERON:0001042,8.96e-09,10;UBERON:0009145,8.96e-09,10;UBERON:0006562,4.66e-08,11;UBERON:0004175,6.81e-08,25;UBERON:0000920,7.26e-08,3;UBERON:0000077,7.03e-07,29 | |||
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| ||
|short_description=p@chr19:36592959..36592975,+ | |||
}} | }} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36592959..36592975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36592959..36592975, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.20e-66 | 19 |
placental epithelial cell | 1.33e-60 | 3 |
amniotic epithelial cell | 1.34e-40 | 2 |
amnion mesenchymal stem cell | 8.82e-17 | 5 |
chorionic membrane mesenchymal stem cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.56e-90 | 14 |
membranous layer | 7.56e-90 | 14 |
extraembryonic structure | 1.99e-52 | 24 |
chorion | 7.92e-46 | 7 |
placenta | 1.07e-45 | 4 |
allantois | 1.07e-45 | 4 |
amnion | 1.99e-45 | 7 |
somatic layer of lateral plate mesoderm | 7.86e-40 | 8 |
tongue | 6.92e-27 | 3 |
gustatory system | 6.92e-27 | 3 |
future tongue | 6.92e-27 | 3 |
organ component layer | 5.76e-19 | 66 |
uterus | 2.75e-09 | 21 |
embryonic uterus | 6.84e-09 | 22 |
internal female genitalia | 6.84e-09 | 22 |
chordate pharynx | 8.96e-09 | 10 |
pharyngeal region of foregut | 8.96e-09 | 10 |
pharynx | 4.66e-08 | 11 |
internal genitalia | 6.81e-08 | 25 |
egg chorion | 7.26e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 7.03e-07 | 29 |