FFCP PHASE1:Hg19::chr6:130686856..130686885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |EntrezGene=114801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |HGNC=21075 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |UniProt=Q86VY9 | ||
|association_with_transcript=0bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |association_with_transcript=0bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | ||
|cluster_id=chr6:130686856..130686885,+ | |||
|coexpression_cluster_id=C714 | |coexpression_cluster_id=C714 | ||
|description=CAGE_peak_11_at_TMEM200A_5end | |description=CAGE_peak_11_at_TMEM200A_5end | ||
|id=chr6:130686856..130686885,+ | |id=chr6:130686856..130686885,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.44e-27!180;CL:0000192!8.47e-19!42;CL:0000514!8.47e-19!42;CL:0000359!3.94e-17!32;CL:0000187!1.72e-15!54;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000057!1.09e-13!75;CL:0000393!4.14e-13!60;CL:0000211!4.14e-13!60;CL:0000183!6.65e-13!59;CL:0002334!3.67e-10!12;CL:0002620!3.33e-07!23;CL:0002539!3.55e-07!10 | |ontology_enrichment_celltype=CL:0000055!3.44e-27!180;CL:0000192!8.47e-19!42;CL:0000514!8.47e-19!42;CL:0000359!3.94e-17!32;CL:0000187!1.72e-15!54;CL:0000680!1.07e-14!57;CL:0000056!1.07e-14!57;CL:0000355!1.07e-14!57;CL:0000057!1.09e-13!75;CL:0000393!4.14e-13!60;CL:0000211!4.14e-13!60;CL:0000183!6.65e-13!59;CL:0002334!3.67e-10!12;CL:0002620!3.33e-07!23;CL:0002539!3.55e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.67e-25;32!CL:0002595;3.32e-14;5!CL:0000192;1.14e-13;43!CL:0002334;6.54e-13;12!CL:0002539;9.50e-13;10!CL:0002594;3.33e-11;4!CL:1000306;7.85e-11;4!CL:0002547;7.85e-11;4!CL:0002579;3.69e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.81e-26,32;CL:0000192,8.09e-18,43;CL:0000514,8.09e-18,43;CL:0002595,4.65e-14,5;CL:0002334,7.14e-13,12;CL:0002539,7.35e-13,10;CL:0000187,8.22e-13,55;CL:0000680,6.84e-12,58;CL:0000056,6.84e-12,58;CL:0000355,6.84e-12,58;CL:0000393,4.59e-11,61;CL:0000211,4.59e-11,61;CL:1000306,5.18e-11,4;CL:0002547,5.18e-11,4;CL:0002594,5.46e-11,4;CL:0002579,3.39e-09,3;CL:0000723,1.16e-08,433;CL:0000048,1.89e-08,427;CL:0000034,3.04e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-13;43 | |||
|ontology_enrichment_disease=DOID:2394!1.49e-08!14 | |ontology_enrichment_disease=DOID:2394!1.49e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.79e-16;14!DOID:120;1.56e-07;27!DOID:193;7.03e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.96e-17,14;DOID:120,9.31e-08,27;DOID:193,4.39e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002385!3.35e-13!63;UBERON:0001015!3.35e-13!63;UBERON:0000383!3.35e-13!63;UBERON:0000914!7.50e-13!83;UBERON:0002329!7.50e-13!83;UBERON:0003077!7.50e-13!83;UBERON:0003059!7.50e-13!83;UBERON:0007282!7.50e-13!83;UBERON:0009618!7.50e-13!83;UBERON:0007285!7.50e-13!83;UBERON:0001134!9.67e-13!61;UBERON:0002036!9.67e-13!61;UBERON:0003082!9.67e-13!61;UBERON:0000486!2.81e-12!82;UBERON:0004290!3.05e-12!70;UBERON:0001637!3.73e-11!42;UBERON:0003509!3.73e-11!42;UBERON:0004572!3.73e-11!42;UBERON:0004573!5.86e-10!33;UBERON:0004571!5.86e-10!33;UBERON:0001135!2.59e-08!15;UBERON:0005256!1.63e-07!143;UBERON:0001981!2.10e-07!60;UBERON:0007500!2.10e-07!60;UBERON:0004537!2.10e-07!60;UBERON:0006965!2.10e-07!60;UBERON:0000475!2.30e-07!365;UBERON:0004237!3.55e-07!10;UBERON:0004695!3.55e-07!10;UBERON:0002111!3.55e-07!10;UBERON:0004178!3.55e-07!10 | |ontology_enrichment_uberon=UBERON:0002385!3.35e-13!63;UBERON:0001015!3.35e-13!63;UBERON:0000383!3.35e-13!63;UBERON:0000914!7.50e-13!83;UBERON:0002329!7.50e-13!83;UBERON:0003077!7.50e-13!83;UBERON:0003059!7.50e-13!83;UBERON:0007282!7.50e-13!83;UBERON:0009618!7.50e-13!83;UBERON:0007285!7.50e-13!83;UBERON:0001134!9.67e-13!61;UBERON:0002036!9.67e-13!61;UBERON:0003082!9.67e-13!61;UBERON:0000486!2.81e-12!82;UBERON:0004290!3.05e-12!70;UBERON:0001637!3.73e-11!42;UBERON:0003509!3.73e-11!42;UBERON:0004572!3.73e-11!42;UBERON:0004573!5.86e-10!33;UBERON:0004571!5.86e-10!33;UBERON:0001135!2.59e-08!15;UBERON:0005256!1.63e-07!143;UBERON:0001981!2.10e-07!60;UBERON:0007500!2.10e-07!60;UBERON:0004537!2.10e-07!60;UBERON:0006965!2.10e-07!60;UBERON:0000475!2.30e-07!365;UBERON:0004237!3.55e-07!10;UBERON:0004695!3.55e-07!10;UBERON:0002111!3.55e-07!10;UBERON:0004178!3.55e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.40e-18;33!UBERON:0004571;4.40e-18;33!UBERON:0001637;5.67e-16;42!UBERON:0003509;5.67e-16;42!UBERON:0004572;5.67e-16;42!UBERON:0003834;3.32e-14;5!UBERON:0001533;3.32e-14;5!UBERON:0003513;8.42e-14;7!UBERON:0000947;2.50e-13;21!UBERON:0010191;2.50e-13;21!UBERON:0004237;9.50e-13;10!UBERON:0004695;9.50e-13;10!UBERON:0002111;9.50e-13;10!UBERON:0004178;9.50e-13;10!UBERON:0001310;3.33e-11;4!UBERON:0003688;5.64e-11;6!UBERON:0002358;5.64e-11;6!UBERON:0003684;5.64e-11;6!UBERON:0001178;5.64e-11;6!UBERON:0007500;5.98e-11;56!UBERON:0001981;5.98e-11;56!UBERON:0004537;5.98e-11;56!UBERON:0004797;7.85e-11;4!UBERON:0000415;7.85e-11;4!UBERON:0007240;7.85e-11;4!UBERON:0005742;7.85e-11;4!UBERON:0005734;7.85e-11;4!UBERON:0004664;7.85e-11;4!UBERON:0004663;7.85e-11;4!UBERON:0000992;1.50e-08;13!UBERON:0002118;3.19e-08;5!UBERON:0001135;4.23e-08;15!UBERON:0000055;2.88e-07;65!UBERON:0004457;3.55e-07;9!UBERON:0010260;3.55e-07;9!UBERON:0000042;3.55e-07;9!UBERON:0003914;9.87e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.27e-25,42;UBERON:0003509,1.27e-25,42;UBERON:0004572,1.27e-25,42;UBERON:0007500,8.57e-20,59;UBERON:0001981,8.57e-20,59;UBERON:0004537,8.57e-20,59;UBERON:0006965,8.57e-20,59;UBERON:0004573,1.17e-19,33;UBERON:0004571,1.17e-19,33;UBERON:0004872,2.70e-16,83;UBERON:0000055,2.73e-16,68;UBERON:0003834,4.65e-14,5;UBERON:0001533,4.65e-14,5;UBERON:0003513,9.55e-14,7;UBERON:0000947,1.70e-13,21;UBERON:0010191,1.70e-13,21;UBERON:0002049,2.27e-13,78;UBERON:0007798,2.27e-13,78;UBERON:0004237,7.35e-13,10;UBERON:0004695,7.35e-13,10;UBERON:0002111,7.35e-13,10;UBERON:0004178,7.35e-13,10;UBERON:0000415,5.18e-11,4;UBERON:0007240,5.18e-11,4;UBERON:0005742,5.18e-11,4;UBERON:0005734,5.18e-11,4;UBERON:0004664,5.18e-11,4;UBERON:0004663,5.18e-11,4;UBERON:0001310,5.46e-11,4;UBERON:0003688,6.15e-11,6;UBERON:0002358,6.15e-11,6;UBERON:0003684,6.15e-11,6;UBERON:0001178,6.15e-11,6;UBERON:0001134,8.29e-11,62;UBERON:0002036,8.29e-11,62;UBERON:0003082,8.29e-11,62;UBERON:0002385,2.56e-10,64;UBERON:0001015,2.56e-10,64;UBERON:0000383,2.56e-10,64;UBERON:0004535,1.18e-09,109;UBERON:0007524,1.79e-09,73;UBERON:0001009,3.19e-09,112;UBERON:0000992,7.62e-09,13;UBERON:0002329,7.81e-09,71;UBERON:0003059,7.81e-09,71;UBERON:0007282,7.81e-09,71;UBERON:0004290,7.81e-09,71;UBERON:0009618,7.81e-09,71;UBERON:0002118,1.07e-08,5;UBERON:0003077,1.20e-08,72;UBERON:0007285,1.20e-08,72;UBERON:0003914,1.48e-08,117;UBERON:0001135,3.59e-08,15;UBERON:0000486,9.40e-08,83;UBERON:0007503,1.25e-07,78;UBERON:0010260,5.98e-07,9;UBERON:0005406,7.05e-07,2 | |||
|phase1_expression=1.2717486548939,0.428201047781966,1.69145284915165,1.0007329835313,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0.263766978228454,0,0,1.34465029290355,3.01347264011988,2.92124036154949,2.92759679274304,0,0.612002073732759,0.313454721478088,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.283604451492204,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,2.27934920996244,1.32409180813219,3.15520282823695,1.77334191099179,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0,1.18800285728205,0.989067717114227,0,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.89694817844431,0.640672166455702,0.423863802319124,0.300091096084402,0.92747276314595,0.257640540045629,0.744467425326359,0.675105328965065,1.07180705677318,0.252433774244115,0.184099797284599,1.13152239773168,0.355009592516614,0.806016785821122,0.169560592310488,0.966304265816484,1.09098448236334,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.245976877086227,0.343135620597051,0.219500570817251,0,1.00528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.447792613514241,0.871901815541886,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.51336800074665,3.10252117818667,0,0,1.59562869950922,1.04007436911366,0,0,0,0,0,0,0,0,0,3.31583314765545,0.871533458600294,1.29964888536674,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.585707074963566,1.20378439891088,2.27407504055985,1.03473071292505,1.32845119707087,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,2.23297027036899,0.920771839728375,0.841980283299221,2.17836553734692,2.55853624533352,3.53878626515936,2.96836132889982,0.771048469013278,1.06537035187876,0.328508624055237,1.55776328755086,1.04589340613963,0,0,0.368323955743585,0.68888668898764,0.546273504020151,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,3.21367859688319,0.676695028044854,0,0,0,0.107420244868274,0.145016693914229,0,0.623224249527161,0,0,0,0,2.78907329578371,4.40737285562896,2.0911118104818,0.308033580176089,0.532306030317022,0,0.55597265731176,0.429374660225974,0,0.316379424718726,0.38126038784765,0,0,1.27281299170375,0,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,0.842516912477962,0,3.1682753652067,2.11300293513511,0.545999645631943,0.707027159768564,3.39024349860728,2.2054613741845,2.65375590096488,3.06915619677634,0.578775534266688,0.655894752046633,2.02910376962704,2.16876448669825,1.12678241012897,1.00387946542836,0.982490410131212,3.92338156629375,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0.503865495708552,0.20453736500431,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.216388639742091,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0,2.41981432097328,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0.794858446811959,0,0,0.320635281006135,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.418411385249333,0,0.577901179803038,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.681017030557878,0,0,0,0,0,0.182248669974074,0,0.315222829196793,0.367182116944987,0.316801009558219,0,0.767660789277781,0,0,0,1.62899880526114,0.864221491201268,1.63293680054705,0,0.164185041498678,1.36310417428337,0.113312091520126,0.146552233678082,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.189403005275089,0.251567901752575,0,0.915360273587694,2.11723293268535,2.0206836075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| ||
|short_description=p11@TMEM200A | |short_description=p11@TMEM200A | ||
}} | }} |
Latest revision as of 17:31, 24 September 2015
Short description: | p11@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.81e-26 | 32 |
smooth muscle cell | 8.09e-18 | 43 |
smooth muscle myoblast | 8.09e-18 | 43 |
smooth muscle cell of the subclavian artery | 4.65e-14 | 5 |
preadipocyte | 7.14e-13 | 12 |
aortic smooth muscle cell | 7.35e-13 | 10 |
muscle cell | 8.22e-13 | 55 |
muscle precursor cell | 6.84e-12 | 58 |
myoblast | 6.84e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.84e-12 | 58 |
electrically responsive cell | 4.59e-11 | 61 |
electrically active cell | 4.59e-11 | 61 |
fibroblast of tunica adventitia of artery | 5.18e-11 | 4 |
fibroblast of the aortic adventitia | 5.18e-11 | 4 |
smooth muscle cell of the umbilical artery | 5.46e-11 | 4 |
omentum preadipocyte | 3.39e-09 | 3 |
somatic stem cell | 1.16e-08 | 433 |
multi fate stem cell | 1.89e-08 | 427 |
stem cell | 3.04e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.96e-17 | 14 |
female reproductive organ cancer | 9.31e-08 | 27 |
reproductive organ cancer | 4.39e-07 | 29 |