FFCP PHASE1:Hg19::chr19:41119846..41119862,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:41119846..41119862,+
|short_description=p7@LTBP4
|description=CAGE_peak_7_at_LTBP4_5end
|association_with_transcript=24bp_to_uc002oom.1_5end
|EntrezGene=...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8425 | |EntrezGene=8425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |HGNC=6717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_uc002oom.1_5end | |||
|cluster_id=chr19:41119846..41119862,+ | |||
|coexpression_cluster_id=C3791 | |||
|description=CAGE_peak_7_at_LTBP4_5end | |||
|id=chr19:41119846..41119862,+ | |||
|ontology_enrichment_celltype=CL:0002371!6.32e-11!591;CL:0000144!6.57e-11!625;CL:0000057!2.37e-10!75;CL:0000055!6.34e-10!180;CL:0000723!3.69e-07!436;CL:0000012!4.96e-07!682;CL:0000548!6.44e-07!679;CL:0000004!6.44e-07!679;CL:0000255!6.44e-07!679;CL:0000034!7.32e-07!444;CL:0000192!9.42e-07!42;CL:0000514!9.42e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.86e-10,76;CL:0000192,8.54e-08,43;CL:0000514,8.54e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!9.49e-15!95;UBERON:0001444!6.53e-09!48;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.26e-17,99;UBERON:0000033,5.18e-11,56;UBERON:0001444,6.51e-10,49;UBERON:0000153,2.71e-09,62;UBERON:0007811,2.71e-09,62;UBERON:0002199,2.98e-07,46;UBERON:0002416,2.98e-07,46 | |||
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| ||
|short_description=p7@LTBP4 | |||
}} | }} |
Latest revision as of 02:36, 18 September 2015
Short description: | p7@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LTBP4_5end |
Coexpression cluster: | C3791_Mesenchymal_Trabecular_Fibroblast_Prostate_Smooth_Nucleus_sacrococcigeal |
Association with transcript: | 24bp_to_uc002oom.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.86e-10 | 76 |
smooth muscle cell | 8.54e-08 | 43 |
smooth muscle myoblast | 8.54e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.26e-17 | 99 |
head | 5.18e-11 | 56 |
subdivision of head | 6.51e-10 | 49 |
anterior region of body | 2.71e-09 | 62 |
craniocervical region | 2.71e-09 | 62 |
integument | 2.98e-07 | 46 |
integumental system | 2.98e-07 | 46 |