FFCP PHASE1:Hg19::chr6:35200689..35200695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222663 | |EntrezGene=222663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13655 | |HGNC=13655 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IX30 | |UniProt=Q8IX30 | ||
|association_with_transcript=61bp_to_CR936607_5end | |association_with_transcript=61bp_to_CR936607_5end | ||
|cluster_id=chr6:35200689..35200695,+ | |||
|coexpression_cluster_id=C519 | |coexpression_cluster_id=C519 | ||
|description=CAGE_peak_9_at_SCUBE3_5end | |description=CAGE_peak_9_at_SCUBE3_5end | ||
|id=chr6:35200689..35200695,+ | |id=chr6:35200689..35200695,+ | ||
|ontology_enrichment_celltype=CL:0002334!7.84e-18!12;CL:0000055!2.36e-15!180;CL:0000188!2.52e-14!9;CL:0000057!2.64e-14!75;CL:0002620!2.15e-11!23;CL:0000136!3.80e-09!15;CL:0002580!8.28e-07!3;CL:0000135!9.80e-07!3;CL:0000386!9.80e-07!3;CL:0000388!9.80e-07!3 | |ontology_enrichment_celltype=CL:0002334!7.84e-18!12;CL:0000055!2.36e-15!180;CL:0000188!2.52e-14!9;CL:0000057!2.64e-14!75;CL:0002620!2.15e-11!23;CL:0000136!3.80e-09!15;CL:0002580!8.28e-07!3;CL:0000135!9.80e-07!3;CL:0000386!9.80e-07!3;CL:0000388!9.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.94e-20;12!CL:0000136;2.30e-18;13!CL:0002583;4.40e-15;2!CL:0002617;2.28e-14;2!CL:0002615;4.47e-10;3!CL:0002580;5.01e-10;3!CL:0000135;5.36e-10;3!CL:0000388;5.36e-10;3!CL:0002379;2.70e-08;1!CL:0002616;3.45e-08;1!CL:0000228;7.09e-08;1!CL:0002581;7.09e-08;1!CL:0002372;7.09e-08;1!CL:0000056;1.28e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.00e-21,15;CL:0002334,4.16e-20,12;CL:0002583,4.56e-15,2;CL:0002617,1.93e-14,2;CL:0002615,5.24e-10,3;CL:0000135,5.49e-10,3;CL:0000388,5.49e-10,3;CL:0002580,6.28e-10,3;CL:0002379,2.71e-08,1;CL:0002616,3.11e-08,1;CL:0002581,5.40e-08,1;CL:0000228,6.63e-08,1;CL:0002372,6.63e-08,1;CL:0000515,1.22e-07,4;CL:0000057,3.75e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000515;1.28e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;2.70e-08;1!DOID:3565;2.70e-08;1!DOID:3369;2.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.52e-08,1;DOID:3620,2.71e-08,1;DOID:3565,2.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.20e-10!6;UBERON:0002358!1.20e-10!6;UBERON:0003684!1.20e-10!6;UBERON:0001178!1.20e-10!6;UBERON:0002199!1.90e-10!45;UBERON:0002416!1.90e-10!45;UBERON:0002097!4.13e-08!40;UBERON:0001013!9.99e-08!14;UBERON:0000043!9.80e-07!3 | |ontology_enrichment_uberon=UBERON:0003688!1.20e-10!6;UBERON:0002358!1.20e-10!6;UBERON:0003684!1.20e-10!6;UBERON:0001178!1.20e-10!6;UBERON:0002199!1.90e-10!45;UBERON:0002416!1.90e-10!45;UBERON:0002097!4.13e-08!40;UBERON:0001013!9.99e-08!14;UBERON:0000043!9.80e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.28e-14;2!UBERON:0002072;3.02e-13;5!UBERON:0001013;8.51e-12;14!UBERON:0000310;5.46e-11;10!UBERON:0001443;5.30e-10;11!UBERON:0007846;5.36e-10;3!UBERON:0000043;5.36e-10;3!UBERON:0007845;5.36e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.57e-14,2;UBERON:0002072,3.15e-13,5;UBERON:0001013,6.77e-12,14;UBERON:0000310,5.84e-11,10;UBERON:0007846,5.49e-10,3;UBERON:0000043,5.49e-10,3;UBERON:0007845,5.49e-10,3;UBERON:0001443,5.63e-10,11 | |||
|phase1_expression=1.45342703416445,2.5692062866918,0.281908808191942,8.00586386825043,1.34088328328186,2.61701557230111,5.06599756336621,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,3.97577561356255,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.89694817844431,0.427114777637135,0,0.600182192168805,0.103052529238439,1.03056216018252,0,0.337552664482532,1.26668106709558,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,1.690605505112,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,2.60606352001643,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,2.27407504055985,0,0,1.65932251687533,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,1.24053903909388,0.920771839728375,6.45518217196069,0.256278298511402,0.511707249066704,0.804269605718038,1.48418066444991,8.48153315914606,3.19611105563629,0.492762936082855,0,7.55367459989735,0,0,0,0,1.0925470080403,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,1.07834031980251,0.767518373630648,0.413509717453592,0.322260734604821,0.870100163485371,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0.864221491201268,1.63293680054705,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,3.2937214757744,0,0,0.447764408660622,0,0.554805861502613,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,1.79055697645231,0.237840181555137,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,5.19151874548547,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=1.45342703416445,2.5692062866918,0.281908808191942,8.00586386825043,1.34088328328186,2.61701557230111,5.06599756336621,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,3.97577561356255,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.89694817844431,0.427114777637135,0,0.600182192168805,0.103052529238439,1.03056216018252,0,0.337552664482532,1.26668106709558,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,1.690605505112,0,0,0,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,2.60606352001643,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,2.27407504055985,0,0,1.65932251687533,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,1.24053903909388,0.920771839728375,6.45518217196069,0.256278298511402,0.511707249066704,0.804269605718038,1.48418066444991,8.48153315914606,3.19611105563629,0.492762936082855,0,7.55367459989735,0,0,0,0,1.0925470080403,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,1.07834031980251,0.767518373630648,0.413509717453592,0.322260734604821,0.870100163485371,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0.662091970365432,0,0,0.864221491201268,1.63293680054705,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,3.2937214757744,0,0,0.447764408660622,0,0.554805861502613,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,1.79055697645231,0.237840181555137,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,5.19151874548547,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.190941474834495,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@SCUBE3 | |short_description=p9@SCUBE3 | ||
}} | }} |
Latest revision as of 10:19, 18 September 2015
Short description: | p9@SCUBE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SCUBE3_5end |
Coexpression cluster: | C519_Preadipocyte_Ewing_Myoblast_spindle_Fibroblast_Adipocyte_Osteoblast |
Association with transcript: | 61bp_to_CR936607_5end |
EntrezGene: | SCUBE3 |
HGNC: | 13655 |
UniProt: | Q8IX30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.00e-21 | 15 |
preadipocyte | 4.16e-20 | 12 |
subcutaneous preadipocyte | 4.56e-15 | 2 |
adipocyte of breast | 1.93e-14 | 2 |
adipocyte of omentum tissue | 5.24e-10 | 3 |
fibrocyte | 5.49e-10 | 3 |
tendon cell | 5.49e-10 | 3 |
preadipocyte of the breast | 6.28e-10 | 3 |
meningothelial cell | 2.71e-08 | 1 |
perirenal adipocyte cell | 3.11e-08 | 1 |
perirenal preadipocyte | 5.40e-08 | 1 |
multinucleate cell | 6.63e-08 | 1 |
myotube | 6.63e-08 | 1 |
skeletal muscle myoblast | 1.22e-07 | 4 |
fibroblast | 3.75e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.57e-14 | 2 |
hypodermis | 3.15e-13 | 5 |
adipose tissue | 6.77e-12 | 14 |
breast | 5.84e-11 | 10 |
dense regular connective tissue | 5.49e-10 | 3 |
tendon | 5.49e-10 | 3 |
regular connective tissue | 5.49e-10 | 3 |
chest | 5.63e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.52e-08 | 1 |
central nervous system cancer | 2.71e-08 | 1 |
meningioma | 2.71e-08 | 1 |