FFCP PHASE1:Hg19::chr19:42259486..42259495,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:42259486..42259495,+
|short_description=p3@CEACAM6
|description=CAGE_peak_3_at_CEACAM6_5end
|association_with_transcript=88bp_to_NM_002483,uc002orm.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4680 | |EntrezGene=4680 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1818 | |HGNC=1818 | ||
|TSSclassifier=strong | |||
|UniProt=P40199 | |UniProt=P40199 | ||
|association_with_transcript=88bp_to_NM_002483,uc002orm.2_5end | |||
|cluster_id=chr19:42259486..42259495,+ | |||
|coexpression_cluster_id=C742 | |||
|description=CAGE_peak_3_at_CEACAM6_5end | |||
|id=chr19:42259486..42259495,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.96e-19!43;CL:0000223!8.09e-14!59;CL:0002251!1.68e-11!21;CL:0002368!2.67e-08!13;CL:0002231!5.65e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;7.99e-11;13!CL:0002076;1.10e-09;42!CL:0002178;6.59e-09;3!CL:0000167;1.91e-07;1!CL:0000164;1.91e-07;1!CL:0000502;1.91e-07;1!CL:0000172;1.91e-07;1!CL:0000173;1.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.72e-12,42;CL:0002368,6.52e-11,13;CL:0002178,6.09e-09,3;CL:0000223,2.50e-08,58;CL:0000167,2.09e-07,1;CL:0000164,2.09e-07,1;CL:0000502,2.09e-07,1;CL:0000172,2.09e-07,1;CL:0000173,2.09e-07,1;CL:0002351,2.09e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.98e-08;86!UBERON:0006242;1.05e-07;1!UBERON:0009143;1.40e-07;1!CL:0002351;1.91e-07;1!UBERON:0006298;3.11e-07;1!UBERON:0001045;5.50e-07;1!UBERON:0008801;5.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.90e-30!169;UBERON:0000925!5.90e-30!169;UBERON:0006595!5.90e-30!169;UBERON:0001007!2.04e-26!155;UBERON:0001555!2.04e-26!155;UBERON:0007026!2.04e-26!155;UBERON:0004921!4.86e-25!129;UBERON:0004185!4.86e-25!129;UBERON:0001004!3.36e-20!72;UBERON:0000077!1.25e-18!130;UBERON:0000161!3.98e-17!35;UBERON:0000166!6.33e-14!21;UBERON:0001041!9.31e-12!98;UBERON:0000065!1.34e-11!53;UBERON:0005409!5.92e-11!35;UBERON:0003408!1.08e-10!10;UBERON:0001044!2.96e-10!6;UBERON:0003293!2.96e-10!6;UBERON:0003294!2.96e-10!6;UBERON:0010047!2.96e-10!6;UBERON:0000167!2.96e-10!6;UBERON:0005911!4.46e-10!82;UBERON:0001046!5.11e-10!19;UBERON:0000165!9.96e-10!28;UBERON:0000930!9.96e-10!28;UBERON:0000160!3.19e-09!27;UBERON:0000344!1.20e-08!12;UBERON:0000481!3.84e-08!347;UBERON:0000464!9.09e-08!104;UBERON:0000974!9.87e-08!10;UBERON:0004907!1.06e-07!5;UBERON:0000078!1.55e-07!18;UBERON:0000466!1.84e-07!126;UBERON:0006562!2.91e-07!11;UBERON:0003104!3.34e-07!238;UBERON:0009142!3.34e-07!238;UBERON:0000059!3.69e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.56e-16;33!UBERON:0001041;7.82e-15;14!UBERON:0006562;5.27e-13;2!UBERON:0001829;1.50e-12;2!UBERON:0001044;2.12e-09;6!UBERON:0003293;2.12e-09;6!UBERON:0003294;2.12e-09;6!UBERON:0010047;2.12e-09;6!UBERON:0003408;2.12e-09;6!UBERON:0000167;2.12e-09;6!UBERON:0002110;2.89e-09;3!UBERON:0002294;1.48e-08;7!UBERON:0001173;1.48e-08;7!UBERON:0002372;3.11e-07;1!UBERON:0001736;3.11e-07;1!UBERON:0002171;3.11e-07;1!UBERON:0001961;3.11e-07;1!UBERON:0001744;3.11e-07;1!UBERON:0006518;3.11e-07;1!UBERON:0008949;3.11e-07;1!UBERON:0000101;3.11e-07;1!UBERON:0001042;3.11e-07;1!UBERON:0002167;3.11e-07;1!UBERON:0001735;3.11e-07;1!UBERON:0001154;5.50e-07;1!UBERON:0001831;5.50e-07;1!UBERON:0001153;5.50e-07;1!UBERON:0009854;5.50e-07;1!UBERON:0001567;5.50e-07;1!UBERON:0000065;9.37e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.02e-19,160;UBERON:0000925,1.02e-19,160;UBERON:0006595,1.02e-19,160;UBERON:0004921,9.75e-16,118;UBERON:0001007,3.62e-15,145;UBERON:0001555,3.62e-15,145;UBERON:0007026,3.62e-15,145;UBERON:0001004,9.39e-13,74;UBERON:0001829,1.95e-12,2;UBERON:0001041,2.62e-12,87;UBERON:0000065,3.41e-11,54;UBERON:0001044,2.19e-09,6;UBERON:0003293,2.19e-09,6;UBERON:0003294,2.19e-09,6;UBERON:0010047,2.19e-09,6;UBERON:0000167,2.19e-09,6;UBERON:0002110,2.96e-09,3;UBERON:0006242,2.96e-09,3;UBERON:0002372,2.67e-07,1;UBERON:0001961,2.67e-07,1;UBERON:0001744,2.67e-07,1;UBERON:0001735,2.67e-07,1;UBERON:0001736,3.02e-07,1;UBERON:0006298,3.02e-07,1;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0001154,6.97e-07,1;UBERON:0001153,6.97e-07,1;UBERON:0001045,6.97e-07,1;UBERON:0001831,7.40e-07,1;UBERON:0001567,7.40e-07,1;UBERON:0008801,7.40e-07,1;UBERON:0002294,9.81e-07,9;UBERON:0001173,9.81e-07,9;UBERON:0004912,9.81e-07,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.601519410909855,3.86740153530765,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,2.88285101047659,1.78657797492418,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,3.29503302718727,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0.500547425135725,0.19538809540204,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,1.10513566212459,0,0,0,0,0,6.80280463767315,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,2.00070672109872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.265372693510018,3.05515072466813,0,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9832091871662,0,2.48578814858586,0,0,0,3.71547627196126,0,13.2340856738399,0,7.34861127485941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,65.5477970754505,11.1058909070402,0.157204305099666,2.07119527673598,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,2.10690799240304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.733714394086716,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0.496211178389294,0,3.83287282918786,0,0,0,0.227662191351298,0,0,0,0,0,0,0.222462803784138,0,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,3.8720462293825,0,0,0,0,0,0,0,1.66855397145913,0.121917924982269,0,0,0,0,0,0,0,0.67767649223376,0,0,0.617393264863557,0.218559560503957,0,0,3.53514820652439,0,0,0,0,0,0.257831551894309,0,0,0,0,0,2.75237570042724,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98527574661373,0.714193294391221,0.0645889098360061,0.248298857183432,0,0,0,1.74173398317569,0.684466602170562,2.96349033264185,8.31977582555046,0.99798106963804,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CEACAM6 | |||
}} | }} |
Latest revision as of 06:23, 18 September 2015
Short description: | p3@CEACAM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CEACAM6_5end |
Coexpression cluster: | C742_lung_gastric_trachea_bile_esophagus_gall_neuroectodermal |
Association with transcript: | 88bp_to_NM_002483, uc002orm.2_5end |
EntrezGene: | CEACAM6 |
HGNC: | 1818 |
UniProt: | P40199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.72e-12 | 42 |
respiratory epithelial cell | 6.52e-11 | 13 |
epithelial cell of stomach | 6.09e-09 | 3 |
endodermal cell | 2.50e-08 | 58 |
peptide hormone secreting cell | 2.09e-07 | 1 |
enteroendocrine cell | 2.09e-07 | 1 |
type D enteroendocrine cell | 2.09e-07 | 1 |
somatostatin secreting cell | 2.09e-07 | 1 |
pancreatic D cell | 2.09e-07 | 1 |
progenitor cell of endocrine pancreas | 2.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.09e-07 | 1 |