FFCP PHASE1:Hg19::chr6:56488575..56488587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56488575..56488587,- | |||
|coexpression_cluster_id=C458 | |coexpression_cluster_id=C458 | ||
|description=CAGE_peak_at_chr6:56488575..56488587,- | |description=CAGE_peak_at_chr6:56488575..56488587,- | ||
|id=chr6:56488575..56488587,- | |id=chr6:56488575..56488587,- | ||
|ontology_enrichment_celltype=CL:0000223!1.64e-08!59;CL:0002076!2.83e-08!43;CL:0000066!8.78e-08!254 | |ontology_enrichment_celltype=CL:0000223!1.64e-08!59;CL:0002076!2.83e-08!43;CL:0000066!8.78e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.05e-85;3!CL:0000622;1.63e-51;5!CL:0000154;4.21e-43;6!CL:0000150;4.65e-29;9!CL:0002076;2.89e-15;42!CL:0002251;1.55e-13;20!CL:0002231;9.90e-11;3!CL:0000151;2.35e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.04e-85,3;CL:0000622,1.37e-51,5;CL:0000154,3.65e-43,6;CL:0000150,4.23e-29,9;CL:0000223,8.36e-18,58;CL:0002076,3.12e-17,42;CL:0002251,1.49e-13,20;CL:0002231,8.17e-11,3;CL:0000151,7.77e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000223;7.32e-11;58 | |||
|ontology_enrichment_disease=DOID:0050687!4.02e-07!143 | |ontology_enrichment_disease=DOID:0050687!4.02e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.21e-43;6!UBERON:0003293;4.21e-43;6!UBERON:0003294;4.21e-43;6!UBERON:0010047;4.21e-43;6!UBERON:0003408;4.21e-43;6!UBERON:0000167;4.21e-43;6!UBERON:0001041;5.39e-19;14!UBERON:0002365;1.22e-15;31!UBERON:0002330;1.22e-15;31!UBERON:0000161;3.31e-14;19!UBERON:0000166;3.31e-14;19!UBERON:0000165;7.13e-10;28!UBERON:0002530;1.64e-07;57!UBERON:0004921;1.92e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.65e-43,6;UBERON:0003293,3.65e-43,6;UBERON:0003294,3.65e-43,6;UBERON:0010047,3.65e-43,6;UBERON:0000167,3.65e-43,6;UBERON:0003408,2.78e-26,10;UBERON:0002365,3.88e-15,31;UBERON:0002330,3.88e-15,31;UBERON:0000161,3.64e-13,36;UBERON:0000166,2.17e-12,22;UBERON:0002530,2.28e-12,59;UBERON:0000165,1.44e-09,29;UBERON:0000930,1.44e-09,29 | |||
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| ||
|short_description=p@chr6:56488575..56488587,- | |short_description=p@chr6:56488575..56488587,- | ||
}} | }} |
Latest revision as of 02:30, 31 July 2015
Short description: | p@chr6:56488575..56488587, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:56488575..56488587, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.04e-85 | 3 |
acinar cell | 1.37e-51 | 5 |
protein secreting cell | 3.65e-43 | 6 |
glandular epithelial cell | 4.23e-29 | 9 |
endodermal cell | 8.36e-18 | 58 |
endo-epithelial cell | 3.12e-17 | 42 |
epithelial cell of alimentary canal | 1.49e-13 | 20 |
epithelial cell of prostate | 8.17e-11 | 3 |
secretory cell | 7.77e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.65e-43 | 6 |
gland of oral region | 3.65e-43 | 6 |
gland of foregut | 3.65e-43 | 6 |
oral gland | 3.65e-43 | 6 |
oral cavity | 3.65e-43 | 6 |
gland of gut | 2.78e-26 | 10 |
exocrine gland | 3.88e-15 | 31 |
exocrine system | 3.88e-15 | 31 |
orifice | 3.64e-13 | 36 |
oral opening | 2.17e-12 | 22 |
gland | 2.28e-12 | 59 |
mouth | 1.44e-09 | 29 |
stomodeum | 1.44e-09 | 29 |