FFCP PHASE1:Hg19::chr7:45952458..45952470,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=156bp_to_AF370418_5end | |association_with_transcript=156bp_to_AF370418_5end | ||
|cluster_id=chr7:45952458..45952470,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_12_at_IGFBP3_5end | |description=CAGE_peak_12_at_IGFBP3_5end | ||
|id=chr7:45952458..45952470,- | |id=chr7:45952458..45952470,- | ||
|ontology_enrichment_celltype=CL:0000055!5.30e-11!180;CL:0002620!8.24e-10!23;CL:0000057!2.03e-09!75;CL:0000499!2.77e-07!27;CL:0000153!4.95e-07!9;CL:0000447!4.95e-07!9;CL:0002595!8.22e-07!5 | |ontology_enrichment_celltype=CL:0000055!5.30e-11!180;CL:0002620!8.24e-10!23;CL:0000057!2.03e-09!75;CL:0000499!2.77e-07!27;CL:0000153!4.95e-07!9;CL:0000447!4.95e-07!9;CL:0002595!8.22e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.68e-22;23!CL:0000153;4.08e-12;9!CL:0000447;4.08e-12;9!CL:0000499;1.69e-10;28!CL:0002595;1.27e-09;5!CL:0000135;2.29e-09;3!CL:0000388;2.29e-09;3!CL:0000327;4.47e-09;15!CL:0002537;6.07e-09;5!CL:0000138;7.28e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.49e-22,23;CL:0000057,7.95e-14,76;CL:0000153,4.34e-12,9;CL:0000447,4.34e-12,9;CL:0000499,1.66e-10,28;CL:0002595,1.60e-09,5;CL:0000135,1.91e-09,3;CL:0000388,1.91e-09,3;CL:0000048,2.40e-09,427;CL:0000327,3.98e-09,15;CL:0000723,4.99e-09,433;CL:0002537,6.64e-09,5;CL:0000058,7.37e-09,6;CL:0000138,7.37e-09,6;CL:0000034,1.28e-08,441;CL:0000134,3.02e-07,354;CL:0002320,6.79e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.77e-07!5;DOID:450!2.77e-07!5;DOID:66!2.77e-07!5;DOID:423!2.77e-07!5;DOID:0080000!2.77e-07!5;DOID:11722!2.77e-07!5 | |ontology_enrichment_disease=DOID:17!2.77e-07!5;DOID:450!2.77e-07!5;DOID:66!2.77e-07!5;DOID:423!2.77e-07!5;DOID:0080000!2.77e-07!5;DOID:11722!2.77e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;5.14e-15;5!DOID:450;5.14e-15;5!DOID:66;5.14e-15;5!DOID:423;5.14e-15;5!DOID:0080000;5.14e-15;5!DOID:11722;5.14e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.32e-15,5;DOID:450,5.32e-15,5;DOID:66,5.32e-15,5;DOID:423,5.32e-15,5;DOID:0080000,5.32e-15,5;DOID:11722,5.32e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.49e-07!40;UBERON:0003688!4.42e-07!6;UBERON:0002358!4.42e-07!6;UBERON:0003684!4.42e-07!6;UBERON:0001178!4.42e-07!6;UBERON:0003834!8.22e-07!5;UBERON:0001533!8.22e-07!5;UBERON:0002199!8.34e-07!45;UBERON:0002416!8.34e-07!45;UBERON:0005631!9.56e-07!14;UBERON:0000158!9.56e-07!14 | |ontology_enrichment_uberon=UBERON:0002097!1.49e-07!40;UBERON:0003688!4.42e-07!6;UBERON:0002358!4.42e-07!6;UBERON:0003684!4.42e-07!6;UBERON:0001178!4.42e-07!6;UBERON:0003834!8.22e-07!5;UBERON:0001533!8.22e-07!5;UBERON:0002199!8.34e-07!45;UBERON:0002416!8.34e-07!45;UBERON:0005631!9.56e-07!14;UBERON:0000158!9.56e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.11e-11;41!UBERON:0004457;6.61e-11;9!UBERON:0000042;6.61e-11;9!UBERON:0005631;9.14e-10;10!UBERON:0000158;9.14e-10;10!UBERON:0003834;1.27e-09;5!UBERON:0001533;1.27e-09;5!UBERON:0007846;2.29e-09;3!UBERON:0000043;2.29e-09;3!UBERON:0007845;2.29e-09;3!UBERON:0002199;3.44e-09;46!UBERON:0002416;3.44e-09;46!UBERON:0003688;1.21e-07;6!UBERON:0002358;1.21e-07;6!UBERON:0003684;1.21e-07;6!UBERON:0001178;1.21e-07;6!UBERON:0003513;7.37e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.66e-14,41;UBERON:0002199,2.64e-12,46;UBERON:0002416,2.64e-12,46;UBERON:0003834,1.60e-09,5;UBERON:0001533,1.60e-09,5;UBERON:0007846,1.91e-09,3;UBERON:0000043,1.91e-09,3;UBERON:0007845,1.91e-09,3;UBERON:0004871,2.78e-08,8;UBERON:0004457,6.41e-08,12;UBERON:0000042,6.41e-08,12;UBERON:0003688,1.46e-07,6;UBERON:0002358,1.46e-07,6;UBERON:0003684,1.46e-07,6;UBERON:0001178,1.46e-07,6;UBERON:0002384,6.52e-07,371;UBERON:0003513,8.63e-07,7;UBERON:0005631,9.53e-07,14;UBERON:0000158,9.53e-07,14 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.40954404095971,6.00439790118782,0.446961094427288,4.36169262050184,0,0,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,43.372698286148,24.0642197105227,28.1002246783998,0.795285947051099,11.6792368872633,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0,0.860509862246441,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,1.22595118319608,0.150238058906597,0,6.99619579186562,3.41691822109708,3.17897851739343,12.3037349394605,2.37020817248409,4.3798891807757,5.21127197728451,1.0126579934476,1.85130309806277,12.6216887122057,3.49789614840738,0.80823028409406,13.845374108148,5.74286959897549,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,1.30303176000821,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,1.24900292158013,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0.992431231275107,1.53461973288062,2.80660094433074,0.512556597022804,2.04682899626681,1.12597744800525,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,5.35180989612088,0,0.308033580176089,0,0,1.11194531462352,1.43124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0.54907405947211,0,0,3.17020642346017,0,0.975267478179181,0.974853958525138,4.22600587027022,0,0,2.26016233240486,1.10273068709225,3.98063385144732,7.45366504931397,0,0,0,0,0,0,0,0,0,3.37772216476263,4.28083360847872,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,1.78178808499583,2.15012491469462,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,16.174058558414,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38002319463839,0.0915975934018623,11.72676507241,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.176915129006678,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,1.04135843001079,0,0,0.17472666824203,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,3.39676336289621,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0,0,0.717149357331379,0,0.714695326373367,0,0.25426853765475,1.62899880526114,2.5926644736038,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,1.40227985908335,1.10961172300523,1.51522404220071,2.76724691927833,3.55924488638614,0.457680136793847,3.17584939902802,0.466311601748341,0.147855149989634,0,0,0,0.414706207840855,0,0,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0.464033759878494,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0.680117776536817,0,0,1.61179956973339,0.617602894321944,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0.425149840203366,0,0,0.954013051960256,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0.766574565837572,0,0,0,0,0.975726071789027,0,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,4.75040700680967,16.2435573881597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671132590786754,0,0.121917924982269,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,1.86919826156599,0,0,0,1.07132363163395,0,0.0802413666891683,0,0,0,0,0,0,0,1.48798007266701,5.54610754357702,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0.106727345877715,0,0.449126010532934,0,0.366724332548599,0,0,0,0 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| ||
|short_description=p12@IGFBP3 | |short_description=p12@IGFBP3 | ||
}} | }} |
Latest revision as of 19:20, 18 September 2015
Short description: | p12@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 156bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.49e-22 | 23 |
fibroblast | 7.95e-14 | 76 |
GAG secreting cell | 4.34e-12 | 9 |
carbohydrate secreting cell | 4.34e-12 | 9 |
stromal cell | 1.66e-10 | 28 |
smooth muscle cell of the subclavian artery | 1.60e-09 | 5 |
fibrocyte | 1.91e-09 | 3 |
tendon cell | 1.91e-09 | 3 |
multi fate stem cell | 2.40e-09 | 427 |
extracellular matrix secreting cell | 3.98e-09 | 15 |
somatic stem cell | 4.99e-09 | 433 |
amnion mesenchymal stem cell | 6.64e-09 | 5 |
chondroblast | 7.37e-09 | 6 |
chondrocyte | 7.37e-09 | 6 |
stem cell | 1.28e-08 | 441 |
mesenchymal cell | 3.02e-07 | 354 |
connective tissue cell | 6.79e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.66e-14 | 41 |
integument | 2.64e-12 | 46 |
integumental system | 2.64e-12 | 46 |
thoracic segment blood vessel | 1.60e-09 | 5 |
subclavian artery | 1.60e-09 | 5 |
dense regular connective tissue | 1.91e-09 | 3 |
tendon | 1.91e-09 | 3 |
regular connective tissue | 1.91e-09 | 3 |
somatic layer of lateral plate mesoderm | 2.78e-08 | 8 |
cavity lining | 6.41e-08 | 12 |
serous membrane | 6.41e-08 | 12 |
omentum | 1.46e-07 | 6 |
peritoneum | 1.46e-07 | 6 |
abdominal cavity | 1.46e-07 | 6 |
visceral peritoneum | 1.46e-07 | 6 |
connective tissue | 6.52e-07 | 371 |
trunk blood vessel | 8.63e-07 | 7 |
extraembryonic membrane | 9.53e-07 | 14 |
membranous layer | 9.53e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.32e-15 | 5 |
myotonic disease | 5.32e-15 | 5 |
muscle tissue disease | 5.32e-15 | 5 |
myopathy | 5.32e-15 | 5 |
muscular disease | 5.32e-15 | 5 |
myotonic dystrophy | 5.32e-15 | 5 |