FFCP PHASE1:Hg19::chr19:4559720..4559799,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:4559720..4559799,-
|short_description=p1@SEMA6B
|description=CAGE_peak_1_at_SEMA6B_5end
|association_with_transcript=0bp_to_NM_032108,uc010dud.2,uc010xih....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10501 | |EntrezGene=10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10739 | |HGNC=10739 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3T3 | |UniProt=Q9H3T3 | ||
|association_with_transcript=0bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |||
|cluster_id=chr19:4559720..4559799,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_1_at_SEMA6B_5end | |||
|id=chr19:4559720..4559799,- | |||
|ontology_enrichment_celltype=CL:0000766!4.95e-29!76;CL:0002009!4.31e-27!65;CL:0002194!8.69e-27!63;CL:0000576!8.69e-27!63;CL:0000040!8.69e-27!63;CL:0000559!8.69e-27!63;CL:0000763!4.80e-25!112;CL:0000049!4.80e-25!112;CL:0000557!4.14e-24!71;CL:0002057!1.18e-23!42;CL:0000839!4.52e-23!70;CL:0000860!8.18e-21!45;CL:0000115!3.76e-20!35;CL:0002139!7.04e-18!24;CL:0000071!1.01e-13!18;CL:0002546!1.01e-13!18;CL:0002078!5.81e-13!44;CL:0000213!2.32e-09!57;CL:0000215!2.32e-09!57;CL:0000738!1.78e-08!140;CL:0000037!2.31e-08!172;CL:0000566!2.31e-08!172;CL:0002032!3.03e-08!165;CL:0000837!3.03e-08!165;CL:1000413!4.72e-08!9;CL:0000988!1.26e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-27;33!CL:0002057;1.11e-27;33!CL:0000473;1.82e-27;39!CL:0000234;1.82e-27;39!CL:0000115;1.03e-22;36!CL:0002139;5.04e-22;24!CL:0000576;2.70e-17;48!CL:0000071;8.27e-17;18!CL:0000766;7.91e-14;69!CL:0002078;2.74e-12;45!CL:1000413;1.09e-09;9!CL:0000763;1.52e-08;100!CL:0000213;3.30e-08;58!CL:0000215;3.30e-08;58!CL:0000094;5.25e-07;8!CL:0002544;6.97e-07;6!CL:0000235;7.68e-07;6!CL:0002138;9.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.31e-31,48;CL:0000234,4.31e-31,48;CL:0000766,6.41e-31,72;CL:0002194,4.02e-29,59;CL:0000576,4.02e-29,59;CL:0000040,4.02e-29,59;CL:0000559,4.02e-29,59;CL:0002009,1.49e-27,61;CL:0000115,2.35e-26,36;CL:0000860,8.77e-26,42;CL:0002057,8.77e-26,42;CL:0000839,4.50e-24,66;CL:0000557,1.92e-23,67;CL:0000763,9.66e-23,108;CL:0000049,9.66e-23,108;CL:0002139,5.53e-22,24;CL:0002078,2.25e-18,45;CL:0000071,8.95e-17,18;CL:0002546,8.95e-17,18;CL:0000213,4.00e-13,58;CL:0000215,4.00e-13,58;CL:1000413,1.10e-09,9;CL:0000738,1.77e-09,136;CL:0002032,1.77e-08,161;CL:0000837,1.77e-08,161;CL:0000037,3.33e-08,168;CL:0002087,4.71e-08,115;CL:0000094,4.49e-07,8;CL:0000988,6.43e-07,177;CL:0002544,6.96e-07,6;CL:0000235,7.55e-07,6;CL:0005020,9.25e-07,6;CL:0002138,9.25e-07,6;CL:0005022,9.25e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-19;42!CL:0002546;8.27e-17;18!CL:0000049;1.18e-07;108!CL:0005022;9.13e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.49e-30!115;UBERON:0002371!7.32e-20!80;UBERON:0002405!1.85e-19!115;UBERON:0002193!3.87e-19!112;UBERON:0003081!2.95e-18!216;UBERON:0001474!8.38e-17!86;UBERON:0002390!2.13e-15!102;UBERON:0003061!2.13e-15!102;UBERON:0001049!1.02e-14!57;UBERON:0005068!1.02e-14!57;UBERON:0006241!1.02e-14!57;UBERON:0007135!1.02e-14!57;UBERON:0002616!1.86e-14!59;UBERON:0001986!1.01e-13!18;UBERON:0004638!1.01e-13!18;UBERON:0004852!1.01e-13!18;UBERON:0000955!4.52e-13!69;UBERON:0006238!4.52e-13!69;UBERON:0003080!8.90e-13!42;UBERON:0002780!3.21e-12!41;UBERON:0001890!3.21e-12!41;UBERON:0006240!3.21e-12!41;UBERON:0001017!4.87e-12!82;UBERON:0002020!1.17e-11!34;UBERON:0003528!1.17e-11!34;UBERON:0004765!1.48e-11!101;UBERON:0001434!1.48e-11!101;UBERON:0000025!2.95e-11!194;UBERON:0005743!3.01e-11!86;UBERON:0001893!5.03e-11!34;UBERON:0002791!6.50e-11!33;UBERON:0001869!2.75e-10!32;UBERON:0000487!9.94e-10!22;UBERON:0004111!1.13e-09!241;UBERON:0000073!4.92e-09!94;UBERON:0001016!4.92e-09!94;UBERON:0000467!1.21e-08!625;UBERON:0003075!1.30e-08!86;UBERON:0007284!1.30e-08!86;UBERON:0000480!1.61e-08!626;UBERON:0002619!3.17e-08!22;UBERON:0003915!4.72e-08!9;UBERON:0004700!4.72e-08!9;UBERON:0001917!4.72e-08!9;UBERON:0000055!5.89e-08!69;UBERON:0000477!5.96e-08!286;UBERON:0006914!1.17e-07!25;UBERON:0000956!1.26e-07!25;UBERON:0000203!1.26e-07!25;UBERON:0002346!1.55e-07!90;UBERON:0001950!2.34e-07!20;UBERON:0002049!3.39e-07!79;UBERON:0007798!3.39e-07!79;UBERON:0001009!5.41e-07!113;UBERON:0000468!7.12e-07!659;UBERON:0002204!9.10e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.27e-17;18!UBERON:0001986;8.27e-17;18!UBERON:0004852;8.27e-17;18!UBERON:0000487;1.75e-12;22!UBERON:0006914;3.40e-10;25!UBERON:0003915;1.09e-09;9!UBERON:0004700;1.09e-09;9!UBERON:0001917;1.09e-09;9!UBERON:0000125;5.99e-07;9!UBERON:0002308;5.99e-07;9!UBERON:0002420;8.03e-07;9!UBERON:0007245;8.03e-07;9!UBERON:0010009;8.03e-07;9!UBERON:0010011;8.03e-07;9!UBERON:0000454;8.03e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.22e-25,114;UBERON:0002405,3.39e-22,93;UBERON:0003081,2.71e-19,203;UBERON:0002371,1.42e-18,76;UBERON:0002193,9.67e-18,108;UBERON:0004638,8.95e-17,18;UBERON:0001986,8.95e-17,18;UBERON:0004852,8.95e-17,18;UBERON:0001474,5.66e-16,82;UBERON:0002390,5.87e-14,98;UBERON:0003061,5.87e-14,98;UBERON:0004765,4.10e-13,90;UBERON:0000487,1.86e-12,22;UBERON:0001434,2.79e-10,100;UBERON:0006914,3.58e-10,25;UBERON:0001049,4.88e-10,56;UBERON:0005068,4.88e-10,56;UBERON:0006241,4.88e-10,56;UBERON:0007135,4.88e-10,56;UBERON:0003915,1.10e-09,9;UBERON:0004700,1.10e-09,9;UBERON:0001917,1.10e-09,9;UBERON:0000073,1.96e-09,53;UBERON:0002616,1.96e-09,53;UBERON:0000025,2.42e-09,192;UBERON:0000926,1.84e-08,315;UBERON:0004120,1.84e-08,315;UBERON:0006603,1.84e-08,315;UBERON:0000955,2.80e-08,68;UBERON:0006238,2.80e-08,68;UBERON:0004111,4.99e-08,240;UBERON:0000055,6.13e-08,68;UBERON:0001017,1.37e-07,81;UBERON:0003528,1.50e-07,34;UBERON:0002020,1.50e-07,34;UBERON:0000923,4.26e-07,560;UBERON:0010316,4.26e-07,560;UBERON:0005291,4.26e-07,560;UBERON:0006598,4.26e-07,560;UBERON:0010317,4.26e-07,560;UBERON:0002532,4.26e-07,560;UBERON:0002780,4.58e-07,41;UBERON:0001890,4.58e-07,41;UBERON:0003080,4.58e-07,41;UBERON:0006240,4.58e-07,41;UBERON:0002050,5.17e-07,564;UBERON:0000125,7.08e-07,9;UBERON:0002308,7.08e-07,9;UBERON:0002420,8.36e-07,9;UBERON:0007245,8.36e-07,9;UBERON:0010009,8.36e-07,9;UBERON:0010011,8.36e-07,9;UBERON:0000454,8.36e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,7.47392126012918,8.44424675813868,15.1719800849754,0,0,0,0,0,0.293600439334847,13.2958898047651,22.0598892217156,16.2758153036889,56.202784034221,55.3858168892455,54.8635959060817,318.131346449688,332.908706389841,280.427174733116,362.589297572868,409.523216469738,327.979046777915,510.653996371817,464.16320023073,269.826224302876,269.935868016772,293.050046347057,250.539000199532,368.766743163963,387.253826932083,242.701363200691,452.391992924194,451.547141096064,354.832104818468,364.485686706321,384.565931894506,282.160784852644,329.097276604814,407.382591328238,326.358858473681,441.946402186611,378.075115854646,271.920433570806,154.982272674142,284.678612618387,200.637153637521,0.845021145247767,0.637812899895131,0.419317291016752,1.57260083605093,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0891541336676,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,2.55725123687061,0,0,0,0,0,0,0,0.087834785693126,3.99486180268024,0,0,0.97364218096405,1.0447784237956,1.19662164466979,0.715471872916026,0,0,39.9512438807077,36.9900875895634,54.5010587523923,10.1755429546322,67.1199097935849,86.9373012530613,49.1138171361505,34.3694289695207,36.6439250567311,39.8317529189958,37.4631264911507,17.4862584315258,26.3587022152023,37.8692972756245,79.3939108924124,9.37647146982838,6.28682243353275,9.00891843866578,21.4643292452237,26.5794384679076,25.0986389184658,32.9451043590158,7.75560528296651,0,0,0,0,0,0.709336764396714,0,2.1349799145941,0,0.311211035399766,5.92726957106628,4.41347138406339,0.302714855289863,0.576175924479999,0,0,3.4228309292667,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,1.13432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,34.6933063673585,7.01208869017229,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,27.5739915223651,25.4642031917136,20.357194289102,0,0,28.3149557000507,11.9342175221011,19.0247887729572,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,1.71072446022705,0,0.300343057843917,0,2.69114602428866,0.43596006883328,1.1734125731352,0,10.7296933755565,5.917119267892,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,3.25736184293735,0.355391948742546,0,0,0,0.099972991182057,55.9469390949476,59.2663367889909,69.5752000294004,0,0,0,0.144781306667579,0,0,0,0,0,0.77005821767849,0.254094624222463,0,0,3.18280904135263,0,6.74106321552464,2.99161459204025,9.11714129559278,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.391602314925481,0,0.82707210449155,3.23571301227925,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,70.5146981239559,49.4972682354661,11.8753753856177,95.6208966679794,0.270946437543853,0,0,0,0,0,0,0,0,0,8.03719890852234,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.616067160352178,0,0,0,0,0.744316738719335,0,2.66882271493355,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,1.94970791705028,1.05650146756755,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,8.00222306602623,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,16.2779564612512,5.92686031626872,0.324621940274555,7.86232098717685,0,1.41011906195721,5.01268954180134,0.677167111206413,0.963528450622197,0.80719882876419,1.27753871307098,4.46556948182494,0.921722292925374,0.894704431569664,0.834245708559542,1.36771666781428,0,0,0,0,0,0,14.5043097479175,0,0,0,0.23874448473769,0,0,6.95903353436409,5.90811548924153,0.667852230137435,0,0,3.18796781201712,3.86797481743607,0,0,0,0,0.269605053441981,0,10.2314474045374,6.70775158331149,0,0,1.93866549219044,5.10224539890182,3.99227596002388,0,0,12.3249927823915,0,0,0,0,0,0,7.97167247232455,5.90922549264499,1.52581736317083,2.32216445855572,1.18219047581419,0.658156191461918,0,0,2.6932590476329,0,0,0,0,2.87101043758728,1.83195186803725,5.86338253620498,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,6.96683351754953,4.15750553165694,1.83309043480088,0,0,0,1.48282492557489,3.21031058919516,0.468528891450678,0,0,0,0.789168805698781,3.62972148145992,0.30607276163049,7.39282981653309,0,0,0,0,0,0,0,0,0,0,0,3.14508002835654,0.687944129886466,0,0,0,2.61870344518732,0,1.35588444468319,0.411125773940253,1.19228767021794,0.569797163602908,0,0.240476460754601,2.56143593687223,0,0,0,0,0,0.248505071130865,0,1.35904206073614,1.255234155748,0,0,7.80546375322726,8.21432273351958,0,0,0,4.74780082162832,2.97908551215189,29.4327940076494,7.18844401796368,7.72606886645828,12.0512587018611,5.3746777989381,0,0,0,0,0,0,0,5.56660782866512,4.90332262001672,0,0,0,0.899895566206002,0.77380195455795,0.728994679896296,0,3.78267395036151,2.0981835253999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| ||
|short_description=p1@SEMA6B | |||
}} | }} |
Latest revision as of 15:59, 18 September 2015
Short description: | p1@SEMA6B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA6B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
EntrezGene: | SEMA6B |
HGNC: | 10739 |
UniProt: | Q9H3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data