FFCP PHASE1:Hg19::chr8:22423479..22423528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10174 | |EntrezGene=10174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |HGNC=30907 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIA0 | |UniProt=E5RIA0 | ||
|association_with_transcript=0bp_to_ENST00000522721_5end | |association_with_transcript=0bp_to_ENST00000522721_5end | ||
|cluster_id=chr8:22423479..22423528,+ | |||
|coexpression_cluster_id=C1220 | |coexpression_cluster_id=C1220 | ||
|description=CAGE_peak_2_at_SORBS3_5end | |description=CAGE_peak_2_at_SORBS3_5end | ||
|id=chr8:22423479..22423528,+ | |id=chr8:22423479..22423528,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.16e-35!180;CL:0000222!4.39e-27!119;CL:0000220!1.39e-24!246;CL:0002321!5.22e-24!248;CL:0000183!8.44e-20!59;CL:0000057!3.28e-19!75;CL:0000680!8.32e-19!57;CL:0000056!8.32e-19!57;CL:0000355!8.32e-19!57;CL:0000187!2.24e-18!54;CL:0002371!3.25e-17!591;CL:0000192!9.27e-17!42;CL:0000514!9.27e-17!42;CL:0000144!3.82e-16!625;CL:0000393!5.09e-15!60;CL:0000211!5.09e-15!60;CL:0000548!2.59e-14!679;CL:0000004!2.59e-14!679;CL:0000255!2.59e-14!679;CL:0000012!1.86e-13!682;CL:0000359!4.47e-13!32;CL:0002078!2.71e-09!44;CL:0000115!1.04e-08!35;CL:0000213!3.13e-08!57;CL:0000215!3.13e-08!57;CL:0002494!8.03e-08!16;CL:0002139!1.03e-07!24;CL:0000071!1.66e-07!18;CL:0002546!1.66e-07!18;CL:0002620!3.99e-07!23;CL:1000449!7.44e-07!16 | |ontology_enrichment_celltype=CL:0000055!6.16e-35!180;CL:0000222!4.39e-27!119;CL:0000220!1.39e-24!246;CL:0002321!5.22e-24!248;CL:0000183!8.44e-20!59;CL:0000057!3.28e-19!75;CL:0000680!8.32e-19!57;CL:0000056!8.32e-19!57;CL:0000355!8.32e-19!57;CL:0000187!2.24e-18!54;CL:0002371!3.25e-17!591;CL:0000192!9.27e-17!42;CL:0000514!9.27e-17!42;CL:0000144!3.82e-16!625;CL:0000393!5.09e-15!60;CL:0000211!5.09e-15!60;CL:0000548!2.59e-14!679;CL:0000004!2.59e-14!679;CL:0000255!2.59e-14!679;CL:0000012!1.86e-13!682;CL:0000359!4.47e-13!32;CL:0002078!2.71e-09!44;CL:0000115!1.04e-08!35;CL:0000213!3.13e-08!57;CL:0000215!3.13e-08!57;CL:0002494!8.03e-08!16;CL:0002139!1.03e-07!24;CL:0000071!1.66e-07!18;CL:0002546!1.66e-07!18;CL:0002620!3.99e-07!23;CL:1000449!7.44e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.10e-13;43!CL:0000359;1.47e-12;32!CL:0000187;1.06e-10;55!CL:0000057;9.62e-09;73!CL:0000393;2.12e-08;61!CL:0000211;2.12e-08;61!CL:0000115;3.26e-08;36!CL:0002494;5.51e-08;16!CL:0000134;6.50e-08;55!CL:0002139;7.60e-08;24!CL:0000071;1.13e-07;18!CL:0002620;3.48e-07;23!CL:0000723;4.13e-07;61!CL:0002320;5.63e-07;188!CL:0000048;7.57e-07;58!CL:0002078;8.39e-07;45!CL:1000449;8.54e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.54e-28,121;CL:0002321,6.07e-25,250;CL:0000057,3.96e-20,76;CL:0000680,1.91e-19,58;CL:0000056,1.91e-19,58;CL:0000355,1.91e-19,58;CL:0000187,5.30e-19,55;CL:0000192,2.48e-17,43;CL:0000514,2.48e-17,43;CL:0000393,1.69e-15,61;CL:0000211,1.69e-15,61;CL:0000359,2.40e-13,32;CL:0002078,5.62e-10,45;CL:0000115,1.28e-09,36;CL:0000213,7.88e-09,58;CL:0000215,7.88e-09,58;CL:0002494,5.72e-08,16;CL:0002139,7.41e-08,24;CL:0000071,1.21e-07,18;CL:0002546,1.21e-07,18;CL:0002620,2.95e-07,23;CL:1000449,8.98e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;8.10e-13;43!CL:0000355;1.52e-10;58!CL:0000222;1.62e-08;121!CL:0002546;1.13e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.90e-24!84;UBERON:0002049!2.59e-22!79;UBERON:0007798!2.59e-22!79;UBERON:0003914!3.10e-22!118;UBERON:0000914!3.12e-22!83;UBERON:0002329!3.12e-22!83;UBERON:0003077!3.12e-22!83;UBERON:0003059!3.12e-22!83;UBERON:0007282!3.12e-22!83;UBERON:0009618!3.12e-22!83;UBERON:0007285!3.12e-22!83;UBERON:0005256!1.88e-21!143;UBERON:0000486!7.82e-21!82;UBERON:0000055!3.19e-20!69;UBERON:0004290!5.76e-20!70;UBERON:0001981!1.20e-19!60;UBERON:0007500!1.20e-19!60;UBERON:0004537!1.20e-19!60;UBERON:0006965!1.20e-19!60;UBERON:0002100!4.79e-19!216;UBERON:0000490!1.84e-17!138;UBERON:0001134!2.60e-17!61;UBERON:0002036!2.60e-17!61;UBERON:0003082!2.60e-17!61;UBERON:0001637!4.24e-17!42;UBERON:0003509!4.24e-17!42;UBERON:0004572!4.24e-17!42;UBERON:0000475!4.71e-17!365;UBERON:0004535!1.09e-16!110;UBERON:0000119!1.12e-16!312;UBERON:0002385!1.65e-16!63;UBERON:0001015!1.65e-16!63;UBERON:0000383!1.65e-16!63;UBERON:0000483!1.85e-16!309;UBERON:0001009!2.12e-16!113;UBERON:0003104!2.30e-15!238;UBERON:0009142!2.30e-15!238;UBERON:0000481!3.41e-14!347;UBERON:0000468!4.30e-13!659;UBERON:0004573!5.19e-13!33;UBERON:0004571!5.19e-13!33;UBERON:0003102!5.72e-12!95;UBERON:0000467!1.36e-11!625;UBERON:0000480!2.72e-11!626;UBERON:0000477!1.25e-10!286;UBERON:0004111!9.23e-10!241;UBERON:0000926!1.03e-09!448;UBERON:0004120!1.03e-09!448;UBERON:0006603!1.03e-09!448;UBERON:0003103!2.51e-09!69;UBERON:0002199!1.44e-08!45;UBERON:0002416!1.44e-08!45;UBERON:0000947!1.37e-07!21;UBERON:0010191!1.37e-07!21;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0001986!1.66e-07!18;UBERON:0004638!1.66e-07!18;UBERON:0004852!1.66e-07!18;UBERON:0000923!1.98e-07!604;UBERON:0005291!1.98e-07!604;UBERON:0006598!1.98e-07!604;UBERON:0002532!1.98e-07!604;UBERON:0000487!2.13e-07!22;UBERON:0000025!2.22e-07!194;UBERON:0006914!3.05e-07!25;UBERON:0000922!3.56e-07!612;UBERON:0002097!3.60e-07!40;UBERON:0004211!7.44e-07!16;UBERON:0001285!7.44e-07!16;UBERON:0007684!7.44e-07!16;UBERON:0003220!7.44e-07!16;UBERON:0004208!7.44e-07!16 | |ontology_enrichment_uberon=UBERON:0004872!3.90e-24!84;UBERON:0002049!2.59e-22!79;UBERON:0007798!2.59e-22!79;UBERON:0003914!3.10e-22!118;UBERON:0000914!3.12e-22!83;UBERON:0002329!3.12e-22!83;UBERON:0003077!3.12e-22!83;UBERON:0003059!3.12e-22!83;UBERON:0007282!3.12e-22!83;UBERON:0009618!3.12e-22!83;UBERON:0007285!3.12e-22!83;UBERON:0005256!1.88e-21!143;UBERON:0000486!7.82e-21!82;UBERON:0000055!3.19e-20!69;UBERON:0004290!5.76e-20!70;UBERON:0001981!1.20e-19!60;UBERON:0007500!1.20e-19!60;UBERON:0004537!1.20e-19!60;UBERON:0006965!1.20e-19!60;UBERON:0002100!4.79e-19!216;UBERON:0000490!1.84e-17!138;UBERON:0001134!2.60e-17!61;UBERON:0002036!2.60e-17!61;UBERON:0003082!2.60e-17!61;UBERON:0001637!4.24e-17!42;UBERON:0003509!4.24e-17!42;UBERON:0004572!4.24e-17!42;UBERON:0000475!4.71e-17!365;UBERON:0004535!1.09e-16!110;UBERON:0000119!1.12e-16!312;UBERON:0002385!1.65e-16!63;UBERON:0001015!1.65e-16!63;UBERON:0000383!1.65e-16!63;UBERON:0000483!1.85e-16!309;UBERON:0001009!2.12e-16!113;UBERON:0003104!2.30e-15!238;UBERON:0009142!2.30e-15!238;UBERON:0000481!3.41e-14!347;UBERON:0000468!4.30e-13!659;UBERON:0004573!5.19e-13!33;UBERON:0004571!5.19e-13!33;UBERON:0003102!5.72e-12!95;UBERON:0000467!1.36e-11!625;UBERON:0000480!2.72e-11!626;UBERON:0000477!1.25e-10!286;UBERON:0004111!9.23e-10!241;UBERON:0000926!1.03e-09!448;UBERON:0004120!1.03e-09!448;UBERON:0006603!1.03e-09!448;UBERON:0003103!2.51e-09!69;UBERON:0002199!1.44e-08!45;UBERON:0002416!1.44e-08!45;UBERON:0000947!1.37e-07!21;UBERON:0010191!1.37e-07!21;UBERON:0002050!1.51e-07!605;UBERON:0005423!1.51e-07!605;UBERON:0001986!1.66e-07!18;UBERON:0004638!1.66e-07!18;UBERON:0004852!1.66e-07!18;UBERON:0000923!1.98e-07!604;UBERON:0005291!1.98e-07!604;UBERON:0006598!1.98e-07!604;UBERON:0002532!1.98e-07!604;UBERON:0000487!2.13e-07!22;UBERON:0000025!2.22e-07!194;UBERON:0006914!3.05e-07!25;UBERON:0000922!3.56e-07!612;UBERON:0002097!3.60e-07!40;UBERON:0004211!7.44e-07!16;UBERON:0001285!7.44e-07!16;UBERON:0007684!7.44e-07!16;UBERON:0003220!7.44e-07!16;UBERON:0004208!7.44e-07!16 | ||
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| ||
|short_description=p2@SORBS3 | |short_description=p2@SORBS3 | ||
}} | }} |
Latest revision as of 11:38, 17 September 2015
Short description: | p2@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SORBS3_5end |
Coexpression cluster: | C1220_Mesenchymal_Fibroblast_Renal_Alveolar_Trabecular_Smooth_Hepatic |
Association with transcript: | 0bp_to_ENST00000522721_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | E5RIA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.54e-28 | 121 |
embryonic cell | 6.07e-25 | 250 |
fibroblast | 3.96e-20 | 76 |
muscle precursor cell | 1.91e-19 | 58 |
myoblast | 1.91e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-19 | 58 |
muscle cell | 5.30e-19 | 55 |
smooth muscle cell | 2.48e-17 | 43 |
smooth muscle myoblast | 2.48e-17 | 43 |
electrically responsive cell | 1.69e-15 | 61 |
electrically active cell | 1.69e-15 | 61 |
vascular associated smooth muscle cell | 2.40e-13 | 32 |
meso-epithelial cell | 5.62e-10 | 45 |
endothelial cell | 1.28e-09 | 36 |
lining cell | 7.88e-09 | 58 |
barrier cell | 7.88e-09 | 58 |
cardiocyte | 5.72e-08 | 16 |
endothelial cell of vascular tree | 7.41e-08 | 24 |
blood vessel endothelial cell | 1.21e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-07 | 18 |
skin fibroblast | 2.95e-07 | 23 |
epithelial cell of nephron | 8.98e-07 | 15 |