FFCP PHASE1:Hg19::chr19:47617013..47617069,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:47617013..47617069,-
|short_description=p2@ZC3H4
|description=CAGE_peak_2_at_ZC3H4_5end
|association_with_transcript=-4bp_to_ENST00000253048,NM_015168,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23211 | |EntrezGene=23211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17808 | |HGNC=17808 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPT8 | |UniProt=Q9UPT8 | ||
|association_with_transcript=-4bp_to_ENST00000253048,NM_015168,uc002pga.3_5end | |||
|cluster_id=chr19:47617013..47617069,- | |||
|description=CAGE_peak_2_at_ZC3H4_5end | |||
|id=chr19:47617013..47617069,- | |||
|ontology_enrichment_celltype=CL:0002057!4.42e-15!42;CL:0000860!3.59e-13!45;CL:0000763!9.05e-13!112;CL:0000049!9.05e-13!112;CL:0000766!6.28e-12!76;CL:0000839!1.35e-10!70;CL:0000557!7.94e-10!71;CL:0002032!1.31e-09!165;CL:0000837!1.31e-09!165;CL:0000988!1.43e-08!182;CL:0002009!1.59e-08!65;CL:0000037!3.24e-08!172;CL:0000566!3.24e-08!172;CL:0002194!4.55e-08!63;CL:0000576!4.55e-08!63;CL:0000040!4.55e-08!63;CL:0000559!4.55e-08!63;CL:0002031!2.97e-07!124;CL:0000738!7.35e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-17;33!CL:0002057;1.92e-17;33!CL:0000473;1.91e-11;39!CL:0000234;1.91e-11;39!CL:0000576;5.34e-10;48!CL:0000766;7.39e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.42e-15,42;CL:0002057,4.42e-15,42;CL:0000763,5.46e-14,108;CL:0000049,5.46e-14,108;CL:0000766,1.94e-13,72;CL:0000473,4.27e-12,48;CL:0000234,4.27e-12,48;CL:0000839,4.64e-12,66;CL:0000557,3.30e-11,67;CL:0002032,2.17e-10,161;CL:0000837,2.17e-10,161;CL:0002009,7.79e-10,61;CL:0000988,1.72e-09,177;CL:0002194,2.37e-09,59;CL:0000576,2.37e-09,59;CL:0000040,2.37e-09,59;CL:0000559,2.37e-09,59;CL:0000037,6.67e-09,168;CL:0002031,5.24e-08,120;CL:0000738,1.55e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.84e-11!102;UBERON:0003061!8.84e-11!102;UBERON:0002193!6.07e-10!112;UBERON:0002371!8.14e-08!80;UBERON:0007023!8.29e-08!115;UBERON:0002405!3.08e-07!115;UBERON:0001474!6.01e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.44e-12,98;UBERON:0003061,6.44e-12,98;UBERON:0002193,5.96e-11,108;UBERON:0002405,2.82e-09,93;UBERON:0002371,7.14e-09,76;UBERON:0001474,7.21e-08,82;UBERON:0007023,1.31e-07,114;UBERON:0004765,9.23e-07,90 | |||
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| ||
|short_description=p2@ZC3H4 | |||
}} | }} |
Latest revision as of 22:40, 18 September 2015
Short description: | p2@ZC3H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZC3H4_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000253048, NM_015168, uc002pga.3_5end |
EntrezGene: | ZC3H4 |
HGNC: | 17808 |
UniProt: | Q9UPT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.42e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.42e-15 | 42 |
myeloid cell | 5.46e-14 | 108 |
common myeloid progenitor | 5.46e-14 | 108 |
myeloid leukocyte | 1.94e-13 | 72 |
defensive cell | 4.27e-12 | 48 |
phagocyte | 4.27e-12 | 48 |
myeloid lineage restricted progenitor cell | 4.64e-12 | 66 |
granulocyte monocyte progenitor cell | 3.30e-11 | 67 |
hematopoietic oligopotent progenitor cell | 2.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-10 | 161 |
macrophage dendritic cell progenitor | 7.79e-10 | 61 |
hematopoietic cell | 1.72e-09 | 177 |
monopoietic cell | 2.37e-09 | 59 |
monocyte | 2.37e-09 | 59 |
monoblast | 2.37e-09 | 59 |
promonocyte | 2.37e-09 | 59 |
hematopoietic stem cell | 6.67e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 5.24e-08 | 120 |
leukocyte | 1.55e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.44e-12 | 98 |
blood island | 6.44e-12 | 98 |
hemolymphoid system | 5.96e-11 | 108 |
immune system | 2.82e-09 | 93 |
bone marrow | 7.14e-09 | 76 |
bone element | 7.21e-08 | 82 |
adult organism | 1.31e-07 | 114 |
skeletal element | 9.23e-07 | 90 |