FFCP PHASE1:Hg19::chr9:123165695..123165711,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55755 | |EntrezGene=55755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18672 | |HGNC=18672 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000433194_5end | |association_with_transcript=18bp_to_ENST00000433194_5end | ||
|cluster_id=chr9:123165695..123165711,- | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_11_at_CDK5RAP2_5end | |description=CAGE_peak_11_at_CDK5RAP2_5end | ||
|id=chr9:123165695..123165711,- | |id=chr9:123165695..123165711,- | ||
|ontology_enrichment_celltype=CL:0002194!4.34e-12!63;CL:0000576!4.34e-12!63;CL:0000040!4.34e-12!63;CL:0000559!4.34e-12!63;CL:0002057!7.67e-12!42;CL:0002009!2.18e-11!65;CL:0000766!8.57e-11!76;CL:0000860!1.73e-10!45;CL:0000839!7.87e-10!70;CL:0000557!1.51e-09!71 | |ontology_enrichment_celltype=CL:0002194!4.34e-12!63;CL:0000576!4.34e-12!63;CL:0000040!4.34e-12!63;CL:0000559!4.34e-12!63;CL:0002057!7.67e-12!42;CL:0002009!2.18e-11!65;CL:0000766!8.57e-11!76;CL:0000860!1.73e-10!45;CL:0000839!7.87e-10!70;CL:0000557!1.51e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-22;33!CL:0002057;1.52e-22;33!CL:0000473;6.03e-17;39!CL:0000234;6.03e-17;39!CL:0000576;1.46e-14;48!CL:0000766;4.62e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-19,42;CL:0002057,2.88e-19,42;CL:0000473,1.14e-18,48;CL:0000234,1.14e-18,48;CL:0002194,5.11e-18,59;CL:0000576,5.11e-18,59;CL:0000040,5.11e-18,59;CL:0000559,5.11e-18,59;CL:0000766,9.27e-18,72;CL:0002009,2.75e-17,61;CL:0000839,1.19e-15,66;CL:0000557,2.36e-15,67;CL:0000763,3.17e-10,108;CL:0000049,3.17e-10,108;CL:0002087,3.19e-08,115;CL:0000738,4.03e-08,136;CL:0002031,1.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.47e-08!115;UBERON:0002390!2.82e-08!102;UBERON:0003061!2.82e-08!102;UBERON:0002371!2.21e-07!80;UBERON:0002193!3.71e-07!112 | |ontology_enrichment_uberon=UBERON:0002405!2.47e-08!115;UBERON:0002390!2.82e-08!102;UBERON:0003061!2.82e-08!102;UBERON:0002371!2.21e-07!80;UBERON:0002193!3.71e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.56e-16,98;UBERON:0003061,7.56e-16,98;UBERON:0002193,2.43e-15,108;UBERON:0002371,5.01e-13,76;UBERON:0002405,1.35e-12,93;UBERON:0001474,9.24e-12,82;UBERON:0004765,2.44e-10,90;UBERON:0001434,6.91e-09,100;UBERON:0003081,7.30e-07,203 | |||
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| ||
|short_description=p11@CDK5RAP2 | |short_description=p11@CDK5RAP2 | ||
}} | }} |
Latest revision as of 19:13, 24 September 2015
Short description: | p11@CDK5RAP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CDK5RAP2_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 18bp_to_ENST00000433194_5end |
EntrezGene: | CDK5RAP2 |
HGNC: | 18672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.88e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-19 | 42 |
defensive cell | 1.14e-18 | 48 |
phagocyte | 1.14e-18 | 48 |
monopoietic cell | 5.11e-18 | 59 |
monocyte | 5.11e-18 | 59 |
monoblast | 5.11e-18 | 59 |
promonocyte | 5.11e-18 | 59 |
myeloid leukocyte | 9.27e-18 | 72 |
macrophage dendritic cell progenitor | 2.75e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.19e-15 | 66 |
granulocyte monocyte progenitor cell | 2.36e-15 | 67 |
myeloid cell | 3.17e-10 | 108 |
common myeloid progenitor | 3.17e-10 | 108 |
nongranular leukocyte | 3.19e-08 | 115 |
leukocyte | 4.03e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.56e-16 | 98 |
blood island | 7.56e-16 | 98 |
hemolymphoid system | 2.43e-15 | 108 |
bone marrow | 5.01e-13 | 76 |
immune system | 1.35e-12 | 93 |
bone element | 9.24e-12 | 82 |
skeletal element | 2.44e-10 | 90 |
skeletal system | 6.91e-09 | 100 |
lateral plate mesoderm | 7.30e-07 | 203 |