FFCP PHASE1:Hg19::chr9:12701369..12701379,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7306 | |EntrezGene=7306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12450 | |HGNC=12450 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-265bp_to_ENST00000470909_5end | |association_with_transcript=-265bp_to_ENST00000470909_5end | ||
|cluster_id=chr9:12701369..12701379,+ | |||
|coexpression_cluster_id=C4798 | |coexpression_cluster_id=C4798 | ||
|description=CAGE_peak_29_at_TYRP1_5end | |description=CAGE_peak_29_at_TYRP1_5end | ||
|id=chr9:12701369..12701379,+ | |id=chr9:12701369..12701379,+ | ||
|ontology_enrichment_celltype=CL:0000148!4.09e-33!10;CL:0000541!4.09e-33!10;CL:0000147!1.98e-23!14;CL:0002504!4.65e-20!3;CL:1000279!4.65e-20!3;CL:1000280!4.65e-20!3;CL:0000710!3.74e-16!20;CL:0002195!3.22e-15!2;CL:0002571!3.22e-15!2;CL:0000075!9.62e-12!27;CL:0002567!3.04e-10!3;CL:0002077!1.89e-09!33;CL:0000333!4.78e-09!41;CL:0002566!2.19e-08!1;CL:0002568!3.11e-08!1;CL:0000325!7.33e-08!39 | |ontology_enrichment_celltype=CL:0000148!4.09e-33!10;CL:0000541!4.09e-33!10;CL:0000147!1.98e-23!14;CL:0002504!4.65e-20!3;CL:1000279!4.65e-20!3;CL:1000280!4.65e-20!3;CL:0000710!3.74e-16!20;CL:0002195!3.22e-15!2;CL:0002571!3.22e-15!2;CL:0000075!9.62e-12!27;CL:0002567!3.04e-10!3;CL:0002077!1.89e-09!33;CL:0000333!4.78e-09!41;CL:0002566!2.19e-08!1;CL:0002568!3.11e-08!1;CL:0000325!7.33e-08!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.39e-61;10!CL:0002195;1.14e-50;2!CL:0002571;1.14e-50;2!CL:0000147;5.48e-44;14!CL:0002567;1.77e-33;3!CL:0000710;6.05e-31;20!CL:0002566;5.22e-26;1!CL:0000075;4.91e-23;27!CL:0002077;1.22e-16;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.25e-61,10;CL:0000541,2.25e-61,10;CL:0002195,1.46e-50,2;CL:0002571,1.46e-50,2;CL:0000147,5.24e-44,14;CL:0002567,2.09e-33,3;CL:0000710,5.87e-31,20;CL:0002566,5.93e-26,1;CL:0000075,4.80e-23,27;CL:0002077,2.22e-18,34;CL:0000333,1.34e-14,41;CL:0000133,2.28e-10,59;CL:0000221,1.39e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000133;9.07e-07;59 | |||
|ontology_enrichment_disease=DOID:3371!2.90e-08!1;DOID:4549!2.90e-08!1;DOID:5861!2.90e-08!1;DOID:6496!2.90e-08!1;DOID:5662!5.40e-08!1 | |ontology_enrichment_disease=DOID:3371!2.90e-08!1;DOID:4549!2.90e-08!1;DOID:5861!2.90e-08!1;DOID:6496!2.90e-08!1;DOID:5662!5.40e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001155!4.93e-07!9 | |ontology_enrichment_uberon=UBERON:0001155!4.93e-07!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p29@TYRP1 | |short_description=p29@TYRP1 | ||
}} | }} |
Latest revision as of 23:55, 24 September 2015
Short description: | p29@TYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TYRP1_5end |
Coexpression cluster: | C4798_Melanocyte_mesothelioma_Mesenchymal_extraskeletal_melanoma_Smooth_retina |
Association with transcript: | -265bp_to_ENST00000470909_5end |
EntrezGene: | TYRP1 |
HGNC: | 12450 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.25e-61 | 10 |
melanoblast | 2.25e-61 | 10 |
hepatic stem cell | 1.46e-50 | 2 |
hepatic mesenchymal stem cell | 1.46e-50 | 2 |
pigment cell | 5.24e-44 | 14 |
light melanocyte | 2.09e-33 | 3 |
neurecto-epithelial cell | 5.87e-31 | 20 |
dark melanocyte | 5.93e-26 | 1 |
columnar/cuboidal epithelial cell | 4.80e-23 | 27 |
ecto-epithelial cell | 2.22e-18 | 34 |
migratory neural crest cell | 1.34e-14 | 41 |
neurectodermal cell | 2.28e-10 | 59 |
ectodermal cell | 1.39e-08 | 72 |