FFCP PHASE1:Hg19::chr9:91926103..91926119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1164 | |EntrezGene=1164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2000 | |HGNC=2000 | ||
|TSSclassifier=strong | |||
|UniProt=P33552,Q6FGI9 | |UniProt=P33552,Q6FGI9 | ||
|association_with_transcript=0bp_to_ENST00000314355,NM_001827,uc004aqh.2_5end | |association_with_transcript=0bp_to_ENST00000314355,NM_001827,uc004aqh.2_5end | ||
|cluster_id=chr9:91926103..91926119,+ | |||
|coexpression_cluster_id=C747 | |coexpression_cluster_id=C747 | ||
|description=CAGE_peak_1_at_CKS2_5end | |description=CAGE_peak_1_at_CKS2_5end | ||
|id=chr9:91926103..91926119,+ | |id=chr9:91926103..91926119,+ | ||
|ontology_enrichment_celltype=CL:0000012!5.38e-30!682;CL:0000548!1.22e-29!679;CL:0000004!1.22e-29!679;CL:0000255!1.22e-29!679;CL:0000066!3.25e-21!254;CL:0000003!4.86e-17!722;CL:0000063!1.11e-15!578;CL:0000144!8.73e-14!625;CL:0002321!1.54e-10!248;CL:0000220!6.54e-10!246;CL:0002371!6.76e-08!591 | |ontology_enrichment_celltype=CL:0000012!5.38e-30!682;CL:0000548!1.22e-29!679;CL:0000004!1.22e-29!679;CL:0000255!1.22e-29!679;CL:0000066!3.25e-21!254;CL:0000003!4.86e-17!722;CL:0000063!1.11e-15!578;CL:0000144!8.73e-14!625;CL:0002321!1.54e-10!248;CL:0000220!6.54e-10!246;CL:0002371!6.76e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.13e-07;17!CL:0002518;4.13e-07;17!CL:1000449;8.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-21,253;CL:0002321,1.33e-10,250;CL:1000497,4.17e-07,17;CL:0002518,4.17e-07,17;CL:1000449,8.67e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.29e-44!239;DOID:162!3.88e-43!235;DOID:0050687!1.27e-22!143;DOID:0050686!2.09e-19!137;DOID:305!3.58e-18!106;DOID:2531!1.77e-14!51;DOID:0060083!1.77e-14!51;DOID:1240!1.49e-10!39;DOID:8692!6.81e-07!31 | |ontology_enrichment_disease=DOID:14566!6.29e-44!239;DOID:162!3.88e-43!235;DOID:0050687!1.27e-22!143;DOID:0050686!2.09e-19!137;DOID:305!3.58e-18!106;DOID:2531!1.77e-14!51;DOID:0060083!1.77e-14!51;DOID:1240!1.49e-10!39;DOID:8692!6.81e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;4.51e-09;51!DOID:0060083;4.51e-09;51!DOID:1240;1.79e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.29e-44,239;DOID:162,3.88e-43,235;DOID:0050687,1.27e-22,143;DOID:0050686,2.09e-19,137;DOID:305,3.58e-18,106;DOID:2531,1.77e-14,51;DOID:0060083,1.77e-14,51;DOID:1240,1.49e-10,39;DOID:8692,6.81e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.58e-07;15!UBERON:0004819;8.58e-07;15!UBERON:0001285;8.58e-07;15!UBERON:0007684;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.67e-07,15;UBERON:0009773,8.67e-07,15;UBERON:0001231,8.67e-07,15;UBERON:0001285,8.67e-07,15;UBERON:0007684,8.67e-07,15;UBERON:0004208,8.67e-07,15 | |||
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| ||
|short_description=p1@CKS2 | |short_description=p1@CKS2 | ||
}} | }} |
Latest revision as of 04:38, 18 September 2015
Short description: | p1@CKS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CKS2_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000314355, NM_001827, uc004aqh.2_5end |
EntrezGene: | CKS2 |
HGNC: | 2000 |
UniProt: | P33552Q6FGI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-21 | 253 |
embryonic cell | 1.33e-10 | 250 |
kidney cell | 4.17e-07 | 17 |
kidney epithelial cell | 4.17e-07 | 17 |
epithelial cell of nephron | 8.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.67e-07 | 15 |
renal tubule | 8.67e-07 | 15 |
nephron tubule | 8.67e-07 | 15 |
nephron | 8.67e-07 | 15 |
uriniferous tubule | 8.67e-07 | 15 |
nephrogenic mesenchyme | 8.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.29e-44 | 239 |
cancer | 3.88e-43 | 235 |
cell type cancer | 1.27e-22 | 143 |
organ system cancer | 2.09e-19 | 137 |
carcinoma | 3.58e-18 | 106 |
hematologic cancer | 1.77e-14 | 51 |
immune system cancer | 1.77e-14 | 51 |
leukemia | 1.49e-10 | 39 |
myeloid leukemia | 6.81e-07 | 31 |