FFCP PHASE1:Hg19::chr19:49464515..49464524,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49464515..49464524,+
|short_description=p@chr19:49464515..49464524,+
|description=CAGE_peak_at_chr19:49464515..49464524,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49464515..49464524,+ | |||
|description=CAGE_peak_at_chr19:49464515..49464524,+ | |||
|id=chr19:49464515..49464524,+ | |||
|ontology_enrichment_celltype=CL:0000144!5.34e-14!625;CL:0000548!1.07e-12!679;CL:0000004!1.07e-12!679;CL:0000255!1.07e-12!679;CL:0002371!1.32e-12!591;CL:0000012!1.91e-12!682;CL:0000003!1.72e-11!722;CL:0000220!4.64e-09!246;CL:0002321!8.06e-09!248;CL:0000222!6.22e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:1000746;1.33e-09;7!CL:1000612;1.33e-09;7!CL:0002681;4.04e-09;12!CL:0002584;4.04e-09;12!CL:1000449;1.00e-08;15!CL:1000497;1.80e-07;17!CL:0002518;1.80e-07;17!CL:0002188;7.49e-07;5!CL:0002144;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,1.94e-09,7;CL:1000612,1.94e-09,7;CL:0002681,3.26e-09,12;CL:0002584,3.26e-09,12;CL:1000449,7.42e-09,15;CL:0000222,2.02e-08,121;CL:0002321,2.72e-08,250;CL:0002078,4.41e-08,45;CL:1000497,1.39e-07,17;CL:0002518,1.39e-07,17;CL:0000115,4.06e-07,36;CL:0002144,5.62e-07,3;CL:0002188,8.37e-07,5;CL:0002328,8.95e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.33e-09;7!UBERON:0001229;1.33e-09;7!UBERON:0001225;4.04e-09;12!UBERON:0008987;4.04e-09;12!UBERON:0001851;1.00e-08;15!UBERON:0006555;1.00e-08;15!UBERON:0004819;1.00e-08;15!UBERON:0001285;1.00e-08;15!UBERON:0007684;1.00e-08;15!UBERON:0000353;5.68e-07;15!UBERON:0010523;8.62e-07;3!UBERON:0001915;8.62e-07;3!UBERON:0001982;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.94e-09,7;UBERON:0000074,1.94e-09,7;UBERON:0001229,1.94e-09,7;UBERON:0001230,1.94e-09,7;UBERON:0003220,1.94e-09,7;UBERON:0005749,1.94e-09,7;UBERON:0004199,1.94e-09,7;UBERON:0004209,1.94e-09,7;UBERON:0004198,1.94e-09,7;UBERON:0001225,3.26e-09,12;UBERON:0008987,3.26e-09,12;UBERON:0001851,6.05e-09,15;UBERON:0004211,7.42e-09,15;UBERON:0009773,7.42e-09,15;UBERON:0001231,7.42e-09,15;UBERON:0001285,7.42e-09,15;UBERON:0007684,7.42e-09,15;UBERON:0004208,7.42e-09,15;UBERON:0006555,3.53e-08,16;UBERON:0004819,3.53e-08,16;UBERON:0005103,3.81e-08,8;UBERON:0000083,3.81e-08,8;UBERON:0009201,3.81e-08,8;UBERON:0006553,3.81e-08,8;UBERON:0003074,3.81e-08,8;UBERON:0003060,3.81e-08,8;UBERON:0007503,5.20e-08,78;UBERON:0006554,2.33e-07,47;UBERON:0000080,3.85e-07,9;UBERON:0002120,3.85e-07,9;UBERON:0004875,3.85e-07,9;UBERON:0005721,3.85e-07,9;UBERON:0005754,3.85e-07,9;UBERON:0007297,3.85e-07,9;UBERON:0001008,4.06e-07,48;UBERON:0000353,4.81e-07,15;UBERON:0010523,5.62e-07,3;UBERON:0001915,5.62e-07,3;UBERON:0001982,5.62e-07,3;UBERON:0004815,8.95e-07,3;UBERON:0002031,8.95e-07,3 | |||
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| ||
|short_description=p@chr19:49464515..49464524,+ | |||
}} | }} |
Latest revision as of 15:56, 27 July 2015
Short description: | p@chr19:49464515..49464524, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49464515..49464524, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.94e-09 | 7 |
kidney corpuscule cell | 1.94e-09 | 7 |
kidney cortical cell | 3.26e-09 | 12 |
renal cortical epithelial cell | 3.26e-09 | 12 |
epithelial cell of nephron | 7.42e-09 | 15 |
mesodermal cell | 2.02e-08 | 121 |
embryonic cell | 2.72e-08 | 250 |
meso-epithelial cell | 4.41e-08 | 45 |
kidney cell | 1.39e-07 | 17 |
kidney epithelial cell | 1.39e-07 | 17 |
endothelial cell | 4.06e-07 | 36 |
capillary endothelial cell | 5.62e-07 | 3 |
glomerular endothelial cell | 8.37e-07 | 5 |
bronchial epithelial cell | 8.95e-07 | 3 |