FFCP PHASE1:Hg19::chrX:110507037..110507057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=827 | |EntrezGene=827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1483 | |HGNC=1483 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWQ6 | |UniProt=F5GWQ6 | ||
|association_with_transcript=46bp_to_ENST00000541758_5end | |association_with_transcript=46bp_to_ENST00000541758_5end | ||
|cluster_id=chrX:110507037..110507057,- | |||
|coexpression_cluster_id=C533 | |coexpression_cluster_id=C533 | ||
|description=CAGE_peak_4_at_CAPN6_5end | |description=CAGE_peak_4_at_CAPN6_5end | ||
|id=chrX:110507037..110507057,- | |id=chrX:110507037..110507057,- | ||
|ontology_enrichment_celltype=CL:0002541!3.11e-21!3;CL:0000039!5.08e-15!7;CL:0000586!5.08e-15!7;CL:0002537!1.20e-12!5;CL:0000349!8.52e-10!3;CL:0002577!8.52e-10!3 | |ontology_enrichment_celltype=CL:0002541!3.11e-21!3;CL:0000039!5.08e-15!7;CL:0000586!5.08e-15!7;CL:0002537!1.20e-12!5;CL:0000349!8.52e-10!3;CL:0002577!8.52e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;8.99e-44;19!CL:0002541;4.42e-41;3!CL:0002537;2.47e-24;5!CL:0002577;2.32e-18;3!CL:0000039;1.37e-08;7!CL:0000586;1.37e-08;7!CL:0002097;8.60e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.99e-44,19;CL:0002541,4.42e-41,3;CL:0002537,2.47e-24,5;CL:0002577,2.32e-18,3;CL:0000039,1.37e-08,7;CL:0000586,1.37e-08,7;CL:0002097,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.07e-14;1 | |||
|ontology_enrichment_disease=DOID:3095!6.29e-10!22;DOID:2994!6.29e-10!22;DOID:1799!2.89e-08!1;DOID:10165!2.89e-08!1;DOID:1798!2.89e-08!1 | |ontology_enrichment_disease=DOID:3095!6.29e-10!22;DOID:2994!6.29e-10!22;DOID:1799!2.89e-08!1;DOID:10165!2.89e-08!1;DOID:1798!2.89e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.42e-15;1!DOID:10165;5.42e-15;1!DOID:1798;5.42e-15;1!DOID:170;8.11e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.42e-15,1;DOID:10165,5.42e-15,1;DOID:1798,5.42e-15,1;DOID:170,8.11e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!6.41e-46!14;UBERON:0000158!6.41e-46!14;UBERON:0003124!2.87e-34!7;UBERON:0000478!4.47e-26!24;UBERON:0000476!3.11e-21!3;UBERON:0000920!3.11e-21!3;UBERON:0001987!1.29e-15!4;UBERON:0004340!1.29e-15!4;UBERON:0000305!2.72e-15!7;UBERON:0004871!2.11e-13!8;UBERON:0004923!5.76e-10!57;UBERON:0001736!9.10e-08!1;UBERON:0006298!9.10e-08!1 | |ontology_enrichment_uberon=UBERON:0005631!6.41e-46!14;UBERON:0000158!6.41e-46!14;UBERON:0003124!2.87e-34!7;UBERON:0000478!4.47e-26!24;UBERON:0000476!3.11e-21!3;UBERON:0000920!3.11e-21!3;UBERON:0001987!1.29e-15!4;UBERON:0004340!1.29e-15!4;UBERON:0000305!2.72e-15!7;UBERON:0004871!2.11e-13!8;UBERON:0004923!5.76e-10!57;UBERON:0001736!9.10e-08!1;UBERON:0006298!9.10e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.40e-47;10!UBERON:0000158;1.40e-47;10!UBERON:0000478;1.10e-43;24!UBERON:0003124;4.42e-41;3!UBERON:0000920;4.42e-41;3!UBERON:0001987;4.28e-30;4!UBERON:0000305;1.39e-17;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.34e-75,14;UBERON:0000158,2.34e-75,14;UBERON:0003124,8.01e-68,7;UBERON:0000478,1.10e-43,24;UBERON:0000920,4.42e-41,3;UBERON:0001987,4.28e-30,4;UBERON:0004340,4.28e-30,4;UBERON:0000305,1.39e-17,7;UBERON:0004871,1.81e-15,8;UBERON:0004923,2.36e-15,66 | |||
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|short_description=p4@CAPN6 | |short_description=p4@CAPN6 | ||
}} | }} |
Latest revision as of 01:31, 19 September 2015
Short description: | p4@CAPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPN6_5end |
Coexpression cluster: | C533_chorionic_amniotic_pancreatic_placenta_choriocarcinoma_Placental_mesothelioma |
Association with transcript: | 46bp_to_ENST00000541758_5end |
EntrezGene: | CAPN6 |
HGNC: | 1483 |
UniProt: | F5GWQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.99e-44 | 19 |
chorionic membrane mesenchymal stem cell | 4.42e-41 | 3 |
amnion mesenchymal stem cell | 2.47e-24 | 5 |
placental epithelial cell | 2.32e-18 | 3 |
germ line cell | 1.37e-08 | 7 |
germ cell | 1.37e-08 | 7 |
cortical cell of adrenal gland | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.34e-75 | 14 |
membranous layer | 2.34e-75 | 14 |
chorion | 8.01e-68 | 7 |
extraembryonic structure | 1.10e-43 | 24 |
egg chorion | 4.42e-41 | 3 |
placenta | 4.28e-30 | 4 |
allantois | 4.28e-30 | 4 |
amnion | 1.39e-17 | 7 |
somatic layer of lateral plate mesoderm | 1.81e-15 | 8 |
organ component layer | 2.36e-15 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.42e-15 | 1 |
endocrine pancreas cancer | 5.42e-15 | 1 |
pancreatic endocrine carcinoma | 5.42e-15 | 1 |
endocrine gland cancer | 8.11e-10 | 6 |