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{{UBERON
{{UBERON
|id=UBERON:0001310
|name=umbilical artery
|namespace=
|def="The umbilical artery is a paired artery (with one for each half of the body) that is found in the abdominal and pelvic regions. In the fetus, it extends into the umbilical cord. [WP,unvetted]." [Wikipedia:Umbilical_artery]
|xref=BTO:0000841;;EHDAA:1026;;EHDAA:410;;EMAPA:16331;;EMAPA:16372;;FMA:18820;;GAID:516;;http://upload.wikimedia.org/wikipedia/commons/thumb/e/ee/Gray502.png/200px-Gray502.png;;MA:0002072;;MESH:A.07.231.114.929;;ncithesaurus:Umbilical_Artery;;OpenCyc:Mx4rCWdhMGWbEd2AAABQjYGu0g;;RETIRED_EHDAA2:0002106;;SCTID:261404000
|is_a=UBERON:0001637
|synonym=
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_18820-MA_0002072
|alt_id=UBERON:FMA_18820-MA_0002072
|disjoint_from=
|comment=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The umbilical artery is a paired artery (with one for each half of the body) that is found in the abdominal and pelvic regions. In the fetus, it extends into the umbilical cord. [WP,unvetted]." [Wikipedia:Umbilical_artery]
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001310
|is_a=UBERON:0001637 ;;UBERON:0010260
|is_obsolete=
|located_in=
|located_in=
|name=umbilical artery
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=uberon_slim
|synonym="a. umbilicalis" RELATED LATIN [Wikipedia:Umbilical_artery]
|union_of=
|xref=BTO:0000841;;EHDAA:1026;;EHDAA:410;;EMAPA:16331;;EMAPA:16372;;FMA:18820;;GAID:516;;http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/e/ee/Gray502.png/200px-Gray502.png;;MA:0002072;;MESH:A.07.231.114.929;;ncithesaurus:Umbilical_Artery;;OpenCyc:Mx4rCWdhMGWbEd2AAABQjYGu0g;;RETIRED_EHDAA2:0002106;;SCTID:261404000
}}
}}

Latest revision as of 17:17, 12 September 2014

Name:umbilical artery
Namespace:FANTOM
Definition:"The umbilical artery is a paired artery (with one for each half of the body) that is found in the abdominal and pelvic regions. In the fetus, it extends into the umbilical cord. [WP,unvetted]." [Wikipedia:Umbilical_artery]
Xrefs:
links:

BTO:0000841
EHDAA:1026
EHDAA:410
EMAPA:16331
EMAPA:16372
FMA:18820
GAID:516
[ Gray502.png Gray502.png]
[ 200px-Gray502.png 200px-Gray502.png]
MA:0002072
MESH:A.07.231.114.929
ncithesaurus:Umbilical_Artery
OpenCyc:Mx4rCWdhMGWbEd2AAABQjYGu0g
RETIRED_EHDAA2:0002106

SCTID:261404000
Synonyms: "a. umbilicalis" RELATED LATIN [Wikipedia:Umbilical_artery]
Alt_id: UBERON:FMA_18820-MA_0002072
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001637(artery),UBERON:0010260(umbilical blood vessel)



Children

part of:CL:0002594 (smooth muscle cell of the umbilical artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
  • 11290-117A3 (Smooth Muscle Cells - Umbilical Artery, donor1)
  • 11367-117I8 (Smooth Muscle Cells - Umbilical Artery, donor2)
  • 11439-118H8 (Smooth Muscle Cells - Umbilical Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001310 (umbilical artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.58e-74FFCP PHASE2:Hg19::chr13:28896641..28896653,-#_e0175a683e9a7b0d0fc49cc3cc5658f7p5@FLT1
2.58e-74FFCP PHASE1:Hg19::chr13:28896641..28896653,-#_e0175a683e9a7b0d0fc49cc3cc5658f7p5@FLT1
7.04e-74FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_576ca7b63125602e8a9b72b6bb1cfc11p@chr3:42515138..42515150, -
7.04e-74FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_576ca7b63125602e8a9b72b6bb1cfc11p@chr3:42515138..42515150, -
4.67e-66FFCP PHASE2:Hg19::chr11:116728907..116728948,+#_aa93083b716b9f3d57b789112aab7c80p2@CU690121
4.67e-66FFCP PHASE1:Hg19::chr11:116728907..116728948,+#_aa93083b716b9f3d57b789112aab7c80p2@CU690121
4.69e-54FFCP PHASE2:Hg19::chr13:28903811..28903815,-#_83386e52ad5ffbd7e99b43c5ee92cc1dp3@FLT1
4.69e-54FFCP PHASE1:Hg19::chr13:28903811..28903815,-#_83386e52ad5ffbd7e99b43c5ee92cc1dp3@FLT1
1.47e-44FFCP PHASE2:Hg19::chr1:243433014..243433053,+#_8ef66d5a3a66131c6c78afa9501696d3p@chr1:243433014..243433053, +
1.47e-44FFCP PHASE1:Hg19::chr1:243433014..243433053,+#_8ef66d5a3a66131c6c78afa9501696d3p@chr1:243433014..243433053, +
1.31e-40FFCP PHASE1:Hg19::chr8:90556171..90556173,+#_8d5c240b254ef46238f3ab26771fbd4cp@chr8:90556171..90556173, +
1.31e-40FFCP PHASE2:Hg19::chr8:90556171..90556173,+#_8d5c240b254ef46238f3ab26771fbd4cp@chr8:90556171..90556173, +
3.31e-40FFCP PHASE2:Hg19::chr1:225516893..225516902,-#_343fa0d610a128f7d159ed47eaa8abe1p@chr1:225516893..225516902, -
3.31e-40FFCP PHASE1:Hg19::chr1:225516893..225516902,-#_343fa0d610a128f7d159ed47eaa8abe1p@chr1:225516893..225516902, -
4.05e-40FFCP PHASE2:Hg19::chr12:65928345..65928348,-#_53986ed4c5fa70146999710f5f5593a4p@chr12:65928345..65928348, -
4.05e-40FFCP PHASE1:Hg19::chr12:65928345..65928348,-#_53986ed4c5fa70146999710f5f5593a4p@chr12:65928345..65928348, -
7.56e-35FFCP PHASE2:Hg19::chr10:90713570..90713574,+#_322528fd0598457d22bd3741ab888510p@chr10:90713570..90713574, +
7.56e-35FFCP PHASE1:Hg19::chr10:90713570..90713574,+#_322528fd0598457d22bd3741ab888510p@chr10:90713570..90713574, +
7.52e-34FFCP PHASE1:Hg19::chr16:86965053..86965066,-#_e98ef8c549ea685a013690c5bffa4366p@chr16:86965053..86965066, -
7.52e-34FFCP PHASE2:Hg19::chr16:86965053..86965066,-#_e98ef8c549ea685a013690c5bffa4366p@chr16:86965053..86965066, -
1.17e-33FFCP PHASE2:Hg19::chr1:219514172..219514177,-#_b8339604249c344293fe8eefec8a150ep@chr1:219514172..219514177, -
1.17e-33FFCP PHASE1:Hg19::chr1:219514172..219514177,-#_b8339604249c344293fe8eefec8a150ep@chr1:219514172..219514177, -
1.63e-33FFCP PHASE2:Hg19::chr4:48082192..48082207,-#_4d75429c246de76bd2ee6ffe7a8e972dp3@TXK
1.63e-33FFCP PHASE1:Hg19::chr4:48082192..48082207,-#_4d75429c246de76bd2ee6ffe7a8e972dp3@TXK
6.32e-31FFCP PHASE2:Hg19::chr10:93373465..93373477,-#_9c13381ddbf6ee174d5c88a13eaa9783p@chr10:93373465..93373477, -
6.32e-31FFCP PHASE1:Hg19::chr10:93373465..93373477,-#_9c13381ddbf6ee174d5c88a13eaa9783p@chr10:93373465..93373477, -
2.17e-29FFCP PHASE2:Hg19::chr2:133429091..133429104,-#_6039d3e6241a66ec14dd095a595b1a81p5@LYPD1
2.17e-29FFCP PHASE1:Hg19::chr2:133429091..133429104,-#_6039d3e6241a66ec14dd095a595b1a81p5@LYPD1
4.21e-29FFCP PHASE2:Hg19::chr12:66026167..66026180,+#_847483145c00df045e946e0ed0ac34f0p@chr12:66026167..66026180, +
4.21e-29FFCP PHASE1:Hg19::chr12:66026167..66026180,+#_847483145c00df045e946e0ed0ac34f0p@chr12:66026167..66026180, +
4.91e-28FFCP PHASE2:Hg19::chr12:54362447..54362462,-#_e08bf0726e6182291783669409ad4a72p1@HOTAIR
4.91e-28FFCP PHASE1:Hg19::chr12:54362447..54362462,-#_e08bf0726e6182291783669409ad4a72p1@HOTAIR
6.75e-28FFCP PHASE2:Hg19::chr3:190953512..190953525,-#_3a3614fcc636b53bc01421ccfa8b7e53p@chr3:190953512..190953525, -
6.75e-28FFCP PHASE1:Hg19::chr3:190953512..190953525,-#_3a3614fcc636b53bc01421ccfa8b7e53p@chr3:190953512..190953525, -
2.89e-27FFCP PHASE2:Hg19::chr3:111480425..111480456,+#_eaae49721e571709e70f9acdc29eca18p@chr3:111480425..111480456, +
2.89e-27FFCP PHASE1:Hg19::chr3:111480425..111480456,+#_eaae49721e571709e70f9acdc29eca18p@chr3:111480425..111480456, +
7.14e-26FFCP PHASE2:Hg19::chr16:77835332..77835343,-#_9c5d395da34aeb59c6bd30be93714793p@chr16:77835332..77835343, -
7.14e-26FFCP PHASE1:Hg19::chr16:77835332..77835343,-#_9c5d395da34aeb59c6bd30be93714793p@chr16:77835332..77835343, -
7.14e-26FFCP PHASE2:Hg19::chr5:95053358..95053363,+#_9c5d395da34aeb59c6bd30be93714793p39@RHOBTB3
7.14e-26FFCP PHASE1:Hg19::chr5:95053358..95053363,+#_9c5d395da34aeb59c6bd30be93714793p39@RHOBTB3
1.1e-25FFCP PHASE2:Hg19::chr2:17603323..17603339,-#_7d4c2f39457d383310e8e99da9c7615fp@chr2:17603323..17603339, -
1.1e-25FFCP PHASE1:Hg19::chr2:17603323..17603339,-#_7d4c2f39457d383310e8e99da9c7615fp@chr2:17603323..17603339, -
1.11e-25FFCP PHASE2:Hg19::chr5:142023708..142023717,-#_4e43278daeffa753be1a4d8c807ca337p12@FGF1
1.11e-25FFCP PHASE1:Hg19::chr5:142023708..142023717,-#_4e43278daeffa753be1a4d8c807ca337p12@FGF1
1.26e-25FFCP PHASE1:Hg19::chr11:116728814..116728821,-#_f596810c094e6815a4829519274df2e2p@chr11:116728814..116728821, -
1.26e-25FFCP PHASE2:Hg19::chr11:116728814..116728821,-#_f596810c094e6815a4829519274df2e2p@chr11:116728814..116728821, -
1.84e-25FFCP PHASE2:Hg19::chr2:72742814..72742824,-#_1ba74693ce4dedc4ca0747488ddff696p10@EXOC6B
1.84e-25FFCP PHASE1:Hg19::chr2:72742814..72742824,-#_1ba74693ce4dedc4ca0747488ddff696p10@EXOC6B
2.34e-25FFCP PHASE2:Hg19::chr3:141089144..141089148,-#_314cf1bb0d84c040ae830e2be751e281p@chr3:141089144..141089148, -
2.34e-25FFCP PHASE1:Hg19::chr3:141089144..141089148,-#_314cf1bb0d84c040ae830e2be751e281p@chr3:141089144..141089148, -
2.54e-25FFCP PHASE2:Hg19::chr5:95053322..95053347,+#_e441da708a9a849e2986a1a8a3760e28p14@RHOBTB3
2.54e-25FFCP PHASE1:Hg19::chr5:95053322..95053347,+#_e441da708a9a849e2986a1a8a3760e28p14@RHOBTB3
1.38e-23FFCP PHASE2:Hg19::chr12:54359771..54359813,+#_6174ba8fc805459c2d036f7cc346d3c7p@chr12:54359771..54359813, +
1.38e-23FFCP PHASE1:Hg19::chr12:54359771..54359813,+#_6174ba8fc805459c2d036f7cc346d3c7p@chr12:54359771..54359813, +
6.62e-22FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_977692274f42f75859598189d8a99972p@chr2:134548872..134548879, -
6.62e-22FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_977692274f42f75859598189d8a99972p@chr2:134548872..134548879, -
1.49e-21FFCP PHASE2:Hg19::chr16:30081719..30081734,-#_a95869a31ff9b5a82d2f7d338a2a965cp4@CU680643
1.49e-21FFCP PHASE1:Hg19::chr16:30081719..30081734,-#_a95869a31ff9b5a82d2f7d338a2a965cp4@CU680643
2.06e-21FFCP PHASE2:Hg19::chr18:8747536..8747542,-#_2f230bd47a62ccb4a495f009f55ed674p@chr18:8747536..8747542, -
2.06e-21FFCP PHASE1:Hg19::chr18:8747536..8747542,-#_2f230bd47a62ccb4a495f009f55ed674p@chr18:8747536..8747542, -
4.62e-21FFCP PHASE2:Hg19::chr16:31483266..31483280,-#_8f0a49cd46b73b2cf3c38f1103a19153p2@BC041840
4.62e-21FFCP PHASE1:Hg19::chr16:31483266..31483280,-#_8f0a49cd46b73b2cf3c38f1103a19153p2@BC041840
6.33e-21FFCP PHASE1:Hg19::chr17:46136725..46136736,+#_8273619f8a15b026776b998bb112bd4ap@chr17:46136725..46136736, +
6.33e-21FFCP PHASE2:Hg19::chr17:46136725..46136736,+#_8273619f8a15b026776b998bb112bd4ap@chr17:46136725..46136736, +
8.54e-21FFCP PHASE2:Hg19::chrX:13390461..13390482,+#_73ee97fd8cf3565f6243969dcd5339d3p@chrX:13390461..13390482, +
8.54e-21FFCP PHASE1:Hg19::chrX:13390461..13390482,+#_73ee97fd8cf3565f6243969dcd5339d3p@chrX:13390461..13390482, +
9.78e-21FFCP PHASE1:Hg19::chr3:45245731..45245737,-#_2f9a62bd94f0817498bf268fb96c0829p@chr3:45245731..45245737, -
9.78e-21FFCP PHASE2:Hg19::chr3:45245731..45245737,-#_2f9a62bd94f0817498bf268fb96c0829p@chr3:45245731..45245737, -
1.28e-20FFCP PHASE2:Hg19::chr3:106464246..106464276,-#_128cdf177e066ac08863c6e0fdbbe7cbp@chr3:106464246..106464276, -
1.28e-20FFCP PHASE1:Hg19::chr3:106464246..106464276,-#_128cdf177e066ac08863c6e0fdbbe7cbp@chr3:106464246..106464276, -
1.56e-20FFCP PHASE2:Hg19::chr2:72742849..72742865,-#_8d6311d065f96086a4b8ae96eae24121p9@EXOC6B
1.56e-20FFCP PHASE1:Hg19::chr2:72742849..72742865,-#_8d6311d065f96086a4b8ae96eae24121p9@EXOC6B
3.56e-20FFCP PHASE2:Hg19::chr2:74136186..74136244,+#_875ea3241f9940cc940bc2b5f0894d38p@chr2:74136186..74136244, +
3.56e-20FFCP PHASE1:Hg19::chr2:74136186..74136244,+#_875ea3241f9940cc940bc2b5f0894d38p@chr2:74136186..74136244, +
1.38e-19FFCP PHASE1:Hg19::chr11:102661008..102661029,-#_989d2e50cedabe7bb805b050df2ef0bbp@chr11:102661008..102661029, -
1.38e-19FFCP PHASE2:Hg19::chr11:102661008..102661029,-#_989d2e50cedabe7bb805b050df2ef0bbp@chr11:102661008..102661029, -
3.13e-19FFCP PHASE2:Hg19::chr18:20140144..20140184,+#_56702edaf9da1bcf9f2507e8ba03f7ecp@chr18:20140144..20140184, +
3.13e-19FFCP PHASE1:Hg19::chr18:20140144..20140184,+#_56702edaf9da1bcf9f2507e8ba03f7ecp@chr18:20140144..20140184, +
3.95e-19FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_4f705f43167d77c6133f8327900384dap@chr11:102661517..102661541, -
3.95e-19FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_4f705f43167d77c6133f8327900384dap@chr11:102661517..102661541, -
5.16e-19FFCP PHASE2:Hg19::chr8:22418409..22418450,+#_461794bf778604345e379e0071de280bp42@SORBS3
5.16e-19FFCP PHASE1:Hg19::chr8:22418409..22418450,+#_461794bf778604345e379e0071de280bp42@SORBS3
5.88e-19FFCP PHASE2:Hg19::chr2:74129552..74129589,-#_8509c9bc5cc2c8cce6e38f962559469cp@chr2:74129552..74129589, -
5.88e-19FFCP PHASE1:Hg19::chr2:74129552..74129589,-#_8509c9bc5cc2c8cce6e38f962559469cp@chr2:74129552..74129589, -
6.33e-19FFCP PHASE2:Hg19::chr2:133429062..133429090,-#_c48d143b229d5f4ad9c876e3fb7ec17bp2@LYPD1
6.33e-19FFCP PHASE1:Hg19::chr2:133429062..133429090,-#_c48d143b229d5f4ad9c876e3fb7ec17bp2@LYPD1
6.77e-19FFCP PHASE2:Hg19::chr2:216720351..216720357,+#_0ca6da15971c1d32dc3bf43d7b7f73dcp@chr2:216720351..216720357, +
6.77e-19FFCP PHASE1:Hg19::chr2:216720351..216720357,+#_0ca6da15971c1d32dc3bf43d7b7f73dcp@chr2:216720351..216720357, +
1.16e-18FFCP PHASE2:Hg19::chr6:121843766..121843798,+#_794f246ca09fb8f229e4ffde112151fdp@chr6:121843766..121843798, +
1.16e-18FFCP PHASE1:Hg19::chr6:121843766..121843798,+#_794f246ca09fb8f229e4ffde112151fdp@chr6:121843766..121843798, +
1.16e-18FFCP PHASE2:Hg19::chr14:38679569..38679581,+#_794f246ca09fb8f229e4ffde112151fdp@chr14:38679569..38679581, +
1.16e-18FFCP PHASE1:Hg19::chr14:38679569..38679581,+#_794f246ca09fb8f229e4ffde112151fdp@chr14:38679569..38679581, +
2.32e-18FFCP PHASE1:Hg19::chr7:41956273..41956284,-#_46a7207fb32b87838ed06b48487cd138p@chr7:41956273..41956284, -
2.32e-18FFCP PHASE2:Hg19::chr7:41956273..41956284,-#_46a7207fb32b87838ed06b48487cd138p@chr7:41956273..41956284, -
3.53e-18FFCP PHASE2:Hg19::chr4:7846380..7846392,-#_c1ab7437750ac3a69dccd0c44fbadfcep@chr4:7846380..7846392, -
3.53e-18FFCP PHASE1:Hg19::chr4:7846380..7846392,-#_c1ab7437750ac3a69dccd0c44fbadfcep@chr4:7846380..7846392, -
4.75e-18FFCP PHASE2:Hg19::chr2:74146666..74146687,+#_fb3731369cf8caa7853e1addaf0bf787p@chr2:74146666..74146687, +
4.75e-18FFCP PHASE1:Hg19::chr2:74146666..74146687,+#_fb3731369cf8caa7853e1addaf0bf787p@chr2:74146666..74146687, +
7.43e-18FFCP PHASE2:Hg19::chr17:40672344..40672359,+#_900706d41487a3e45d3aaec0b4348872p4@ATP6V0A1
7.43e-18FFCP PHASE1:Hg19::chr17:40672344..40672359,+#_900706d41487a3e45d3aaec0b4348872p4@ATP6V0A1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001310&oldid=3277229"