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{{UBERON
{{UBERON
|id=UBERON:0003504
|alt_id=
|name=respiratory system blood vessel
|namespace=
|def="A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|xref=MA:0001799
|is_a=UBERON:0001981;;UBERON:0004807
|synonym="apparatus respiratorius blood vessel" EXACT [OBOL:automatic];;"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic];;"blood vessel of respiratory system" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003504
|is_a=UBERON:0001981
|is_obsolete=
|located_in=
|located_in=
|name=respiratory system blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001004
|part_of=UBERON:0001004
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="apparatus respiratorius blood vessel" EXACT [OBOL:automatic];;"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic];;"blood vessel of respiratory system" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0001799
}}
}}

Latest revision as of 17:40, 12 September 2014

Name:respiratory system blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001799
Synonyms: "apparatus respiratorius blood vessel" EXACT [OBOL:automatic]
"blood vessel of apparatus respiratorius" EXACT [OBOL:automatic]
"blood vessel of respiratory system" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001981(blood vessel)
part_of:UBERON:0001004(respiratory system)



Children

is a:UBERON:0003643 (respiratory system arterial blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003504 (respiratory system blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_e30c81a495473a121a5c8e0b2ebce59ep@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_e30c81a495473a121a5c8e0b2ebce59ep@chr8:90366581..90366594, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_e30c81a495473a121a5c8e0b2ebce59ep@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_e30c81a495473a121a5c8e0b2ebce59ep@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_e30c81a495473a121a5c8e0b2ebce59ep@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_e30c81a495473a121a5c8e0b2ebce59ep@chr6:21648948..21648949, +
2.74e-50FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_d873841cd7d61df5cdee96de465d45cfp@chr4:70707556..70707558, -
2.74e-50FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_d873841cd7d61df5cdee96de465d45cfp@chr4:70707556..70707558, -
4.52e-50FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_748a2c2d962c53c9572600b5e60f65bcp14@FAS
4.52e-50FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_748a2c2d962c53c9572600b5e60f65bcp26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_748a2c2d962c53c9572600b5e60f65bcp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_748a2c2d962c53c9572600b5e60f65bcp@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_748a2c2d962c53c9572600b5e60f65bcp@chr8:120651826..120651840, -
4.52e-50FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_748a2c2d962c53c9572600b5e60f65bcp26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_748a2c2d962c53c9572600b5e60f65bcp@chr8:120651826..120651840, -
4.52e-50FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_748a2c2d962c53c9572600b5e60f65bcp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_748a2c2d962c53c9572600b5e60f65bcp14@FAS
4.52e-50FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_748a2c2d962c53c9572600b5e60f65bcp@chrX:23072856..23072859, -
3.61e-34FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_056b656258a22928a9bfb0fdec985fe1p@chr4:70707608..70707615, -
3.61e-34FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_056b656258a22928a9bfb0fdec985fe1p@chr4:70707608..70707615, -
5.04e-34FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_cbeddd52b8b359174fed1a71bc65ec7ep@chr4:70690584..70690589, +
5.04e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr17:76824975..76824978, -
5.04e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr11:131614903..131614910, -
5.04e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr3:156258392..156258395, -
5.04e-34FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_cbeddd52b8b359174fed1a71bc65ec7ep@chr4:70690584..70690589, +
5.04e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr17:76824975..76824978, -
5.04e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_cbeddd52b8b359174fed1a71bc65ec7ep@chr11:131614903..131614910, -
7.05e-34FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr8:134047162..134047169, +
7.05e-34FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_7afc2f5ea229a9e315f882a3c733a51ap1@ENST00000406333
7.05e-34FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_7afc2f5ea229a9e315f882a3c733a51ap13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr7:22687639..22687644, +
7.05e-34FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_7afc2f5ea229a9e315f882a3c733a51ap19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr13:38136724..38136726, +
7.05e-34FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_7afc2f5ea229a9e315f882a3c733a51ap1@CACNG8
7.05e-34FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr4:38147484..38147500, -
7.05e-34FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_7afc2f5ea229a9e315f882a3c733a51ap19@AMOTL1
7.05e-34FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr1:93043102..93043113, -
7.05e-34FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_7afc2f5ea229a9e315f882a3c733a51ap1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_7afc2f5ea229a9e315f882a3c733a51ap13@PTGIS
7.05e-34FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_7afc2f5ea229a9e315f882a3c733a51ap@chrX:140904171..140904173, +
7.05e-34FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr8:134047162..134047169, +
7.05e-34FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr7:22687639..22687644, +
7.05e-34FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_7afc2f5ea229a9e315f882a3c733a51ap@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_7afc2f5ea229a9e315f882a3c733a51ap1@CACNG8
7.05e-34FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_7afc2f5ea229a9e315f882a3c733a51ap@chr4:38147484..38147500, -
7.05e-34FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_7afc2f5ea229a9e315f882a3c733a51ap@chrX:140904171..140904173, +
5.56e-26FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_4bed650850bcc79a8ef6a66213fe7c9fp@chr9:33797893..33797903, +
5.56e-26FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_4bed650850bcc79a8ef6a66213fe7c9fp@chr9:33797893..33797903, +
7.14e-26FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_29d2a00490fbf705ad822b926ef1cf25p13@RAB11FIP5
7.14e-26FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_29d2a00490fbf705ad822b926ef1cf25p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr4:891819..891820,-#_29d2a00490fbf705ad822b926ef1cf25p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_29d2a00490fbf705ad822b926ef1cf25p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_29d2a00490fbf705ad822b926ef1cf25p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_29d2a00490fbf705ad822b926ef1cf25p1@ENST00000492301
7.14e-26FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_29d2a00490fbf705ad822b926ef1cf25p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_29d2a00490fbf705ad822b926ef1cf25p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_29d2a00490fbf705ad822b926ef1cf25p13@RAB11FIP5
7.14e-26FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_29d2a00490fbf705ad822b926ef1cf25p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_29d2a00490fbf705ad822b926ef1cf25p16@HMGA1
7.14e-26FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_29d2a00490fbf705ad822b926ef1cf25p1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr4:891819..891820,-#_29d2a00490fbf705ad822b926ef1cf25p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_29d2a00490fbf705ad822b926ef1cf25p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_29d2a00490fbf705ad822b926ef1cf25p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_29d2a00490fbf705ad822b926ef1cf25p16@HMGA1
7.14e-26FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_29d2a00490fbf705ad822b926ef1cf25p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_29d2a00490fbf705ad822b926ef1cf25p@chr18:65175930..65175941, +
9.18e-26FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr2:238116338..238116342, -
9.18e-26FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr1:185703364..185703371, -
9.18e-26FFCP PHASE1:Hg19::chr19:681941..681952,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p5@BC031228
9.18e-26FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr3:11675748..11675759, -
9.18e-26FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr5:146890197..146890224, -
9.18e-26FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p28@ANK2
9.18e-26FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p1@ENST00000521989
9.18e-26FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr15:71371688..71371691, -
9.18e-26FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p5@BC031228
9.18e-26FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr19:681941..681952,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr2:238116338..238116342, -
9.18e-26FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr1:185703364..185703371, -
9.18e-26FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr6:148593641..148593643, +
9.18e-26FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr5:146890197..146890224, -
9.18e-26FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_b9c8ad0a8b6f5655f98e6e99814d8e47p@chr2:84316409..84316414, -

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