Personal tools

UBERON:0005103: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0005103
|alt_id=
|name=mesonephric epithelium
|namespace=
|def="An epithelium that is part of a mesonephros [Obol]." [OBOL:automatic]
|xref=
|is_a=UBERON:0004819
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelium that is part of a mesonephros [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005103
|is_a=UBERON:0004819 ;;UBERON:0012275
|is_obsolete=
|located_in=
|located_in=
|name=mesonephric epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000080
|part_of=UBERON:0000080
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 17:50, 12 September 2014

Name:mesonephric epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a mesonephros [Obol]." [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004819(kidney epithelium),UBERON:0012275(meso-epithelium)
part_of:UBERON:0000080(mesonephros)



Children

is a:UBERON:0000083 (mesonephric tubule)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005103 (mesonephric epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_079ba668e72a727a8271830aa0b2d86bp4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_079ba668e72a727a8271830aa0b2d86bp4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_de66c1d824a396b5b7110a21a353a612p3@Lcn12
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_de66c1d824a396b5b7110a21a353a612p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_de66c1d824a396b5b7110a21a353a612p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_de66c1d824a396b5b7110a21a353a612p@chr17:73221016..73221031, +
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_de66c1d824a396b5b7110a21a353a612p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_de66c1d824a396b5b7110a21a353a612p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_de66c1d824a396b5b7110a21a353a612p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_de66c1d824a396b5b7110a21a353a612p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_de66c1d824a396b5b7110a21a353a612p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_de66c1d824a396b5b7110a21a353a612p2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_de66c1d824a396b5b7110a21a353a612p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_de66c1d824a396b5b7110a21a353a612p@chrX:20419453..20419476, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_de66c1d824a396b5b7110a21a353a612p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_de66c1d824a396b5b7110a21a353a612p2@Wfdc9
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_de66c1d824a396b5b7110a21a353a612p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_de66c1d824a396b5b7110a21a353a612p@chr4:33600466..33600491, -
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_de66c1d824a396b5b7110a21a353a612p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_de66c1d824a396b5b7110a21a353a612p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_de66c1d824a396b5b7110a21a353a612p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_de66c1d824a396b5b7110a21a353a612p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_de66c1d824a396b5b7110a21a353a612p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_de66c1d824a396b5b7110a21a353a612p@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_de66c1d824a396b5b7110a21a353a612p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_de66c1d824a396b5b7110a21a353a612p@chr10:28772042..28772046, -
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_de66c1d824a396b5b7110a21a353a612p3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_de66c1d824a396b5b7110a21a353a612p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_de66c1d824a396b5b7110a21a353a612p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_de66c1d824a396b5b7110a21a353a612p@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_de66c1d824a396b5b7110a21a353a612p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_de66c1d824a396b5b7110a21a353a612p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_de66c1d824a396b5b7110a21a353a612p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_de66c1d824a396b5b7110a21a353a612p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_de66c1d824a396b5b7110a21a353a612p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_de66c1d824a396b5b7110a21a353a612p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_de66c1d824a396b5b7110a21a353a612p2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_de66c1d824a396b5b7110a21a353a612p3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_de66c1d824a396b5b7110a21a353a612p@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_de66c1d824a396b5b7110a21a353a612p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_de66c1d824a396b5b7110a21a353a612p19@Clu
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_de66c1d824a396b5b7110a21a353a612p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_de66c1d824a396b5b7110a21a353a612p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_de66c1d824a396b5b7110a21a353a612p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_de66c1d824a396b5b7110a21a353a612p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_de66c1d824a396b5b7110a21a353a612p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_de66c1d824a396b5b7110a21a353a612p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_de66c1d824a396b5b7110a21a353a612p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_de66c1d824a396b5b7110a21a353a612p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_de66c1d824a396b5b7110a21a353a612p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_de66c1d824a396b5b7110a21a353a612p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_de66c1d824a396b5b7110a21a353a612p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_de66c1d824a396b5b7110a21a353a612p@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_de66c1d824a396b5b7110a21a353a612p@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_de66c1d824a396b5b7110a21a353a612p@chr13:21379065..21379072, -
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_de66c1d824a396b5b7110a21a353a612p@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_de66c1d824a396b5b7110a21a353a612p@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_de66c1d824a396b5b7110a21a353a612p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_de66c1d824a396b5b7110a21a353a612p@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_de66c1d824a396b5b7110a21a353a612p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_de66c1d824a396b5b7110a21a353a612p3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_de66c1d824a396b5b7110a21a353a612p@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_de66c1d824a396b5b7110a21a353a612p@chr8:19141471..19141518, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_de66c1d824a396b5b7110a21a353a612p11@Wars
3.28e-58FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_de66c1d824a396b5b7110a21a353a612p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_de66c1d824a396b5b7110a21a353a612p@chr5:112721323..112721328, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_de66c1d824a396b5b7110a21a353a612p@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_de66c1d824a396b5b7110a21a353a612p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_de66c1d824a396b5b7110a21a353a612p@chr4:134893699..134893708, +
3.28e-58FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_de66c1d824a396b5b7110a21a353a612p@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_de66c1d824a396b5b7110a21a353a612p11@Prrx1
3.28e-58FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_de66c1d824a396b5b7110a21a353a612p@chr18:62775330..62775347, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_de66c1d824a396b5b7110a21a353a612p@chrX:50280181..50280192, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_de66c1d824a396b5b7110a21a353a612p5@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_de66c1d824a396b5b7110a21a353a612p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_de66c1d824a396b5b7110a21a353a612p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_de66c1d824a396b5b7110a21a353a612p3@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_de66c1d824a396b5b7110a21a353a612p@chr11:59845404..59845416, -
3.28e-58FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_de66c1d824a396b5b7110a21a353a612p@chr1:87922962..87922982, +
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_de66c1d824a396b5b7110a21a353a612p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_de66c1d824a396b5b7110a21a353a612p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_de66c1d824a396b5b7110a21a353a612p@chr14:103837894..103837900, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_de66c1d824a396b5b7110a21a353a612p@chrX:130496166..130496188, -
3.28e-58FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_de66c1d824a396b5b7110a21a353a612p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_de66c1d824a396b5b7110a21a353a612p@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_de66c1d824a396b5b7110a21a353a612p@chr8:19062951..19062955, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_de66c1d824a396b5b7110a21a353a612p4@Bpi
3.28e-58FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_de66c1d824a396b5b7110a21a353a612p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_de66c1d824a396b5b7110a21a353a612p3@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_de66c1d824a396b5b7110a21a353a612p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_de66c1d824a396b5b7110a21a353a612p@chr7:65995799..65995810, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_de66c1d824a396b5b7110a21a353a612p@chr5:110773795..110773801, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_de66c1d824a396b5b7110a21a353a612p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_de66c1d824a396b5b7110a21a353a612p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_de66c1d824a396b5b7110a21a353a612p@chr16:28323634..28323657, -