UBERON:0005292: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [UBERON:cjm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005292 | |||
|is_a=UBERON:0000478 ;;UBERON:0000479 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=extraembryonic tissue | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0016887 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="extra-embryonic tissue" EXACT [] | ||
|union_of= | |||
|xref=BTO:0003360;;EFO:0001406;;MAT:0000061;;MIAA:0000061 | |||
}} | }} | ||
Latest revision as of 17:52, 12 September 2014
| Name: | extraembryonic tissue | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: | "extra-embryonic tissue" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0000479(tissue) |
|---|---|
| part_of: | UBERON:0016887(entire extraembryonic component) |
Children
| is a: | UBERON:0003422 (mesenchyme of umbilical cord),UBERON:0005728 (extraembryonic mesoderm) |
|---|---|
| part of: | FF:0000216 (chicken extraembryonic),FF:0000218 (chicken embryo extraembryonic tissue day7 HH32),FF:0000219 (chicken embryo extraembryonic tissue day15 HH41) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005292 (extraembryonic tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
