UBERON:0005406: Difference between revisions

Latest revision as of 17:53, 12 September 2014

perirenal fat

Namespace:

FANTOM

Definition:

"The adipose capsule of kidney (or perinephric fat or perirenal fat) is a structure between the renal fascia and renal capsule, and may be regarded as a part of the latter. A different structure, the pararenal fat, is the adipose tissue superficial to the renal fascia." [Wikipedia:Adipose_capsule_of_kidney]

Xrefs:

Expandlinks:

Synonyms:

"adipose capsule of kidney" RELATED [MA:0002975]
"capsula adiposa renis" RELATED LATIN [Wikipedia:Adipose_capsule_of_kidney]
"fatty capsule of kidney" RELATED [MA:0002975]
"perinephric fat" RELATED [MA:0002975]
"periphrenic fascia" RELATED [MA:0002975]
"Perirenal fascia" EXACT [FMA:20502]
"perirenal fascia" RELATED [MA:0002975]
"perirenal fat capsule" RELATED ATTRIBUTION_REQUIRED [MA:0002975]

Comments:

TODO - split perinephric / perirenal

Alt_id:

UBERON:MA_0002975-FMA_20502

Ontology association Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies. link to ontology dataset data

Parents

is_a:	UBERON:0001013(adipose tissue)

Children

part of:	CL:0002581 (perirenal preadipocyte),CL:0002616 (perirenal adipocyte cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

11330-117E7
11469-119C2 (Preadipocyte - perirenal, donor1)
11476-119C9 (Adipocyte - perirenal, donor1)
11477-119D1

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005406 (perirenal fat), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
1.55e-98	FFCP PHASE1:Hg19::chr18:77016280..77016281,-	p@chr18:77016280..77016281, -
1.55e-98	FFCP PHASE2:Hg19::chr18:77016280..77016281,-	p@chr18:77016280..77016281, -
1.56e-79	FFCP PHASE2:Hg19::chr3:42885183..42885192,-	p@chr3:42885183..42885192, -
1.56e-79	FFCP PHASE1:Hg19::chr3:42885183..42885192,-	p@chr3:42885183..42885192, -
2.02e-57	FFCP PHASE1:Hg19::chr12:15034824..15034835,+	p@chr12:15034824..15034835, +
2.02e-57	FFCP PHASE2:Hg19::chr12:15034824..15034835,+	p@chr12:15034824..15034835, +
1.46e-50	FFCP PHASE2:Hg19::chr18:37550533..37550548,+	p@chr18:37550533..37550548, +
1.46e-50	FFCP PHASE1:Hg19::chr18:37550533..37550548,+	p@chr18:37550533..37550548, +
1.88e-50	FFCP PHASE2:Hg19::chr9:72785492..72785496,+	p@chr9:72785492..72785496, +
1.88e-50	FFCP PHASE1:Hg19::chr9:72785492..72785496,+	p@chr9:72785492..72785496, +
2.42e-50	FFCP PHASE1:Hg19::chr6:30811934..30811939,-	p@chr6:30811934..30811939, -
2.42e-50	FFCP PHASE2:Hg19::chr6:30811934..30811939,-	p@chr6:30811934..30811939, -
3.11e-50	FFCP PHASE2:Hg19::chr19:682017..682027,+	p@chr19:682017..682027, +
3.11e-50	FFCP PHASE1:Hg19::chr19:682017..682027,+	p@chr19:682017..682027, +
4.52e-50	FFCP PHASE2:Hg19::chr7:27648198..27648201,+	p@chr7:27648198..27648201, +
4.52e-50	FFCP PHASE2:Hg19::chr19:19626086..19626104,-	p5@TSSK6
4.52e-50	FFCP PHASE1:Hg19::chr9:18777378..18777385,-	p@chr9:18777378..18777385, -
4.52e-50	FFCP PHASE1:Hg19::chr1:162892110..162892119,-	p@chr1:162892110..162892119, -
4.52e-50	FFCP PHASE1:Hg19::chr7:27648198..27648201,+	p@chr7:27648198..27648201, +
4.52e-50	FFCP PHASE1:Hg19::chr11:12301789..12301797,+	p@chr11:12301789..12301797, +
4.52e-50	FFCP PHASE1:Hg19::chr19:19626086..19626104,-	p5@TSSK6
4.52e-50	FFCP PHASE2:Hg19::chr11:12301789..12301797,+	p@chr11:12301789..12301797, +
4.52e-50	FFCP PHASE2:Hg19::chr9:18777378..18777385,-	p@chr9:18777378..18777385, -
4.52e-50	FFCP PHASE2:Hg19::chr1:162892110..162892119,-	p@chr1:162892110..162892119, -
5.15e-50	FFCP PHASE2:Hg19::chr8:74476227..74476231,-	p@chr8:74476227..74476231, -
5.15e-50	FFCP PHASE1:Hg19::chr8:74476227..74476231,-	p@chr8:74476227..74476231, -
6.61e-50	FFCP PHASE2:Hg19::chr11:73844693..73844711,-	p16@C2CD3
6.61e-50	FFCP PHASE1:Hg19::chr11:73844693..73844711,-	p16@C2CD3
4.0e-45	FFCP PHASE2:Hg19::chr8:26513180..26513184,-	p1@CU691153
4.0e-45	FFCP PHASE1:Hg19::chr8:26513180..26513184,-	p1@CU691153
6.26e-45	FFCP PHASE1:Hg19::chr12:15034956..15034967,-	p@chr12:15034956..15034967, -
6.26e-45	FFCP PHASE2:Hg19::chr12:15034956..15034967,-	p@chr12:15034956..15034967, -
7.83e-45	FFCP PHASE2:Hg19::chr6:132834443..132834454,-	p6@STX7
7.83e-45	FFCP PHASE2:Hg19::chr8:74501277..74501313,-	p@chr8:74501277..74501313, -
7.83e-45	FFCP PHASE1:Hg19::chr8:74501277..74501313,-	p@chr8:74501277..74501313, -
7.83e-45	FFCP PHASE1:Hg19::chr6:132834443..132834454,-	p6@STX7
1.1e-40	FFCP PHASE1:Hg19::chr8:117886399..117886420,-	p25@RAD21
1.1e-40	FFCP PHASE2:Hg19::chr8:117886399..117886420,-	p25@RAD21
1.34e-40	FFCP PHASE2:Hg19::chr7:28998372..28998378,-	p9@TRIL
1.34e-40	FFCP PHASE1:Hg19::chr10:22002796..22002833,+	p@chr10:22002796..22002833, +
1.34e-40	FFCP PHASE1:Hg19::chr7:28998372..28998378,-	p9@TRIL
1.34e-40	FFCP PHASE2:Hg19::chr10:22002796..22002833,+	p@chr10:22002796..22002833, +
2.01e-40	FFCP PHASE1:Hg19::chr11:103720186..103720199,-	p@chr11:103720186..103720199, -
2.01e-40	FFCP PHASE2:Hg19::chr11:103720186..103720199,-	p@chr11:103720186..103720199, -
1.89e-37	FFCP PHASE2:Hg19::chr6:35454312..35454323,-	p9@TEAD3
1.89e-37	FFCP PHASE1:Hg19::chr6:35454312..35454323,-	p9@TEAD3
2.27e-37	FFCP PHASE1:Hg19::chr9:72833376..72833380,+	p@chr9:72833376..72833380, +
2.27e-37	FFCP PHASE2:Hg19::chr9:72833376..72833380,+	p@chr9:72833376..72833380, +
3.94e-37	FFCP PHASE1:Hg19::chr8:27455513..27455516,+	p7@CU679734
3.94e-37	FFCP PHASE2:Hg19::chr8:74464406..74464424,-	p4@STAU2
3.94e-37	FFCP PHASE2:Hg19::chr8:27455513..27455516,+	p7@CU679734
3.94e-37	FFCP PHASE1:Hg19::chr8:74464406..74464424,-	p4@STAU2
8.2e-37	FFCP PHASE1:Hg19::chr19:18896607..18896614,-	p@chr19:18896607..18896614, -
8.2e-37	FFCP PHASE2:Hg19::chr19:18896607..18896614,-	p@chr19:18896607..18896614, -
1.84e-34	FFCP PHASE2:Hg19::chr1:23884914..23884939,-	p@chr1:23884914..23884939, -
1.84e-34	FFCP PHASE2:Hg19::chr19:681807..681839,-	p@chr19:681807..681839, -
1.84e-34	FFCP PHASE1:Hg19::chr1:23884914..23884939,-	p@chr1:23884914..23884939, -
1.84e-34	FFCP PHASE1:Hg19::chr19:681807..681839,-	p@chr19:681807..681839, -
2.18e-34	FFCP PHASE1:Hg19::chr3:124689214..124689218,-	p24@HEG1
2.18e-34	FFCP PHASE2:Hg19::chr3:124689214..124689218,-	p24@HEG1
3.61e-34	FFCP PHASE1:Hg19::chr10:85462978..85462980,-	p@chr10:85462978..85462980, -
3.61e-34	FFCP PHASE1:Hg19::chr2:111043689..111043690,+	p@chr2:111043689..111043690, +
3.61e-34	FFCP PHASE2:Hg19::chr10:85462978..85462980,-	p@chr10:85462978..85462980, -
3.61e-34	FFCP PHASE2:Hg19::chr17:46131516..46131519,+	p@chr17:46131516..46131519, +
3.61e-34	FFCP PHASE1:Hg19::chr17:46131516..46131519,+	p@chr17:46131516..46131519, +
3.61e-34	FFCP PHASE2:Hg19::chr2:111043689..111043690,+	p@chr2:111043689..111043690, +
5.04e-34	FFCP PHASE2:Hg19::chr9:72841128..72841129,+	p@chr9:72841128..72841129, +
5.04e-34	FFCP PHASE2:Hg19::chr15:32975140..32975144,+	p@chr15:32975140..32975144, +
5.04e-34	FFCP PHASE2:Hg19::chr4:165898744..165898754,-	p4@TRIM61
5.04e-34	FFCP PHASE2:Hg19::chr2:159375045..159375057,+	p@chr2:159375045..159375057, +
5.04e-34	FFCP PHASE2:Hg19::chr5:153418271..153418280,-	p5@FAM114A2
5.04e-34	FFCP PHASE2:Hg19::chr16:1652542..1652551,-	p@chr16:1652542..1652551, -
5.04e-34	FFCP PHASE1:Hg19::chr16:1652542..1652551,-	p@chr16:1652542..1652551, -
5.04e-34	FFCP PHASE1:Hg19::chr12:52643112..52643118,+	p7@KRT86
5.04e-34	FFCP PHASE1:Hg19::chr9:72841128..72841129,+	p@chr9:72841128..72841129, +
5.04e-34	FFCP PHASE1:Hg19::chr4:165898744..165898754,-	p4@TRIM61
5.04e-34	FFCP PHASE1:Hg19::chr2:159375045..159375057,+	p@chr2:159375045..159375057, +
5.04e-34	FFCP PHASE2:Hg19::chr12:52643112..52643118,+	p7@KRT86
5.04e-34	FFCP PHASE1:Hg19::chr5:153418271..153418280,-	p5@FAM114A2
5.04e-34	FFCP PHASE1:Hg19::chr15:32975140..32975144,+	p@chr15:32975140..32975144, +
7.05e-34	FFCP PHASE1:Hg19::chr15:66994941..66994954,+	p14@SMAD6
7.05e-34	FFCP PHASE2:Hg19::chr15:66994941..66994954,+	p14@SMAD6
7.05e-34	FFCP PHASE2:Hg19::chr16:83842085..83842095,+	p@chr16:83842085..83842095, +
7.05e-34	FFCP PHASE1:Hg19::chr9:72833439..72833449,+	p@chr9:72833439..72833449, +
7.05e-34	FFCP PHASE1:Hg19::chr16:83842085..83842095,+	p@chr16:83842085..83842095, +
7.05e-34	FFCP PHASE1:Hg19::chr8:26363864..26363889,-	p@chr8:26363864..26363889, -
7.05e-34	FFCP PHASE2:Hg19::chr22:29195391..29195402,-	p@chr22:29195391..29195402, -
7.05e-34	FFCP PHASE1:Hg19::chr10:111747405..111747410,+	p@chr10:111747405..111747410, +
7.05e-34	FFCP PHASE2:Hg19::chr9:72833439..72833449,+	p@chr9:72833439..72833449, +
7.05e-34	FFCP PHASE1:Hg19::chr22:29195391..29195402,-	p@chr22:29195391..29195402, -
7.05e-34	FFCP PHASE2:Hg19::chr8:26363864..26363889,-	p@chr8:26363864..26363889, -
7.05e-34	FFCP PHASE2:Hg19::chr10:111747405..111747410,+	p@chr10:111747405..111747410, +
5.37e-32	FFCP PHASE1:Hg19::chr9:72658586..72658589,+	p9@MAMDC2
5.37e-32	FFCP PHASE2:Hg19::chr9:72658586..72658589,+	p9@MAMDC2
1.6e-31	FFCP PHASE1:Hg19::chr4:164245890..164245892,-	p@chr4:164245890..164245892, -
1.6e-31	FFCP PHASE2:Hg19::chr4:164245890..164245892,-	p@chr4:164245890..164245892, -
1.87e-31	FFCP PHASE1:Hg19::chr7:40549076..40549087,+	p@chr7:40549076..40549087, +
1.87e-31	FFCP PHASE2:Hg19::chr7:40549076..40549087,+	p@chr7:40549076..40549087, +
2.18e-31	FFCP PHASE2:Hg19::chr1:204839198..204839211,+	p@chr1:204839198..204839211, +
2.18e-31	FFCP PHASE1:Hg19::chr1:204839198..204839211,+	p@chr1:204839198..204839211, +

Showing 1 to 100 of 100 entries

@@ Line 1: / Line 1: @@
 {{UBERON
-|id=UBERON:0005406
+|alt_id=UBERON:MA_0002975-FMA_20502
-|name=perirenal fat
-|namespace=
-|def="The adipose capsule of kidney (or perinephric fat or perirenal fat) is a structure between the renal fascia and renal capsule, and may be regarded as a part of the latter. A different structure, the pararenal fat, is the adipose tissue superficial to the renal fascia." [Wikipedia:Adipose_capsule_of_kidney]
-|xref=FMA:15876;;FMA:20502;;MA:0002975;;SCTID:246901006
-|is_a=UBERON:0001013
-|synonym="adipose capsule of kidney" RELATED [MA:0002975];;"fatty capsule of kidney" RELATED [MA:0002975];;"perinephric fat" RELATED [MA:0002975];;"periphrenic fascia" RELATED [MA:0002975];;"Perirenal fascia" EXACT [FMA:20502];;"perirenal fascia" RELATED [MA:0002975];;"perirenal fat capsule" RELATED ATTRIBUTION_REQUIRED [MA:0002975]
 |comment=TODO - split perinephric / perirenal
-|alt_id=UBERON:MA_0002975-FMA_20502
-|disjoint_from=
-|union_of=
 |created_by=
-|obo_creation_date=
+|def="The adipose capsule of kidney (or perinephric fat or perirenal fat) is a structure between the renal fascia and renal capsule, and may be regarded as a part of the latter. A different structure, the pararenal fat, is the adipose tissue superficial to the renal fascia." [Wikipedia:Adipose_capsule_of_kidney]
-|subset=
-|adjacent_to=
 |derives_from=
 |develops_from=
+|disjoint_from=
 |has_quality=
+|id=UBERON:0005406
+|is_a=UBERON:0001013
+|is_obsolete=
 |located_in=
+|name=perirenal fat
+|namespace=FANTOM
+|obo_creation_date=
 |part_of=
-|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
-|is_obsolete=
 |preceded_by=
+|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
+|subset=
+|synonym="adipose capsule of kidney" RELATED [MA:0002975];;"capsula adiposa renis" RELATED LATIN [Wikipedia:Adipose_capsule_of_kidney];;"fatty capsule of kidney" RELATED [MA:0002975];;"perinephric fat" RELATED [MA:0002975];;"periphrenic fascia" RELATED [MA:0002975];;"Perirenal fascia" EXACT [FMA:20502];;"perirenal fascia" RELATED [MA:0002975];;"perirenal fat capsule" RELATED ATTRIBUTION_REQUIRED [MA:0002975]
+|union_of=
+|xref=FMA:15876;;FMA:20502;;http://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg;;MA:0002975;;SCTID:246901006
 }}

Personal tools

UBERON:0005406: Difference between revisions - resource_browser

Search

Human

Mouse

Rat

Dog

Chicken

Macaque

Cross species

Other

Tools

UBERON:0005406: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 17:53, 12 September 2014

Ontology Tree: Loaded from BioPortal

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0