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{{CL
{{CL
|id=CL:0002490
|alt_id=
|name=organ of Corti supporting cell
|namespace=cell
|def="A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
|xref=
|is_a=CL:0002315
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-12-06T03:09:01Z
|def="A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002490
|is_a=CL:0002315
|is_obsolete=
|located_in=
|located_in=
|name=organ of Corti supporting cell
|namespace=FANTOM
|obo_creation_date=2010-12-06T03:09:01Z
|part_of=UBERON:0002227
|part_of=UBERON:0002227
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:43, 12 September 2014

Name:organ of Corti supporting cell
Namespace:FANTOM
Definition:"A supporting cell of the organ of Corti." [GOC:tfm, MP:0004300]
Created by:tmeehan
Creation date:2010-12-06T03:09:01Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002315(supporting cell of cochlea)
part_of:UBERON:0002227(spiral organ of cochlea)



Children


derives from:FF:0000279 (mouse Sox2-positive supporting cell- organ of corti sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002490 (organ of Corti supporting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr7:59135658..59135665,+#_13c60bd72679013c674fc169bfafd9c6p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr9:42139059..42139081,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE2:Mm9::chr10:67372807..67372809,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE1:Mm9::chr19:55270369..55270394,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr5:113939859..113939865,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE1:Mm9::chr7:59135658..59135665,+#_13c60bd72679013c674fc169bfafd9c6p22@Gas2
3.07e-86FFCP PHASE2:Mm9::chr15:94418486..94418491,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr11:119881548..119881551,-#_13c60bd72679013c674fc169bfafd9c6p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr5:92800684..92800687,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr10:97109619..97109632,+#_13c60bd72679013c674fc169bfafd9c6p5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr2:163517841..163517844,-#_13c60bd72679013c674fc169bfafd9c6p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr9:77109269..77109270,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr10:67372807..67372809,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:67372807..67372809, +
3.07e-86FFCP PHASE2:Mm9::chr4:151450365..151450374,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE2:Mm9::chr9:42147036..42147053,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE2:Mm9::chr14:102298599..102298602,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE2:Mm9::chr15:55289275..55289297,+#_13c60bd72679013c674fc169bfafd9c6p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr14:102291551..102291553,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE2:Mm9::chr5:113939919..113939925,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE2:Mm9::chr14:62578740..62578749,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr14:119912363..119912365,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr15:94418515..94418518,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE2:Mm9::chr10:24310748..24310749,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr5:92800735..92800736,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr14:62578740..62578749,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:62578740..62578749, +
3.07e-86FFCP PHASE2:Mm9::chr14:48406009..48406013,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418486..94418491,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418486..94418491, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619458..30619461,-#_13c60bd72679013c674fc169bfafd9c6p17@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr14:102291443..102291451,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE2:Mm9::chr9:77109306..77109314,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE2:Mm9::chr9:42207838..42207847,-#_13c60bd72679013c674fc169bfafd9c6p14@Tecta
3.07e-86FFCP PHASE2:Mm9::chr9:42202683..42202684,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42202683..42202684, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109269..77109270,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109269..77109270, -
3.07e-86FFCP PHASE1:Mm9::chr6:30619458..30619461,-#_13c60bd72679013c674fc169bfafd9c6p17@Tsga14
3.07e-86FFCP PHASE2:Mm9::chr10:97112452..97112459,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE1:Mm9::chr9:42139059..42139081,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42139059..42139081, -
3.07e-86FFCP PHASE1:Mm9::chr2:163517841..163517844,-#_13c60bd72679013c674fc169bfafd9c6p1@ENSMUST00000154065
3.07e-86FFCP PHASE2:Mm9::chr5:92800684..92800687,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800684..92800687, +
3.07e-86FFCP PHASE1:Mm9::chr14:102298599..102298602,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:102298599..102298602, +
3.07e-86FFCP PHASE1:Mm9::chr15:94418515..94418518,-#_13c60bd72679013c674fc169bfafd9c6p@chr15:94418515..94418518, -
3.07e-86FFCP PHASE1:Mm9::chr5:113939859..113939865,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939859..113939865, +
3.07e-86FFCP PHASE2:Mm9::chr6:30620092..30620097,+#_13c60bd72679013c674fc169bfafd9c6p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE2:Mm9::chr10:107349495..107349500,-#_13c60bd72679013c674fc169bfafd9c6p6@Otogl
3.07e-86FFCP PHASE1:Mm9::chr11:119881548..119881551,-#_13c60bd72679013c674fc169bfafd9c6p19@Aatk
3.07e-86FFCP PHASE1:Mm9::chr7:128226917..128226918,+#_13c60bd72679013c674fc169bfafd9c6p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr10:24310748..24310749,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:24310748..24310749, +
3.07e-86FFCP PHASE1:Mm9::chr14:119912363..119912365,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:119912363..119912365, +
3.07e-86FFCP PHASE2:Mm9::chr19:23001562..23001563,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE2:Mm9::chr19:55269566..55269577,-#_13c60bd72679013c674fc169bfafd9c6p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE1:Mm9::chr9:77109306..77109314,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:77109306..77109314, -
3.07e-86FFCP PHASE2:Mm9::chr6:30619311..30619322,-#_13c60bd72679013c674fc169bfafd9c6p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr6:30620092..30620097,+#_13c60bd72679013c674fc169bfafd9c6p@chr6:30620092..30620097, +
3.07e-86FFCP PHASE1:Mm9::chr4:151450310..151450318,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr19:23001562..23001563,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:23001562..23001563, +
3.07e-86FFCP PHASE1:Mm9::chr9:42147036..42147053,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42147036..42147053, -
3.07e-86FFCP PHASE1:Mm9::chr17:34752992..34753001,-#_13c60bd72679013c674fc169bfafd9c6p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr10:97112452..97112459,+#_13c60bd72679013c674fc169bfafd9c6p@chr10:97112452..97112459, +
3.07e-86FFCP PHASE2:Mm9::chr5:92800735..92800736,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:92800735..92800736, +
3.07e-86FFCP PHASE1:Mm9::chr5:113939919..113939925,+#_13c60bd72679013c674fc169bfafd9c6p@chr5:113939919..113939925, +
3.07e-86FFCP PHASE1:Mm9::chr14:48406009..48406013,+#_13c60bd72679013c674fc169bfafd9c6p@chr14:48406009..48406013, +
3.07e-86FFCP PHASE2:Mm9::chr17:34752992..34753001,-#_13c60bd72679013c674fc169bfafd9c6p5@Egfl8
3.07e-86FFCP PHASE1:Mm9::chr14:102291551..102291553,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291551..102291553, -
3.07e-86FFCP PHASE1:Mm9::chr6:30619311..30619322,-#_13c60bd72679013c674fc169bfafd9c6p16@Tsga14
3.07e-86FFCP PHASE1:Mm9::chr15:55289275..55289297,+#_13c60bd72679013c674fc169bfafd9c6p@chr15:55289275..55289297, +
3.07e-86FFCP PHASE2:Mm9::chr10:97109619..97109632,+#_13c60bd72679013c674fc169bfafd9c6p5@Epyc
3.07e-86FFCP PHASE2:Mm9::chr14:102291443..102291451,-#_13c60bd72679013c674fc169bfafd9c6p@chr14:102291443..102291451, -
3.07e-86FFCP PHASE1:Mm9::chr19:55269566..55269577,-#_13c60bd72679013c674fc169bfafd9c6p@chr19:55269566..55269577, -
3.07e-86FFCP PHASE1:Mm9::chr10:107349495..107349500,-#_13c60bd72679013c674fc169bfafd9c6p6@Otogl
3.07e-86FFCP PHASE2:Mm9::chr19:55270369..55270394,+#_13c60bd72679013c674fc169bfafd9c6p@chr19:55270369..55270394, +
3.07e-86FFCP PHASE2:Mm9::chr7:128226917..128226918,+#_13c60bd72679013c674fc169bfafd9c6p2@Otoa
3.07e-86FFCP PHASE1:Mm9::chr4:151450365..151450374,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450365..151450374, +
3.07e-86FFCP PHASE1:Mm9::chr9:42207838..42207847,-#_13c60bd72679013c674fc169bfafd9c6p14@Tecta
3.07e-86FFCP PHASE2:Mm9::chr4:151450310..151450318,+#_13c60bd72679013c674fc169bfafd9c6p@chr4:151450310..151450318, +
3.07e-86FFCP PHASE1:Mm9::chr9:42202683..42202684,-#_13c60bd72679013c674fc169bfafd9c6p@chr9:42202683..42202684, -
2.74e-44FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr7:27964761..27964768, +
2.74e-44FFCP PHASE2:Mm9::chr8:89252614..89252625,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr8:89252614..89252625, -
2.74e-44FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr4:101908153..101908163, +
2.74e-44FFCP PHASE1:Mm9::chr8:89252614..89252625,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr8:89252614..89252625, -
2.74e-44FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_070c3f4c1f160b92ec7dc4b69cec2343p7@Tecta
2.74e-44FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_070c3f4c1f160b92ec7dc4b69cec2343p1@Otogl
2.74e-44FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_070c3f4c1f160b92ec7dc4b69cec2343p6@Tecta
2.74e-44FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr1:43454162..43454170, -
2.74e-44FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_070c3f4c1f160b92ec7dc4b69cec2343p7@Glt25d2
2.74e-44FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_070c3f4c1f160b92ec7dc4b69cec2343p1@Tectb
2.74e-44FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr10:108316802..108316807, -
2.74e-44FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr12:77084875..77084885, +
2.74e-44FFCP PHASE2:Mm9::chr9:86693712..86693719,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr9:86693712..86693719, -
2.74e-44FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_070c3f4c1f160b92ec7dc4b69cec2343p11@Tsga14
2.74e-44FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr15:58022966..58022995, -
2.74e-44FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr9:42207397..42207408, -
2.74e-44FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_070c3f4c1f160b92ec7dc4b69cec2343p1@Otog
2.74e-44FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_070c3f4c1f160b92ec7dc4b69cec2343p5@Tecta
2.74e-44FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_070c3f4c1f160b92ec7dc4b69cec2343p3@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chrX:82018139..82018149,+#_070c3f4c1f160b92ec7dc4b69cec2343p28@Dmd
2.74e-44FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr3:81012915..81012923, +
2.74e-44FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_070c3f4c1f160b92ec7dc4b69cec2343p@chr3:35012397..35012405, +
2.74e-44FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_070c3f4c1f160b92ec7dc4b69cec2343p@chr9:42206784..42206793, -
2.74e-44FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_070c3f4c1f160b92ec7dc4b69cec2343p6@Jag1
2.74e-44FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_070c3f4c1f160b92ec7dc4b69cec2343p2@Tecta
2.74e-44FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_070c3f4c1f160b92ec7dc4b69cec2343p13@Tsga14

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