FFCP PHASE1:Hg19::chr19:52800410..52800454,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:52800410..52800454,+
|short_description=p1@ZNF480
|description=CAGE_peak_1_at_ZNF480_5end
|association_with_transcript=0bp_to_ENST00000334564,ENST00000354...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147657 | |EntrezGene=147657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23305 | |HGNC=23305 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEZ9,Q8WV37,C9IZQ0,Q7Z2X8 | |UniProt=F8WEZ9,Q8WV37,C9IZQ0,Q7Z2X8 | ||
|association_with_transcript=0bp_to_ENST00000334564,ENST00000354515,ENST00000468240,ENST00000490272,NM_144684,uc002pyv.2,uc010epn.2,uc010ydl.1,uc010ydm.1_5end | |||
|cluster_id=chr19:52800410..52800454,+ | |||
|description=CAGE_peak_1_at_ZNF480_5end | |||
|id=chr19:52800410..52800454,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.25e-09!24;CL:0000826!6.25e-09!24;CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53;CL:0000838!3.16e-07!52;CL:0000236!4.26e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.51e-09;24!CL:0000236;9.99e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.06e-09,24;CL:0000826,6.06e-09,24;CL:0000542,9.81e-08,53;CL:0000051,9.81e-08,53;CL:0000838,2.81e-07,52;CL:0000236,4.16e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.47e-20!235;DOID:14566!3.72e-19!239;DOID:0050687!2.81e-12!143;DOID:8692!2.83e-12!31;DOID:1240!3.79e-12!39;DOID:0050686!3.93e-12!137;DOID:2531!1.19e-10!51;DOID:0060083!1.19e-10!51;DOID:305!5.83e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.53e-12;31!DOID:1240;4.24e-10;39!DOID:2531;5.12e-07;51!DOID:0060083;5.12e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.32e-20,235;DOID:14566,3.20e-19,239;DOID:8692,2.71e-12,31;DOID:0050686,3.02e-12,137;DOID:0050687,3.04e-12,143;DOID:1240,3.67e-12,39;DOID:2531,1.02e-10,51;DOID:0060083,1.02e-10,51;DOID:305,5.75e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ZNF480 | |||
}} | }} |
Latest revision as of 17:22, 19 September 2015
Short description: | p1@ZNF480 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF480_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334564, ENST00000354515, ENST00000468240, ENST00000490272, NM_144684, uc002pyv.2, uc010epn.2, uc010ydl.1, uc010ydm.1_5end |
EntrezGene: | ZNF480 |
HGNC: | 23305 |
UniProt: | F8WEZ9Q8WV37C9IZQ0Q7Z2X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.06e-09 | 24 |
pro-B cell | 6.06e-09 | 24 |
lymphocyte | 9.81e-08 | 53 |
common lymphoid progenitor | 9.81e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.81e-07 | 52 |
B cell | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.32e-20 | 235 |
disease of cellular proliferation | 3.20e-19 | 239 |
myeloid leukemia | 2.71e-12 | 31 |
organ system cancer | 3.02e-12 | 137 |
cell type cancer | 3.04e-12 | 143 |
leukemia | 3.67e-12 | 39 |
hematologic cancer | 1.02e-10 | 51 |
immune system cancer | 1.02e-10 | 51 |
carcinoma | 5.75e-09 | 106 |