DOID:0060100: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=lschriml | |created_by=lschriml | ||
| | |def="An organ system cancer located_in the muscular and skeltal organs and characterized by uncontrolled cellular proliferation of the musculoskeletal organs." [url:http://en.wikipedia.org/wiki/Musculoskeletal_system#Diseases_and_disorders] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:0060100 | |||
|is_a=DOID:0050686 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=musculoskeletal system cancer | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-07-15T02:30:51Z | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:48, 12 September 2014
| Name: | musculoskeletal system cancer |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An organ system cancer located_in the muscular and skeltal organs and characterized by uncontrolled cellular proliferation of the musculoskeletal organs." [url:http://en.wikipedia.org/wiki/Musculoskeletal_system#Diseases_and_disorders] |
| Created by: | lschriml |
| Creation date: | 2011-07-15T02:30:51Z |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0050686(organ system cancer) |
|---|
Children
| is a: | DOID:0060124 (skeletal system cancer),DOID:201 (connective tissue cancer),DOID:4045 (muscle cancer) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10510-107D6 (osteosarcoma cell line:143B/TK^(-)neo^(R))
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10720-109I9
- 10722-110A2 (leiomyosarcoma cell line:Hs 5.T)
- 10731-110B2
- 10734-110B5
... further results Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10510-107D6 (osteosarcoma cell line:143B/TK^(-)neo^(R))
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10720-109I9
- 10722-110A2 (leiomyosarcoma cell line:Hs 5.T)
- 10731-110B2
- 10734-110B5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060100 (musculoskeletal system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr1:180919481..180919491,-#_8adaab70658388b16170ca9a132102d5 | p4@Smyd3 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr1:180919481..180919491,-#_8adaab70658388b16170ca9a132102d5 | p4@Smyd3 |
| 6.04e-65 | FFCP PHASE1:Mm9::chr12:32681792..32681797,-#_70f1397c001c45dbb9de9ecbb15f2c98 | p@chr12:32681792..32681797, - |
| 6.04e-65 | FFCP PHASE2:Mm9::chr10:94309614..94309618,+#_70f1397c001c45dbb9de9ecbb15f2c98 | p@chr10:94309614..94309618, + |
| 6.04e-65 | FFCP PHASE1:Mm9::chr10:94309614..94309618,+#_70f1397c001c45dbb9de9ecbb15f2c98 | p@chr10:94309614..94309618, + |
| 6.04e-65 | FFCP PHASE2:Mm9::chr12:32681792..32681797,-#_70f1397c001c45dbb9de9ecbb15f2c98 | p@chr12:32681792..32681797, - |
| 1.1e-52 | FFCP PHASE1:Mm9::chr18:42389517..42389526,-#_f9956c921ac7e5e607b07e9666c603b4 | p@chr18:42389517..42389526, - |
| 1.1e-52 | FFCP PHASE2:Mm9::chr18:42389517..42389526,-#_f9956c921ac7e5e607b07e9666c603b4 | p@chr18:42389517..42389526, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr17:18027312..18027316,+#_17a212d7b3b6e250de2627a0a68aff12 | p@chr17:18027312..18027316, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr1:93945098..93945105,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr1:93945098..93945105, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr2:65027620..65027631,+#_17a212d7b3b6e250de2627a0a68aff12 | p@chr2:65027620..65027631, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr17:18027312..18027316,+#_17a212d7b3b6e250de2627a0a68aff12 | p@chr17:18027312..18027316, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr17:73986396..73986402,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr17:73986396..73986402, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr1:93945098..93945105,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr1:93945098..93945105, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr2:65027620..65027631,+#_17a212d7b3b6e250de2627a0a68aff12 | p@chr2:65027620..65027631, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr12:109999540..109999552,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr12:109999540..109999552, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr4:95407927..95407931,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr4:95407927..95407931, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr12:109999540..109999552,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr12:109999540..109999552, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr4:95407927..95407931,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr4:95407927..95407931, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr17:73986396..73986402,-#_17a212d7b3b6e250de2627a0a68aff12 | p@chr17:73986396..73986402, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr19:21545650..21545664,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr19:21545650..21545664, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr10:84019204..84019209,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr10:84019204..84019209, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr9:96519592..96519622,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr9:96519592..96519622, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr3:51015481..51015493,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr3:51015481..51015493, - |
| 2.47e-52 | FFCP PHASE2:Mm9::chr5:91125117..91125120,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr5:91125117..91125120, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr5:91125117..91125120,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr5:91125117..91125120, - |
| 2.47e-52 | FFCP PHASE2:Mm9::chr14:34007222..34007226,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr14:34007222..34007226, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr3:51015481..51015493,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr3:51015481..51015493, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr14:34007222..34007226,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr14:34007222..34007226, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr10:84019204..84019209,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr10:84019204..84019209, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr19:21545650..21545664,-#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr19:21545650..21545664, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr9:96519592..96519622,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr9:96519592..96519622, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr17:48322531..48322538,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr17:48322531..48322538, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr17:48322531..48322538,+#_c27bcdf4ec0ac2b792aecbe0679712de | p@chr17:48322531..48322538, + |
| 3.69e-52 | FFCP PHASE2:Mm9::chr17:70883915..70883925,+#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr17:70883915..70883925, + |
| 3.69e-52 | FFCP PHASE1:Mm9::chr17:70883915..70883925,+#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr17:70883915..70883925, + |
| 3.69e-52 | FFCP PHASE2:Mm9::chr10:4797822..4797824,-#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr10:4797822..4797824, - |
| 3.69e-52 | FFCP PHASE1:Mm9::chr10:4797822..4797824,-#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr10:4797822..4797824, - |
| 3.69e-52 | FFCP PHASE2:Mm9::chr13:83089547..83089553,-#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr13:83089547..83089553, - |
| 3.69e-52 | FFCP PHASE1:Mm9::chr13:83089547..83089553,-#_9ecb0cd683c5dc0d9476e8f25b302fac | p@chr13:83089547..83089553, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr7:75278691..75278698,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr7:75278691..75278698, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr3:51015411..51015416,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr3:51015411..51015416, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr8:109293163..109293169,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr8:109293163..109293169, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr2:134314492..134314494,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr2:134314492..134314494, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr19:24603529..24603552,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr19:24603529..24603552, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr18:56664094..56664101,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr18:56664094..56664101, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr13:55997174..55997188,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr13:55997174..55997188, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr7:108511327..108511332,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr7:108511327..108511332, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr7:75278691..75278698,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr7:75278691..75278698, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr8:124094361..124094366,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr8:124094361..124094366, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr1:93945286..93945297,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr1:93945286..93945297, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr2:134314492..134314494,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr2:134314492..134314494, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr5:54445170..54445183,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr5:54445170..54445183, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr1:182778780..182778789,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr1:182778780..182778789, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr3:51015411..51015416,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr3:51015411..51015416, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr19:24603529..24603552,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr19:24603529..24603552, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr5:54445170..54445183,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr5:54445170..54445183, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr1:93945286..93945297,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr1:93945286..93945297, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr1:182778780..182778789,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr1:182778780..182778789, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr13:55997174..55997188,+#_fa25c57217a4869499ce68f77e85bc9e | p@chr13:55997174..55997188, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr18:56664094..56664101,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr18:56664094..56664101, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr6:88787436..88787445,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr6:88787436..88787445, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr8:109293163..109293169,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr8:109293163..109293169, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr7:108511327..108511332,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr7:108511327..108511332, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr6:88787436..88787445,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr6:88787436..88787445, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr8:124094361..124094366,-#_fa25c57217a4869499ce68f77e85bc9e | p@chr8:124094361..124094366, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr10:12649672..12649677,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr10:12649672..12649677, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr11:70250817..70250828,+#_132cdd6cfe224955e4c31f91c9d51651 | p8@Arrb2 |
| 1.18e-44 | FFCP PHASE1:Mm9::chrX:45628107..45628118,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chrX:45628107..45628118, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr5:150046846..150046863,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr5:150046846..150046863, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr5:150046846..150046863,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr5:150046846..150046863, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:122388084..122388093,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr2:122388084..122388093, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr11:70250817..70250828,+#_132cdd6cfe224955e4c31f91c9d51651 | p8@Arrb2 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr8:59915282..59915287,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr8:59915282..59915287, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:152521243..152521254,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr2:152521243..152521254, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:122388084..122388093,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr2:122388084..122388093, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr5:150056307..150056318,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr5:150056307..150056318, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:152521243..152521254,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr2:152521243..152521254, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr10:12649672..12649677,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr10:12649672..12649677, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chrX:45628107..45628118,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chrX:45628107..45628118, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr5:150056307..150056318,-#_132cdd6cfe224955e4c31f91c9d51651 | p@chr5:150056307..150056318, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr13:55629806..55629810,-#_132cdd6cfe224955e4c31f91c9d51651 | p3@Dok3 |
| 1.18e-44 | FFCP PHASE2:Mm9::chr13:55629806..55629810,-#_132cdd6cfe224955e4c31f91c9d51651 | p3@Dok3 |
| 1.18e-44 | FFCP PHASE2:Mm9::chr8:59915282..59915287,+#_132cdd6cfe224955e4c31f91c9d51651 | p@chr8:59915282..59915287, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr7:148203451..148203468,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr7:148203451..148203468, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr7:148203451..148203468,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr7:148203451..148203468, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr13:41703140..41703184,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr13:41703140..41703184, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr2:157619996..157620003,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr2:157619996..157620003, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr14:79050736..79050745,+#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr14:79050736..79050745, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr13:41703140..41703184,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr13:41703140..41703184, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr2:157619996..157620003,-#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr2:157619996..157620003, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr14:79050736..79050745,+#_f2851acdbf3eb0b7b92a238b7af66f80 | p@chr14:79050736..79050745, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr14:61928697..61928708,+#_d2f4bb10377a8c04899dc8e004642a98 | p3@Arl11 |
| 2.33e-44 | FFCP PHASE2:Mm9::chr17:29773950..29773992,+#_d2f4bb10377a8c04899dc8e004642a98 | p@chr17:29773950..29773992, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr14:61928697..61928708,+#_d2f4bb10377a8c04899dc8e004642a98 | p3@Arl11 |
| 2.33e-44 | FFCP PHASE1:Mm9::chr17:29773950..29773992,+#_d2f4bb10377a8c04899dc8e004642a98 | p@chr17:29773950..29773992, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr4:46178925..46178936,+#_d2f4bb10377a8c04899dc8e004642a98 | p@chr4:46178925..46178936, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr10:7382593..7382598,+#_d2f4bb10377a8c04899dc8e004642a98 | p@chr10:7382593..7382598, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr4:46178925..46178936,+#_d2f4bb10377a8c04899dc8e004642a98 | p@chr4:46178925..46178936, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr2:167402678..167402682,-#_d2f4bb10377a8c04899dc8e004642a98 | p@chr2:167402678..167402682, - |
