FFCP PHASE1:Hg19::chr19:5434724..5434729,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:5434724..5434729,-
|short_description=p@chr19:5434724..5434729,-
|description=CAGE_peak_at_chr19:5434724..5434729,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5434724..5434729,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr19:5434724..5434729,- | |||
|id=chr19:5434724..5434729,- | |||
|ontology_enrichment_celltype=CL:0000817!8.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.48e-10;2!CL:0000137;2.48e-10;2!CL:0000092;2.48e-10;2!CL:0000243;3.66e-10;15!CL:0000125;3.66e-10;15!CL:0000095;3.72e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2;CL:0000243,3.55e-10,15;CL:0000125,3.55e-10,15;CL:0000030,3.55e-10,15;CL:0000339,3.55e-10,15;CL:0000095,3.62e-09,17;CL:0000123,3.62e-09,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.37e-15;10!CL:0000339;3.66e-10;15!UBERON:0003056;2.63e-07;3!UBERON:0009847;2.63e-07;3!UBERON:0003353;2.63e-07;3 | |||
|ontology_enrichment_disease=DOID:162!9.50e-21!235;DOID:14566!6.01e-20!239;DOID:0050686!3.31e-12!137;DOID:0050687!4.96e-11!143;DOID:1749!2.90e-10!14;DOID:2531!1.50e-09!51;DOID:0060083!1.50e-09!51;DOID:1036!1.53e-09!8;DOID:305!1.66e-08!106;DOID:7!4.32e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.71e-19;1!DOID:3165;2.71e-19;1!DOID:0060121;2.71e-19;1!DOID:2438;2.71e-19;1!DOID:4418;2.71e-19;1!DOID:9119;2.71e-19;1!DOID:3093;3.95e-14;11!DOID:200;2.48e-10;2!DOID:4305;2.48e-10;2!DOID:1036;3.52e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.30e-19,1;DOID:0060085,3.25e-19,1;DOID:3165,3.25e-19,1;DOID:0060121,3.25e-19,1;DOID:2438,3.25e-19,1;DOID:4418,3.25e-19,1;DOID:3093,3.77e-14,11;DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2;DOID:1036,3.52e-10,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr19:5434724..5434729,- | |||
}} | }} |
Latest revision as of 17:01, 27 July 2015
Short description: | p@chr19:5434724..5434729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5434724..5434729, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
glial cell (sensu Vertebrata) | 3.55e-10 | 15 |
glial cell | 3.55e-10 | 15 |
glioblast | 3.55e-10 | 15 |
glioblast (sensu Vertebrata) | 3.55e-10 | 15 |
neuron associated cell | 3.62e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.62e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.30e-19 | 1 |
organ system benign neoplasm | 3.25e-19 | 1 |
skin benign neoplasm | 3.25e-19 | 1 |
integumentary system benign neoplasm | 3.25e-19 | 1 |
dermis tumor | 3.25e-19 | 1 |
cutaneous fibrous histiocytoma | 3.25e-19 | 1 |
nervous system cancer | 3.77e-14 | 11 |
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |
chronic leukemia | 3.52e-10 | 8 |