UBERON:0007297: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007297 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=presumptive pronephric mesoderm | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="nephron primordium" EXACT [ZFA:0001070] | ||
|union_of= | |||
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | presumptive pronephric mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "nephron primordium" EXACT [ZFA:0001070] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|
Children
| develops from: | UBERON:0005721 (pronephric mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:25565920..25565950,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr7:25565920..25565950, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155722..90155743, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21378927..21378932, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Ntsr2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:17224952..17224968, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr4:138824620..138824627, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:160347529..160347538, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Ido1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p15@Wars |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155722..90155743, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:63779573..63779582, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:25706249..25706254, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379430..21379437, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:65941913..65941923, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:54678902..54678911, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26688157..26688159, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr4:106731469..106731481, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:164479326..164479336, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:160573108..160573123, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:156776465..156776473,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:156776465..156776473, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:75798114..75798125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p1@Defb44-ps |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:96150839..96150842, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:110773718..110773729, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:75329148..75329155, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26688157..26688159, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:89597818..89597827,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:89597818..89597827, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p1@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p5@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:34107562..34107572, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Atp4a |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:87936238..87936249, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:63611214..63611229, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:22547027..22547063, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379306..21379315, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p15@Pgap2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:75798157..75798162, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:130496372..130496393, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:23308182..23308185, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:77645280..77645295, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:148625223..148625234, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379486..31379501, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:160573108..160573123, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379372..21379404, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:23045782..23045791, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:34107586..34107593, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379159..21379162, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p17@Capn5 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:31379845..31379855, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:24270118..24270122, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr10:116399500..116399516, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p9@Tecta |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:50280199..50280211, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:91107095..91107103, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:88272459..88272484, - |
