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{{CL
{{CL
|id=CL:0000625
|alt_id=
|name=CD8-positive, alpha-beta T cell
|namespace=cell;;efo
|def="A T cell expressing an alpha-beta T cell receptor and the CD8 coreceptor." [GOC:add, GOC:tfm, ISBN:0781735149]
|xref=
|is_a=CL:0000791
|synonym="CD8-positive, alpha-beta T lymphocyte" EXACT [];;"CD8-positive, alpha-beta T-cell" EXACT [];;"CD8-positive, alpha-beta T-lymphocyte" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A T cell expressing an alpha-beta T cell receptor and the CD8 coreceptor." [GOC:add, GOC:tfm, ISBN:0781735149]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000625
|is_a=CL:0000791
|is_obsolete=
|located_in=
|located_in=
|name=CD8-positive, alpha-beta T cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="CD8-positive, alpha-beta T lymphocyte" EXACT [];;"CD8-positive, alpha-beta T-cell" EXACT [];;"CD8-positive, alpha-beta T-lymphocyte" EXACT []
|union_of=
|xref=
}}
}}

Latest revision as of 16:35, 12 September 2014

Name:CD8-positive, alpha-beta T cell
Namespace:FANTOM
Definition:"A T cell expressing an alpha-beta T cell receptor and the CD8 coreceptor." [GOC:add, GOC:tfm, ISBN:0781735149]
Synonyms: "CD8-positive, alpha-beta T lymphocyte" EXACT []
"CD8-positive, alpha-beta T-cell" EXACT []
"CD8-positive, alpha-beta T-lymphocyte" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000791(mature alpha-beta T cell)



Children


disjoint from:CL:0000624 (CD4-positive, alpha-beta T cell)
derives from:FF:0000030 (CD8-positive T cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000625 (CD8-positive, alpha-beta T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.7e-137FFCP PHASE1:Hg19::chr2:87053288..87053295,-#_7ac30c441e2df95da44bcec53a2a933cp@chr2:87053288..87053295, -
2.7e-137FFCP PHASE2:Hg19::chr2:87053288..87053295,-#_7ac30c441e2df95da44bcec53a2a933cp@chr2:87053288..87053295, -
3.11e-137FFCP PHASE1:Hg19::chr6:128299606..128299618,+#_b719999c57ab8645be360c471aa2b7c7p@chr6:128299606..128299618, +
3.11e-137FFCP PHASE1:Hg19::chr11:122709344..122709378,+#_b719999c57ab8645be360c471aa2b7c7p@chr11:122709344..122709378, +
3.11e-137FFCP PHASE2:Hg19::chr11:122709344..122709378,+#_b719999c57ab8645be360c471aa2b7c7p@chr11:122709344..122709378, +
3.11e-137FFCP PHASE2:Hg19::chr6:128299606..128299618,+#_b719999c57ab8645be360c471aa2b7c7p@chr6:128299606..128299618, +
5.61e-135FFCP PHASE2:Hg19::chr12:10561626..10561641,-#_cf75ac7c0185b3a0b4b53d945aeccba3p@chr12:10561626..10561641, -
5.61e-135FFCP PHASE1:Hg19::chr12:10561626..10561641,-#_cf75ac7c0185b3a0b4b53d945aeccba3p@chr12:10561626..10561641, -
3.14e-109FFCP PHASE2:Hg19::chr2:107103805..107103824,+#_c402994f41084a934f25ffdf6fa42ed3p1@ENST00000303432, p1@ENST00000446559
3.14e-109FFCP PHASE1:Hg19::chr2:107103805..107103824,+#_c402994f41084a934f25ffdf6fa42ed3p1@ENST00000303432, p1@ENST00000446559
5.29e-105FFCP PHASE2:Hg19::chr19:30101122..30101134,+#_3f6a2ec1e24890d4d7c4397b8ce8a3a2p@chr19:30101122..30101134, +
5.29e-105FFCP PHASE1:Hg19::chr19:30101122..30101134,+#_3f6a2ec1e24890d4d7c4397b8ce8a3a2p@chr19:30101122..30101134, +
4.54e-103FFCP PHASE2:Hg19::chr2:87016482..87016502,-#_f5fbbdd9193f49240c12c5f99f9d26b6p@chr2:87016482..87016502, -
4.54e-103FFCP PHASE1:Hg19::chr2:87016482..87016502,-#_f5fbbdd9193f49240c12c5f99f9d26b6p@chr2:87016482..87016502, -
2.0e-99FFCP PHASE2:Hg19::chr6:112115162..112115173,-#_141f80606a1b59ef394d9016d0a77bcap20@FYN
2.0e-99FFCP PHASE1:Hg19::chr6:112115162..112115173,-#_141f80606a1b59ef394d9016d0a77bcap20@FYN
7.88e-97FFCP PHASE1:Hg19::chr2:87036803..87036819,+#_1dc9285c539a2ea01c95c0e9e78a794cp@chr2:87036803..87036819, +
7.88e-97FFCP PHASE2:Hg19::chr2:87036803..87036819,+#_1dc9285c539a2ea01c95c0e9e78a794cp@chr2:87036803..87036819, +
9.54e-96FFCP PHASE2:Hg19::chr2:87053338..87053349,-#_e8933279a8a6da5c757242cd51a0e0ebp@chr2:87053338..87053349, -
9.54e-96FFCP PHASE1:Hg19::chr2:87053338..87053349,-#_e8933279a8a6da5c757242cd51a0e0ebp@chr2:87053338..87053349, -
1.77e-94FFCP PHASE2:Hg19::chr2:87017652..87017670,-#_a767872230f9b9b71d15dd7a7d6e8f3cp@chr2:87017652..87017670, -
1.77e-94FFCP PHASE1:Hg19::chr2:87017652..87017670,-#_a767872230f9b9b71d15dd7a7d6e8f3cp@chr2:87017652..87017670, -
7.78e-92FFCP PHASE1:Hg19::chr6:128299556..128299563,+#_00455557450e9c37027fdee8057e1b02p@chr6:128299556..128299563, +
7.78e-92FFCP PHASE2:Hg19::chr6:128299556..128299563,+#_00455557450e9c37027fdee8057e1b02p@chr6:128299556..128299563, +
1.4e-91FFCP PHASE1:Hg19::chr22:23101972..23101984,-#_0a5b32decc3ed9dec056e74f35bd82edp@chr22:23101972..23101984, -
1.4e-91FFCP PHASE2:Hg19::chr22:23101972..23101984,-#_0a5b32decc3ed9dec056e74f35bd82edp@chr22:23101972..23101984, -
3.64e-90FFCP PHASE2:Hg19::chr15:44968000..44968011,-#_f070610f6baddb55ce84657b222ede20p7@PATL2
3.64e-90FFCP PHASE1:Hg19::chr15:44968000..44968011,-#_f070610f6baddb55ce84657b222ede20p7@PATL2
1.93e-89FFCP PHASE2:Hg19::chr11:2320600..2320611,+#_b1c8ae06f017c00973587beb7d6e8310p@chr11:2320600..2320611, +
1.93e-89FFCP PHASE1:Hg19::chr11:2320600..2320611,+#_b1c8ae06f017c00973587beb7d6e8310p@chr11:2320600..2320611, +
1.93e-89FFCP PHASE1:Hg19::chr2:107103861..107103870,+#_b1c8ae06f017c00973587beb7d6e8310p1@ENST00000417670
1.93e-89FFCP PHASE2:Hg19::chr2:107103861..107103870,+#_b1c8ae06f017c00973587beb7d6e8310p1@ENST00000417670
1.67e-88FFCP PHASE2:Hg19::chr17:2597530..2597548,-#_477bb6073e026027c9608d304927c02dp10@KIAA0664
1.67e-88FFCP PHASE1:Hg19::chr17:2597530..2597548,-#_477bb6073e026027c9608d304927c02dp10@KIAA0664
2.51e-88FFCP PHASE2:Hg19::chr2:87012395..87012400,-#_33b790d5f9d196780dea893f739445ccp@chr2:87012395..87012400, -
2.51e-88FFCP PHASE1:Hg19::chr2:87012395..87012400,-#_33b790d5f9d196780dea893f739445ccp@chr2:87012395..87012400, -
3.53e-88FFCP PHASE2:Hg19::chr7:38370595..38370606,-#_3b5dde25d5487f203a8f23036090271ap2@uc010kxj.1
3.53e-88FFCP PHASE1:Hg19::chr7:38370595..38370606,-#_3b5dde25d5487f203a8f23036090271ap2@uc010kxj.1
1.09e-87FFCP PHASE1:Hg19::chr12:10563996..10564002,-#_e277086a00cd52c85af54bfdb4497d0dp@chr12:10563996..10564002, -
1.09e-87FFCP PHASE2:Hg19::chr12:10563996..10564002,-#_e277086a00cd52c85af54bfdb4497d0dp@chr12:10563996..10564002, -
1.96e-86FFCP PHASE2:Hg19::chr5:35859622..35859626,+#_d4f6073b7be3f176f2e0a0bfc96e35fap@chr5:35859622..35859626, +
1.96e-86FFCP PHASE1:Hg19::chr5:35859622..35859626,+#_d4f6073b7be3f176f2e0a0bfc96e35fap@chr5:35859622..35859626, +
3.07e-86FFCP PHASE2:Mm9::chr1:52234220..52234222,+#_24def9c5d5bac93a144aefae263b33b2p@chr1:52234220..52234222, +
3.07e-86FFCP PHASE1:Mm9::chr1:52234220..52234222,+#_24def9c5d5bac93a144aefae263b33b2p@chr1:52234220..52234222, +
3.07e-86FFCP PHASE2:Mm9::chr5:67818825..67818832,-#_24def9c5d5bac93a144aefae263b33b2p9@Bend4
3.07e-86FFCP PHASE1:Mm9::chr5:67818825..67818832,-#_24def9c5d5bac93a144aefae263b33b2p9@Bend4
6.42e-86FFCP PHASE2:Hg19::chr11:2320635..2320646,+#_ddc35828ff8ec1be1470497121c5bc40p@chr11:2320635..2320646, +
6.42e-86FFCP PHASE1:Hg19::chr11:2320635..2320646,+#_ddc35828ff8ec1be1470497121c5bc40p@chr11:2320635..2320646, +
4.04e-82FFCP PHASE2:Hg19::chr12:10752214..10752231,-#_a7714e3b4c85322ba5741d516d1fd3c7p1@ENST00000521068
4.04e-82FFCP PHASE1:Hg19::chr12:10752214..10752231,-#_a7714e3b4c85322ba5741d516d1fd3c7p1@ENST00000521068
8.74e-82FFCP PHASE2:Hg19::chr8:1806877..1806888,+#_48529751457fdbb7d10d530205019ed3p4@ARHGEF10
8.74e-82FFCP PHASE1:Hg19::chr8:1806877..1806888,+#_48529751457fdbb7d10d530205019ed3p4@ARHGEF10
3.56e-80FFCP PHASE1:Hg19::chr19:51875523..51875549,-#_1c6b32abdf281686486e6c8c4fb89372p@chr19:51875523..51875549, -
3.56e-80FFCP PHASE2:Hg19::chr19:51875523..51875549,-#_1c6b32abdf281686486e6c8c4fb89372p@chr19:51875523..51875549, -
5.19e-80FFCP PHASE2:Hg19::chr14:102180126..102180136,+#_4029a0e0b0aa4bf11ccc92623c8b159bp@chr14:102180126..102180136, +
5.19e-80FFCP PHASE1:Hg19::chr14:102180126..102180136,+#_4029a0e0b0aa4bf11ccc92623c8b159bp@chr14:102180126..102180136, +
2.7e-79FFCP PHASE2:Hg19::chr7:38403275..38403280,-#_0594e28f536e44ed5452cd52e5bf997fp2@TRGV2
2.7e-79FFCP PHASE1:Hg19::chr7:38403275..38403280,-#_0594e28f536e44ed5452cd52e5bf997fp2@TRGV2
9.2e-78FFCP PHASE2:Hg19::chr4:103551892..103551903,-#_3d6ad27a28f819a667fb37b31c1549b6p@chr4:103551892..103551903, -
9.2e-78FFCP PHASE1:Hg19::chr4:103551892..103551903,-#_3d6ad27a28f819a667fb37b31c1549b6p@chr4:103551892..103551903, -
1.49e-77FFCP PHASE2:Hg19::chr12:10548079..10548109,-#_738793da40e9803819618767dff1c3c2p@chr12:10548079..10548109, -
1.49e-77FFCP PHASE1:Hg19::chr12:10548079..10548109,-#_738793da40e9803819618767dff1c3c2p@chr12:10548079..10548109, -
4.25e-77FFCP PHASE2:Hg19::chr17:61517622..61517633,-#_e8bcbbfd2e265af5820a77c2abab2607p@chr17:61517622..61517633, -
4.25e-77FFCP PHASE1:Hg19::chr17:61517622..61517633,-#_e8bcbbfd2e265af5820a77c2abab2607p@chr17:61517622..61517633, -
7.19e-77FFCP PHASE2:Hg19::chr12:6884195..6884206,+#_2216abe6def7f1f784348400359a01d0p5@LAG3
7.19e-77FFCP PHASE1:Hg19::chr12:6884195..6884206,+#_2216abe6def7f1f784348400359a01d0p5@LAG3
3.18e-76FFCP PHASE2:Hg19::chr21:47844888..47844896,+#_5a8949b53d09b14e1cd3bd06e99f40d0p@chr21:47844888..47844896, +
3.18e-76FFCP PHASE1:Hg19::chr21:47844888..47844896,+#_5a8949b53d09b14e1cd3bd06e99f40d0p@chr21:47844888..47844896, +
1.32e-75FFCP PHASE1:Hg19::chr16:57162957..57162973,+#_7fb3cc9c51eb368341e939e1ebeaeaffp@chr16:57162957..57162973, +
1.32e-75FFCP PHASE2:Hg19::chr16:57162957..57162973,+#_7fb3cc9c51eb368341e939e1ebeaeaffp@chr16:57162957..57162973, +
1.6e-74FFCP PHASE2:Hg19::chr2:87053149..87053161,-#_d7e3c736fb0e650b9de5440401000ad3p@chr2:87053149..87053161, -
1.6e-74FFCP PHASE1:Hg19::chr2:87053149..87053161,-#_d7e3c736fb0e650b9de5440401000ad3p@chr2:87053149..87053161, -
2.41e-74FFCP PHASE2:Hg19::chr12:10548110..10548127,-#_dcd5924d9633fa5b50c61c177cefa1c4p@chr12:10548110..10548127, -
2.41e-74FFCP PHASE1:Hg19::chr12:10548110..10548127,-#_dcd5924d9633fa5b50c61c177cefa1c4p@chr12:10548110..10548127, -
8.97e-74FFCP PHASE1:Hg19::chr3:27754397..27754419,+#_90b265a1631e60aa1caa86f5b2b4f4bbp@chr3:27754397..27754419, +
8.97e-74FFCP PHASE2:Hg19::chr3:27754397..27754419,+#_90b265a1631e60aa1caa86f5b2b4f4bbp@chr3:27754397..27754419, +
2.92e-72FFCP PHASE1:Hg19::chr2:37827073..37827104,+#_48a6bf845b9ea8eed0c0a341b8de4491p3@ENST00000419425
2.92e-72FFCP PHASE2:Hg19::chr2:37827073..37827104,+#_48a6bf845b9ea8eed0c0a341b8de4491p3@ENST00000419425
3.94e-72FFCP PHASE2:Hg19::chr5:35817337..35817343,+#_2bea67903a0e7277cf6acff489df7d2dp@chr5:35817337..35817343, +
3.94e-72FFCP PHASE1:Hg19::chr5:35817337..35817343,+#_2bea67903a0e7277cf6acff489df7d2dp@chr5:35817337..35817343, +
4.51e-72FFCP PHASE1:Hg19::chr8:1806935..1806947,+#_96cf13bd64629afceb3854a683c7c32dp3@ARHGEF10
4.51e-72FFCP PHASE2:Hg19::chr8:1806935..1806947,+#_96cf13bd64629afceb3854a683c7c32dp3@ARHGEF10
4.7e-72FFCP PHASE1:Hg19::chr6:105901528..105901540,+#_1aa7166b2d9a51f6b62ac0fb689b009dp@chr6:105901528..105901540, +
4.7e-72FFCP PHASE2:Hg19::chr6:105901528..105901540,+#_1aa7166b2d9a51f6b62ac0fb689b009dp@chr6:105901528..105901540, +
4.72e-71FFCP PHASE2:Hg19::chr2:87088995..87089018,-#_a71bf3f0ef01a46c1b7e11dbded5f793p1@CD8B
4.72e-71FFCP PHASE1:Hg19::chr2:87088995..87089018,-#_a71bf3f0ef01a46c1b7e11dbded5f793p1@CD8B
1.12e-70FFCP PHASE1:Hg19::chr1:159772121..159772159,+#_5d1128a4c4e81ac1746e72385cd5375dp2@FCRL6
1.12e-70FFCP PHASE2:Hg19::chr1:159772121..159772159,+#_5d1128a4c4e81ac1746e72385cd5375dp2@FCRL6
4.02e-70FFCP PHASE2:Hg19::chr1:8986930..8986955,-#_5ae23af01ae051bd3931ab83abae4adap@chr1:8986930..8986955, -
4.02e-70FFCP PHASE1:Hg19::chr1:8986930..8986955,-#_5ae23af01ae051bd3931ab83abae4adap@chr1:8986930..8986955, -
4.32e-70FFCP PHASE2:Hg19::chr12:10562135..10562149,-#_0e3fa043fda4600bc614ec1be420d18fp1@ENST00000539300, p1@ENST00000539370
4.32e-70FFCP PHASE1:Hg19::chr12:10562135..10562149,-#_0e3fa043fda4600bc614ec1be420d18fp1@ENST00000539300, p1@ENST00000539370
4.77e-70FFCP PHASE1:Hg19::chr2:85922031..85922057,+#_a8324965f508630c691259cde5048d6dp5@GNLY
4.77e-70FFCP PHASE2:Hg19::chr2:85922031..85922057,+#_a8324965f508630c691259cde5048d6dp5@GNLY
1.06e-69FFCP PHASE2:Hg19::chr13:114920170..114920193,+#_f43da998daa3d7c821e25192745ed8e2p@chr13:114920170..114920193, +
1.06e-69FFCP PHASE1:Hg19::chr13:114920170..114920193,+#_f43da998daa3d7c821e25192745ed8e2p@chr13:114920170..114920193, +
5.65e-69FFCP PHASE2:Hg19::chr12:10725588..10725591,+#_0e027e050821ec31ea9e8ca8583ad065p@chr12:10725588..10725591, +
5.65e-69FFCP PHASE1:Hg19::chr12:10725588..10725591,+#_0e027e050821ec31ea9e8ca8583ad065p@chr12:10725588..10725591, +
8.29e-69FFCP PHASE2:Hg19::chr15:44969033..44969045,-#_c537e4a7dc0f85d5e786c03c78735ee4p4@PATL2
8.29e-69FFCP PHASE1:Hg19::chr15:44969033..44969045,-#_c537e4a7dc0f85d5e786c03c78735ee4p4@PATL2

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