Personal tools

CL:0000855: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000855
|alt_id=
|name=sensory hair cell
|namespace=cell
|def="Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [SANBI:mhl]
|xref=BTO:0004744
|is_a=CL:0000199
|synonym="hair cell" BROAD []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [SANBI:mhl]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000855
|is_a=CL:0000199
|is_obsolete=
|located_in=
|located_in=
|name=sensory hair cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="hair cell" BROAD []
|union_of=
|xref=BTO:0004744
}}
}}

Latest revision as of 16:38, 12 September 2014

Name:sensory hair cell
Namespace:FANTOM
Definition:"Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [SANBI:mhl]
Xrefs:
links:
BTO:0004744
Synonyms: "hair cell" BROAD []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000199(mechanoreceptor cell)



Children


is a:CL:0002374 (ear hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000855 (sensory hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
2.74e-44FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_3c70b699083a5138fd6e482cca9fa0abp@chr14:47293487..47293493, -
2.74e-44FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:172843847..172843880, -
2.74e-44FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_3c70b699083a5138fd6e482cca9fa0abp@chr2:73232344..73232356, -
2.74e-44FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:172843847..172843880, -
2.74e-44FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_3c70b699083a5138fd6e482cca9fa0abp@chr19:10536767..10536777, -
2.74e-44FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_3c70b699083a5138fd6e482cca9fa0abp@chr6:113251570..113251578, +
2.74e-44FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_3c70b699083a5138fd6e482cca9fa0abp@chr13:43699188..43699216, +
2.74e-44FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_3c70b699083a5138fd6e482cca9fa0abp1@Kncn
2.74e-44FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_3c70b699083a5138fd6e482cca9fa0abp1@Kcna10
2.74e-44FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_3c70b699083a5138fd6e482cca9fa0abp@chr14:47293496..47293510, -
2.74e-44FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_3c70b699083a5138fd6e482cca9fa0abp12@B3galt5
2.74e-44FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_3c70b699083a5138fd6e482cca9fa0abp@chr11:94371127..94371139, -
2.74e-44FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:94627290..94627299, -
2.74e-44FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_3c70b699083a5138fd6e482cca9fa0abp9@Otof
2.74e-44FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_3c70b699083a5138fd6e482cca9fa0abp1@Espnl
2.74e-44FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_3c70b699083a5138fd6e482cca9fa0abp1@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_3c70b699083a5138fd6e482cca9fa0abp3@Strc
2.74e-44FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_3c70b699083a5138fd6e482cca9fa0abp@chr18:81327205..81327211, +
2.74e-44FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_3c70b699083a5138fd6e482cca9fa0abp@chr18:42158627..42158630, -
2.74e-44FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_3c70b699083a5138fd6e482cca9fa0abp@chr14:20649897..20649907, +
2.74e-44FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_3c70b699083a5138fd6e482cca9fa0abp6@Fam70b
2.74e-44FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_3c70b699083a5138fd6e482cca9fa0abp3@Gipc3
2.74e-44FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_3c70b699083a5138fd6e482cca9fa0abp2@Fscn2
2.74e-44FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_3c70b699083a5138fd6e482cca9fa0abp@chr13:78257518..78257522, +
2.74e-44FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_3c70b699083a5138fd6e482cca9fa0abp7@A730017C20Rik
2.74e-44FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_3c70b699083a5138fd6e482cca9fa0abp3@Gipc3
2.74e-44FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_3c70b699083a5138fd6e482cca9fa0abp@chr18:66033526..66033539, -
2.74e-44FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_3c70b699083a5138fd6e482cca9fa0abp@chr12:109905399..109905416, +
2.74e-44FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_3c70b699083a5138fd6e482cca9fa0abp2@Tomt
2.74e-44FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_3c70b699083a5138fd6e482cca9fa0abp@chr9:50968647..50968668, -
2.74e-44FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:13983179..13983190, +
2.74e-44FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_3c70b699083a5138fd6e482cca9fa0abp@chr14:63099970..63099980, -
2.74e-44FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_3c70b699083a5138fd6e482cca9fa0abp@chrX:154140800..154140810, +
2.74e-44FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_3c70b699083a5138fd6e482cca9fa0abp@chr3:154693281..154693317, -
2.74e-44FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:27252925..27252939, +
2.74e-44FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_3c70b699083a5138fd6e482cca9fa0abp@chr6:29428397..29428407, -
2.74e-44FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_3c70b699083a5138fd6e482cca9fa0abp@chr16:93971367..93971379, -
2.74e-44FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_3c70b699083a5138fd6e482cca9fa0abp@chr13:78257518..78257522, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000855&oldid=3275373"