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Latest revision as of 13:03, 27 June 2012

Name:immature Schwann cell
Namespace:cell
Definition:"A glial cell that develops from a Schwann cell precursor. The immature Schwann cell is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has a basal lamina. Cells can survive without an axon present. Immature Schwann cell can be found communally ensheathing large groups of axons." [GOC:cvs, GOC:tfm, ISBN:0721662544]
Xrefs:
links:
ZFA:0001725
Synonyms: "Schwann cell" BROAD []
Created by:tmeehan
Creation date:2010-09-24T02:10:31Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002573(Schwann cell)
develops_from:CL:0002375(Schwann cell precursor)



Children


develops from:CL:0000218 (myelinating Schwann cell;;Schwann cell),CL:0002376 (non-myelinating Schwann cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002377 (immature Schwann cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr9:32560436..32560445,+#_8d127816cef35eb2863ec22a2159f278p@chr9:32560436..32560445, +
1.87e-86FFCP PHASE1:Mm9::chr18:24270578..24270588,-#_8d127816cef35eb2863ec22a2159f278p@chr18:24270578..24270588, -
1.87e-86FFCP PHASE1:Mm9::chr7:114866423..114866442,+#_8d127816cef35eb2863ec22a2159f278p@chr7:114866423..114866442, +
1.87e-86FFCP PHASE2:Mm9::chr1:92754564..92754577,+#_8d127816cef35eb2863ec22a2159f278p@chr1:92754564..92754577, +
1.87e-86FFCP PHASE1:Mm9::chr9:50562386..50562393,+#_8d127816cef35eb2863ec22a2159f278p@chr9:50562386..50562393, +
1.87e-86FFCP PHASE1:Mm9::chr5:152054997..152055007,+#_8d127816cef35eb2863ec22a2159f278p@chr5:152054997..152055007, +
1.87e-86FFCP PHASE2:Mm9::chrX:70920870..70920877,+#_8d127816cef35eb2863ec22a2159f278p21@Slc6a8
1.87e-86FFCP PHASE1:Mm9::chr18:57302359..57302364,+#_8d127816cef35eb2863ec22a2159f278p18@Megf10
1.87e-86FFCP PHASE2:Mm9::chr10:128359639..128359653,+#_8d127816cef35eb2863ec22a2159f278p@chr10:128359639..128359653, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302392..57302409,+#_8d127816cef35eb2863ec22a2159f278p11@Megf10
1.87e-86FFCP PHASE1:Mm9::chr6:17413432..17413442,+#_8d127816cef35eb2863ec22a2159f278p10@Met
1.87e-86FFCP PHASE1:Mm9::chr11:99720058..99720068,-#_8d127816cef35eb2863ec22a2159f278p@chr11:99720058..99720068, -
1.87e-86FFCP PHASE1:Mm9::chrX:70920870..70920877,+#_8d127816cef35eb2863ec22a2159f278p21@Slc6a8
1.87e-86FFCP PHASE1:Mm9::chr7:137963832..137963843,+#_8d127816cef35eb2863ec22a2159f278p@chr7:137963832..137963843, +
1.87e-86FFCP PHASE1:Mm9::chr13:95819359..95819371,-#_8d127816cef35eb2863ec22a2159f278p@chr13:95819359..95819371, -
1.87e-86FFCP PHASE1:Mm9::chr6:17441128..17441144,+#_8d127816cef35eb2863ec22a2159f278p@chr6:17441128..17441144, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302272..57302282,+#_8d127816cef35eb2863ec22a2159f278p16@Megf10
1.87e-86FFCP PHASE2:Mm9::chr15:87485366..87485375,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485366..87485375, +
1.87e-86FFCP PHASE2:Mm9::chr9:50562386..50562393,+#_8d127816cef35eb2863ec22a2159f278p@chr9:50562386..50562393, +
1.87e-86FFCP PHASE2:Mm9::chr2:13496978..13496987,+#_8d127816cef35eb2863ec22a2159f278p@chr2:13496978..13496987, +
1.87e-86FFCP PHASE1:Mm9::chr5:152055079..152055086,+#_8d127816cef35eb2863ec22a2159f278p@chr5:152055079..152055086, +
1.87e-86FFCP PHASE2:Mm9::chr14:74279307..74279342,+#_8d127816cef35eb2863ec22a2159f278p@chr14:74279307..74279342, +
1.87e-86FFCP PHASE2:Mm9::chr11:95431700..95431710,-#_8d127816cef35eb2863ec22a2159f278p@chr11:95431700..95431710, -
1.87e-86FFCP PHASE2:Mm9::chr7:114866423..114866442,+#_8d127816cef35eb2863ec22a2159f278p@chr7:114866423..114866442, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302368..57302389,+#_8d127816cef35eb2863ec22a2159f278p7@Megf10
1.87e-86FFCP PHASE2:Mm9::chr6:137465516..137465540,-#_8d127816cef35eb2863ec22a2159f278p@chr6:137465516..137465540, -
1.87e-86FFCP PHASE1:Mm9::chr14:74279307..74279342,+#_8d127816cef35eb2863ec22a2159f278p@chr14:74279307..74279342, +
1.87e-86FFCP PHASE1:Mm9::chr15:87485458..87485465,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485458..87485465, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302410..57302419,+#_8d127816cef35eb2863ec22a2159f278p17@Megf10
1.87e-86FFCP PHASE2:Mm9::chr7:138004756..138004766,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138004756..138004766, +
1.87e-86FFCP PHASE1:Mm9::chr7:138004756..138004766,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138004756..138004766, +
1.87e-86FFCP PHASE1:Mm9::chr1:92754564..92754577,+#_8d127816cef35eb2863ec22a2159f278p@chr1:92754564..92754577, +
1.87e-86FFCP PHASE1:Mm9::chr11:19939078..19939081,+#_8d127816cef35eb2863ec22a2159f278p@chr11:19939078..19939081, +
1.87e-86FFCP PHASE2:Mm9::chr5:152054997..152055007,+#_8d127816cef35eb2863ec22a2159f278p@chr5:152054997..152055007, +
1.87e-86FFCP PHASE2:Mm9::chr6:17413432..17413442,+#_8d127816cef35eb2863ec22a2159f278p10@Met
1.87e-86FFCP PHASE2:Mm9::chr18:57302324..57302348,+#_8d127816cef35eb2863ec22a2159f278p6@Megf10
1.87e-86FFCP PHASE1:Mm9::chr2:13346379..13346390,-#_8d127816cef35eb2863ec22a2159f278p@chr2:13346379..13346390, -
1.87e-86FFCP PHASE1:Mm9::chr6:137465516..137465540,-#_8d127816cef35eb2863ec22a2159f278p@chr6:137465516..137465540, -
1.87e-86FFCP PHASE2:Mm9::chr15:87485402..87485411,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485402..87485411, +
1.87e-86FFCP PHASE2:Mm9::chr7:137963832..137963843,+#_8d127816cef35eb2863ec22a2159f278p@chr7:137963832..137963843, +
1.87e-86FFCP PHASE1:Mm9::chr9:32560436..32560445,+#_8d127816cef35eb2863ec22a2159f278p@chr9:32560436..32560445, +
1.87e-86FFCP PHASE1:Mm9::chr7:138011022..138011028,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138011022..138011028, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302392..57302409,+#_8d127816cef35eb2863ec22a2159f278p11@Megf10
1.87e-86FFCP PHASE2:Mm9::chr6:137468262..137468263,-#_8d127816cef35eb2863ec22a2159f278p13@Eps8
1.87e-86FFCP PHASE2:Mm9::chr9:14575585..14575594,-#_8d127816cef35eb2863ec22a2159f278p7@1700012B09Rik
1.87e-86FFCP PHASE2:Mm9::chr6:17441128..17441144,+#_8d127816cef35eb2863ec22a2159f278p@chr6:17441128..17441144, +
1.87e-86FFCP PHASE1:Mm9::chr6:31038349..31038357,-#_8d127816cef35eb2863ec22a2159f278p2@ENSMUST00000123757
1.87e-86FFCP PHASE2:Mm9::chr17:27698308..27698322,+#_8d127816cef35eb2863ec22a2159f278p@chr17:27698308..27698322, +
1.87e-86FFCP PHASE2:Mm9::chr13:20332675..20332683,+#_8d127816cef35eb2863ec22a2159f278p@chr13:20332675..20332683, +
1.87e-86FFCP PHASE1:Mm9::chr18:57302272..57302282,+#_8d127816cef35eb2863ec22a2159f278p16@Megf10
1.87e-86FFCP PHASE2:Mm9::chr18:24270578..24270588,-#_8d127816cef35eb2863ec22a2159f278p@chr18:24270578..24270588, -
1.87e-86FFCP PHASE2:Mm9::chr5:152055079..152055086,+#_8d127816cef35eb2863ec22a2159f278p@chr5:152055079..152055086, +
1.87e-86FFCP PHASE1:Mm9::chr10:128359639..128359653,+#_8d127816cef35eb2863ec22a2159f278p@chr10:128359639..128359653, +
1.87e-86FFCP PHASE2:Mm9::chr11:19939078..19939081,+#_8d127816cef35eb2863ec22a2159f278p@chr11:19939078..19939081, +
1.87e-86FFCP PHASE2:Mm9::chr7:138011022..138011028,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138011022..138011028, +
1.87e-86FFCP PHASE1:Mm9::chr15:87485366..87485375,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485366..87485375, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302359..57302364,+#_8d127816cef35eb2863ec22a2159f278p18@Megf10
1.87e-86FFCP PHASE2:Mm9::chr1:185424641..185424650,+#_8d127816cef35eb2863ec22a2159f278p@chr1:185424641..185424650, +
1.87e-86FFCP PHASE2:Mm9::chr11:99720036..99720055,-#_8d127816cef35eb2863ec22a2159f278p@chr11:99720036..99720055, -
1.87e-86FFCP PHASE1:Mm9::chr6:137468262..137468263,-#_8d127816cef35eb2863ec22a2159f278p13@Eps8
1.87e-86FFCP PHASE1:Mm9::chr1:185424641..185424650,+#_8d127816cef35eb2863ec22a2159f278p@chr1:185424641..185424650, +
1.87e-86FFCP PHASE1:Mm9::chr7:138011031..138011037,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138011031..138011037, +
1.87e-86FFCP PHASE2:Mm9::chr2:13346379..13346390,-#_8d127816cef35eb2863ec22a2159f278p@chr2:13346379..13346390, -
1.87e-86FFCP PHASE1:Mm9::chr18:57302410..57302419,+#_8d127816cef35eb2863ec22a2159f278p17@Megf10
1.87e-86FFCP PHASE2:Mm9::chr12:45626625..45626647,+#_8d127816cef35eb2863ec22a2159f278p@chr12:45626625..45626647, +
1.87e-86FFCP PHASE1:Mm9::chr2:13496978..13496987,+#_8d127816cef35eb2863ec22a2159f278p@chr2:13496978..13496987, +
1.87e-86FFCP PHASE2:Mm9::chr13:95819359..95819371,-#_8d127816cef35eb2863ec22a2159f278p@chr13:95819359..95819371, -
1.87e-86FFCP PHASE2:Mm9::chr6:31038349..31038357,-#_8d127816cef35eb2863ec22a2159f278p2@ENSMUST00000123757
1.87e-86FFCP PHASE2:Mm9::chr11:56925925..56925960,-#_8d127816cef35eb2863ec22a2159f278p@chr11:56925925..56925960, -
1.87e-86FFCP PHASE1:Mm9::chr11:95431700..95431710,-#_8d127816cef35eb2863ec22a2159f278p@chr11:95431700..95431710, -
1.87e-86FFCP PHASE1:Mm9::chrX:149092046..149092052,-#_8d127816cef35eb2863ec22a2159f278p@chrX:149092046..149092052, -
1.87e-86FFCP PHASE1:Mm9::chr17:27698308..27698322,+#_8d127816cef35eb2863ec22a2159f278p@chr17:27698308..27698322, +
1.87e-86FFCP PHASE2:Mm9::chrX:149092046..149092052,-#_8d127816cef35eb2863ec22a2159f278p@chrX:149092046..149092052, -
1.87e-86FFCP PHASE1:Mm9::chr18:57302324..57302348,+#_8d127816cef35eb2863ec22a2159f278p6@Megf10
1.87e-86FFCP PHASE1:Mm9::chr12:45626625..45626647,+#_8d127816cef35eb2863ec22a2159f278p@chr12:45626625..45626647, +
1.87e-86FFCP PHASE2:Mm9::chr7:138011031..138011037,+#_8d127816cef35eb2863ec22a2159f278p@chr7:138011031..138011037, +
1.87e-86FFCP PHASE1:Mm9::chr9:14575585..14575594,-#_8d127816cef35eb2863ec22a2159f278p7@1700012B09Rik
1.87e-86FFCP PHASE1:Mm9::chr15:87485402..87485411,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485402..87485411, +
1.87e-86FFCP PHASE2:Mm9::chr18:57302368..57302389,+#_8d127816cef35eb2863ec22a2159f278p7@Megf10
1.87e-86FFCP PHASE2:Mm9::chr11:99720058..99720068,-#_8d127816cef35eb2863ec22a2159f278p@chr11:99720058..99720068, -
1.87e-86FFCP PHASE2:Mm9::chr15:87485458..87485465,+#_8d127816cef35eb2863ec22a2159f278p@chr15:87485458..87485465, +
1.87e-86FFCP PHASE1:Mm9::chr13:20332675..20332683,+#_8d127816cef35eb2863ec22a2159f278p@chr13:20332675..20332683, +
1.87e-86FFCP PHASE1:Mm9::chr11:99720036..99720055,-#_8d127816cef35eb2863ec22a2159f278p@chr11:99720036..99720055, -
1.87e-86FFCP PHASE1:Mm9::chr11:56925925..56925960,-#_8d127816cef35eb2863ec22a2159f278p@chr11:56925925..56925960, -
1.68e-58FFCP PHASE2:Mm9::chr12:45626679..45626689,+#_23046064aefbc1ec5b67a98014e26aafp@chr12:45626679..45626689, +
1.68e-58FFCP PHASE2:Mm9::chr9:108885049..108885071,+#_23046064aefbc1ec5b67a98014e26aafp5@Col7a1
1.68e-58FFCP PHASE1:Mm9::chr18:60878370..60878380,-#_23046064aefbc1ec5b67a98014e26aafp@chr18:60878370..60878380, -
1.68e-58FFCP PHASE1:Mm9::chr14:32478998..32479009,+#_23046064aefbc1ec5b67a98014e26aafp@chr14:32478998..32479009, +
1.68e-58FFCP PHASE1:Mm9::chr12:45626679..45626689,+#_23046064aefbc1ec5b67a98014e26aafp@chr12:45626679..45626689, +
1.68e-58FFCP PHASE1:Mm9::chr9:14575600..14575609,-#_23046064aefbc1ec5b67a98014e26aafp8@1700012B09Rik
1.68e-58FFCP PHASE1:Mm9::chr15:87485433..87485449,+#_23046064aefbc1ec5b67a98014e26aafp@chr15:87485433..87485449, +
1.68e-58FFCP PHASE2:Mm9::chr2:13346395..13346412,-#_23046064aefbc1ec5b67a98014e26aafp@chr2:13346395..13346412, -
1.68e-58FFCP PHASE1:Mm9::chr5:98683193..98683209,+#_23046064aefbc1ec5b67a98014e26aafp4@Fgf5
1.68e-58FFCP PHASE1:Mm9::chr6:31038542..31038552,-#_23046064aefbc1ec5b67a98014e26aafp@chr6:31038542..31038552, -
1.68e-58FFCP PHASE1:Mm9::chr12:53884275..53884286,+#_23046064aefbc1ec5b67a98014e26aafp@chr12:53884275..53884286, +
1.68e-58FFCP PHASE1:Mm9::chr18:5404573..5404587,-#_23046064aefbc1ec5b67a98014e26aafp@chr18:5404573..5404587, -
1.68e-58FFCP PHASE2:Mm9::chr12:45626698..45626717,+#_23046064aefbc1ec5b67a98014e26aafp@chr12:45626698..45626717, +
1.68e-58FFCP PHASE1:Mm9::chr9:108885049..108885071,+#_23046064aefbc1ec5b67a98014e26aafp5@Col7a1
1.68e-58FFCP PHASE1:Mm9::chr7:138010877..138010906,-#_23046064aefbc1ec5b67a98014e26aafp@chr7:138010877..138010906, -
1.68e-58FFCP PHASE2:Mm9::chr6:72331674..72331699,-#_23046064aefbc1ec5b67a98014e26aafp@chr6:72331674..72331699, -

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