UBERON:0003834: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A blood vessel that is part of a thorax [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003834 | |||
|is_a=UBERON:0003513 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=thoracic segment blood vessel | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000915 | |part_of=UBERON:0000915 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="blood vessel of thorax" EXACT [OBOL:automatic];;"thorax blood vessel" EXACT [OBOL:automatic];;"upper body blood vessel" RELATED [MA:0000558] | ||
|union_of= | |||
|xref=MA:0000558 | |||
}} | }} | ||
Latest revision as of 17:41, 12 September 2014
| Name: | thoracic segment blood vessel | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A blood vessel that is part of a thorax [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood vessel of thorax" EXACT [OBOL:automatic] "thorax blood vessel" EXACT [OBOL:automatic] "upper body blood vessel" RELATED [MA:0000558] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003513(trunk blood vessel) |
|---|---|
| part_of: | UBERON:0000915(thoracic segment of trunk) |
Children
| is a: | UBERON:0003498 (heart blood vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003834 (thoracic segment blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.65e-59 | FFCP PHASE2:Hg19::chr19:18319115..18319122,+#_757275e9f41f77e05a03ffa221a78bc3 | p@chr19:18319115..18319122, + |
| 1.65e-59 | FFCP PHASE1:Hg19::chr19:18319115..18319122,+#_757275e9f41f77e05a03ffa221a78bc3 | p@chr19:18319115..18319122, + |
| 3.22e-57 | FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_bf5d1a100d10c3191eba8a66f9a43e50 | p@chr9:3898831..3898843, - |
| 3.22e-57 | FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_bf5d1a100d10c3191eba8a66f9a43e50 | p@chr9:3898831..3898843, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr13:67922393..67922399,-#_c238ab9157fd02aba07a9c17e5ec21fb | p@chr13:67922393..67922399, - |
| 1.94e-51 | FFCP PHASE2:Hg19::chr13:67922393..67922399,-#_c238ab9157fd02aba07a9c17e5ec21fb | p@chr13:67922393..67922399, - |
| 2.3e-51 | FFCP PHASE2:Hg19::chr8:4812273..4812274,-#_e0ea5580caa849c18d82f3d0ae34eee1 | p@chr8:4812273..4812274, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr8:4812273..4812274,-#_e0ea5580caa849c18d82f3d0ae34eee1 | p@chr8:4812273..4812274, - |
| 1.42e-40 | FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_62fb2998a8987523d4c8aa23bbebf6b2 | p@chr11:102668160..102668174, + |
| 1.42e-40 | FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_62fb2998a8987523d4c8aa23bbebf6b2 | p@chr11:102668160..102668174, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr21:29911657..29911665,+#_48f6620dc6df021e4587f6d2038ba55d | p2@LINC00161 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr21:29911657..29911665,+#_48f6620dc6df021e4587f6d2038ba55d | p2@LINC00161 |
| 3.31e-40 | FFCP PHASE1:Hg19::chr9:3899086..3899097,-#_64dba7b832e8566b1931a7524109d5ff | p@chr9:3899086..3899097, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr9:3899086..3899097,-#_64dba7b832e8566b1931a7524109d5ff | p@chr9:3899086..3899097, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr6:50692227..50692236,+#_64dba7b832e8566b1931a7524109d5ff | p@chr6:50692227..50692236, + |
| 3.31e-40 | FFCP PHASE1:Hg19::chr6:50692227..50692236,+#_64dba7b832e8566b1931a7524109d5ff | p@chr6:50692227..50692236, + |
| 4.35e-40 | FFCP PHASE2:Hg19::chrY:16915943..16915949,-#_9784feae356a4fdf9fc4830e8c4d1635 | p1@NLGN4Y-AS1 |
| 4.35e-40 | FFCP PHASE1:Hg19::chrY:16915943..16915949,-#_9784feae356a4fdf9fc4830e8c4d1635 | p1@NLGN4Y-AS1 |
| 2.29e-38 | FFCP PHASE2:Hg19::chr7:93516564..93516575,+#_527454f0931c7a7c2941f0d300ff12a1 | p@chr7:93516564..93516575, + |
| 2.29e-38 | FFCP PHASE1:Hg19::chr7:93516564..93516575,+#_527454f0931c7a7c2941f0d300ff12a1 | p@chr7:93516564..93516575, + |
| 2.0e-36 | FFCP PHASE2:Hg19::chr19:55877364..55877367,-#_d194e9c165bae33ca3057d139aec4b2c | p@chr19:55877364..55877367, - |
| 2.0e-36 | FFCP PHASE1:Hg19::chr19:55877364..55877367,-#_d194e9c165bae33ca3057d139aec4b2c | p@chr19:55877364..55877367, - |
| 2.07e-36 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_7431cef48bfe926843901c1f40cb64a0 | p@chr6:53359400..53359406, + |
| 2.07e-36 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_7431cef48bfe926843901c1f40cb64a0 | p@chr6:53359400..53359406, + |
| 2.55e-36 | FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_13466f37753e42c0420b44fe19435f1e | p9@TFPI2 |
| 2.55e-36 | FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_13466f37753e42c0420b44fe19435f1e | p9@TFPI2 |
| 7.75e-34 | FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_5a3060d47660cbfc3306bc8578ab1c53 | p@chr21:30000326..30000330, + |
| 7.75e-34 | FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_5a3060d47660cbfc3306bc8578ab1c53 | p@chr21:30000326..30000330, + |
| 6.67e-33 | FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_af2bb59c0ca86e9b0e131c1c10515997 | p@chr9:3898804..3898817, - |
| 6.67e-33 | FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_af2bb59c0ca86e9b0e131c1c10515997 | p@chr9:3898804..3898817, - |
| 9.62e-32 | FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_3e0f20ce378118e7e94e4731f4cc8a39 | p7@CXCL6 |
| 9.62e-32 | FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_3e0f20ce378118e7e94e4731f4cc8a39 | p7@CXCL6 |
| 2.86e-30 | FFCP PHASE1:Hg19::chr11:27723059..27723067,-#_32ab8deabc674e70a0906cb846b1f0e2 | p11@BDNF |
| 2.86e-30 | FFCP PHASE2:Hg19::chr11:27723059..27723067,-#_32ab8deabc674e70a0906cb846b1f0e2 | p11@BDNF |
| 6.35e-30 | FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_1149b1293c2a097daf0a61613e6894a8 | p@chr12:63025600..63025629, + |
| 6.35e-30 | FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_1149b1293c2a097daf0a61613e6894a8 | p@chr12:63025600..63025629, + |
| 1.14e-29 | FFCP PHASE1:Hg19::chr7:93515914..93515935,-#_23a998a4f8a47205aebfe1b52a77c69b | p@chr7:93515914..93515935, - |
| 1.14e-29 | FFCP PHASE2:Hg19::chr7:93515914..93515935,-#_23a998a4f8a47205aebfe1b52a77c69b | p@chr7:93515914..93515935, - |
| 3.44e-29 | FFCP PHASE2:Hg19::chr10:35930025..35930031,-#_a88e7147983492a6bc0bdfc227785463 | p1@FZD8 |
| 3.44e-29 | FFCP PHASE1:Hg19::chr10:35930025..35930031,-#_a88e7147983492a6bc0bdfc227785463 | p1@FZD8 |
| 5.33e-29 | FFCP PHASE2:Hg19::chrX:142113711..142113717,+#_dbe2b009905abe2a07a9972a7534732d | p1@SPANXN4 |
| 5.33e-29 | FFCP PHASE1:Hg19::chrX:142113711..142113717,+#_dbe2b009905abe2a07a9972a7534732d | p1@SPANXN4 |
| 1.16e-28 | FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_496f3da3fb387d041f4c54360d9ab6e6 | p@chr11:102662218..102662229, - |
| 1.16e-28 | FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_496f3da3fb387d041f4c54360d9ab6e6 | p@chr11:102662218..102662229, - |
| 2.11e-28 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_eba8ecc9876f2088024d07dd98fe012e | p@chr4:54931877..54931892, - |
| 2.11e-28 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_eba8ecc9876f2088024d07dd98fe012e | p@chr4:54931877..54931892, - |
| 4.13e-28 | FFCP PHASE1:Hg19::chr9:33797932..33797960,-#_9e4b671812043301e44a1686df1fea0b | p@chr9:33797932..33797960, - |
| 4.13e-28 | FFCP PHASE2:Hg19::chr9:33797932..33797960,-#_9e4b671812043301e44a1686df1fea0b | p@chr9:33797932..33797960, - |
| 5.46e-28 | FFCP PHASE2:Hg19::chr19:52076425..52076440,+#_c4b1c5938cf1d68b763e703d79f70c37 | p2@ZNF175 |
| 5.46e-28 | FFCP PHASE1:Hg19::chr19:52076425..52076440,+#_c4b1c5938cf1d68b763e703d79f70c37 | p2@ZNF175 |
| 5.51e-28 | FFCP PHASE2:Hg19::chr17:32583293..32583323,-#_484609994a6171c5cd7fc59874903c4b | p@chr17:32583293..32583323, - |
| 5.51e-28 | FFCP PHASE1:Hg19::chr17:32583293..32583323,-#_484609994a6171c5cd7fc59874903c4b | p@chr17:32583293..32583323, - |
| 8.03e-28 | FFCP PHASE2:Hg19::chr5:150157860..150157883,+#_bdc736be48309c58216bb08f3fcab7a7 | p4@C5orf62 |
| 8.03e-28 | FFCP PHASE1:Hg19::chr5:150157860..150157883,+#_bdc736be48309c58216bb08f3fcab7a7 | p4@C5orf62 |
| 1.46e-27 | FFCP PHASE2:Hg19::chr3:172351514..172351536,-#_d47bc3a20c9d0c355e88db43de43fa4c | p@chr3:172351514..172351536, - |
| 1.46e-27 | FFCP PHASE1:Hg19::chr3:172351514..172351536,-#_d47bc3a20c9d0c355e88db43de43fa4c | p@chr3:172351514..172351536, - |
| 1.66e-27 | FFCP PHASE2:Hg19::chr2:113587914..113587925,+#_ff0c96b1a4d7773403bc6087fc06ccb0 | p@chr2:113587914..113587925, + |
| 1.66e-27 | FFCP PHASE1:Hg19::chr2:113587914..113587925,+#_ff0c96b1a4d7773403bc6087fc06ccb0 | p@chr2:113587914..113587925, + |
| 2.38e-27 | FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_24f0f7a8e01a24670e10e20ba3996f7e | p@chr4:169022528..169022531, + |
| 2.38e-27 | FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_24f0f7a8e01a24670e10e20ba3996f7e | p@chr4:169022528..169022531, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr18:68919827..68919832,+#_ab0f12967925c02362ceeca90668630b | p@chr18:68919827..68919832, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:77056181..77056190,+#_ab0f12967925c02362ceeca90668630b | p2@ZNF503-AS1 |
| 2.72e-27 | FFCP PHASE1:Hg19::chr18:68919827..68919832,+#_ab0f12967925c02362ceeca90668630b | p@chr18:68919827..68919832, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:77056181..77056190,+#_ab0f12967925c02362ceeca90668630b | p2@ZNF503-AS1 |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:151514337..151514348,+#_942beab3509d4d6aa927fb6a66ec851d | p@chr3:151514337..151514348, + |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:157206111..157206139,-#_942beab3509d4d6aa927fb6a66ec851d | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:157206111..157206139,-#_942beab3509d4d6aa927fb6a66ec851d | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:151514337..151514348,+#_942beab3509d4d6aa927fb6a66ec851d | p@chr3:151514337..151514348, + |
| 6.82e-27 | FFCP PHASE1:Hg19::chr5:54281153..54281165,-#_8196cccef23d9a458114914238a7813d | p1@AB590689 |
| 6.82e-27 | FFCP PHASE2:Hg19::chr5:54281153..54281165,-#_8196cccef23d9a458114914238a7813d | p1@AB590689 |
| 7.86e-27 | FFCP PHASE2:Hg19::chr4:74902919..74902931,-#_9aafbd019652efed98ff4fedeec40e0d | p@chr4:74902919..74902931, - |
| 7.86e-27 | FFCP PHASE1:Hg19::chr4:74902919..74902931,-#_9aafbd019652efed98ff4fedeec40e0d | p@chr4:74902919..74902931, - |
| 9.32e-27 | FFCP PHASE2:Hg19::chr7:93519528..93519538,-#_bebfe331cbc815607f74106a59610891 | p7@TFPI2 |
| 9.32e-27 | FFCP PHASE1:Hg19::chr7:93519528..93519538,-#_bebfe331cbc815607f74106a59610891 | p7@TFPI2 |
| 1.7e-26 | FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_df47c877f2c45258562e991e669a1c56 | p12@MMP1 |
| 1.7e-26 | FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_df47c877f2c45258562e991e669a1c56 | p12@MMP1 |
| 3.65e-26 | FFCP PHASE2:Hg19::chr7:93519576..93519598,+#_77f4abe55dc7425772a772097dba3a05 | p@chr7:93519576..93519598, + |
| 3.65e-26 | FFCP PHASE1:Hg19::chr7:93519576..93519598,+#_77f4abe55dc7425772a772097dba3a05 | p@chr7:93519576..93519598, + |
| 4.43e-26 | FFCP PHASE2:Hg19::chr1:12010434..12010450,+#_9b41d13da57b922c89a2479fe53086f3 | p@chr1:12010434..12010450, + |
| 4.43e-26 | FFCP PHASE1:Hg19::chr1:12010434..12010450,+#_9b41d13da57b922c89a2479fe53086f3 | p@chr1:12010434..12010450, + |
| 4.97e-26 | FFCP PHASE2:Hg19::chr8:42042635..42042650,-#_c394ad143d6d61a0bfec74dadff15d83 | p4@PLAT |
| 4.97e-26 | FFCP PHASE1:Hg19::chr8:42042635..42042650,-#_c394ad143d6d61a0bfec74dadff15d83 | p4@PLAT |
| 8.4e-26 | FFCP PHASE1:Hg19::chr7:93515840..93515856,-#_9aff586d4fef72b3b62853ea7d0cc62d | p@chr7:93515840..93515856, - |
| 8.4e-26 | FFCP PHASE2:Hg19::chr7:93515840..93515856,-#_9aff586d4fef72b3b62853ea7d0cc62d | p@chr7:93515840..93515856, - |
| 2.89e-25 | FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_98a2d44ce55dacb3bf48e2ae032f6cc5 | p@chr9:6257179..6257191, + |
| 2.89e-25 | FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_98a2d44ce55dacb3bf48e2ae032f6cc5 | p@chr9:6257179..6257191, + |
| 3.95e-25 | FFCP PHASE2:Hg19::chr8:42044977..42044996,-#_fe7fcc65b410e528e393126c9ce6dd0f | p@chr8:42044977..42044996, - |
| 3.95e-25 | FFCP PHASE1:Hg19::chr8:42044977..42044996,-#_fe7fcc65b410e528e393126c9ce6dd0f | p@chr8:42044977..42044996, - |
| 4.18e-25 | FFCP PHASE2:Hg19::chr21:28216589..28216607,-#_0e78b4e201ed245154fac29b0d000281 | p2@ADAMTS1 |
| 4.18e-25 | FFCP PHASE1:Hg19::chr21:28216589..28216607,-#_0e78b4e201ed245154fac29b0d000281 | p2@ADAMTS1 |
| 1.2e-24 | FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_d49b67d9dd939023e185cf103a62c511 | p@chr3:112081052..112081065, - |
| 1.2e-24 | FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_d49b67d9dd939023e185cf103a62c511 | p@chr3:112081052..112081065, - |
| 2.08e-24 | FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_27fd125d873c442bf8cdfb03445acc43 | p@chr3:67141193..67141198, + |
| 2.08e-24 | FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_27fd125d873c442bf8cdfb03445acc43 | p@chr3:67141193..67141198, + |
| 4.08e-24 | FFCP PHASE2:Hg19::chr8:122653115..122653124,-#_5006e567ccce5eb24eb5131e3398f7d8 | p7@HAS2 |
| 4.08e-24 | FFCP PHASE1:Hg19::chr8:122653115..122653124,-#_5006e567ccce5eb24eb5131e3398f7d8 | p7@HAS2 |
| 4.76e-24 | FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_ac6c2767eb91947683b89d01017e0f83 | p@chr9:6256728..6256739, + |
| 4.76e-24 | FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_ac6c2767eb91947683b89d01017e0f83 | p@chr9:6256728..6256739, + |
| 6.41e-24 | FFCP PHASE2:Hg19::chr2:224839877..224839882,+#_701411d8e61836956f8081731d727643 | p@chr2:224839877..224839882, + |
| 6.41e-24 | FFCP PHASE1:Hg19::chr2:224839877..224839882,+#_701411d8e61836956f8081731d727643 | p@chr2:224839877..224839882, + |
