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{{UBERON
{{UBERON
|id=UBERON:0004807
|alt_id=
|name=respiratory system epithelium
|namespace=
|def="An epithelium that is part of a respiratory system [Obol]." [OBOL:automatic]
|xref=MA:0001823
|is_a=UBERON:0000483
|synonym="apparatus respiratorius epithelial tissue" EXACT [OBOL:automatic];;"apparatus respiratorius epithelium" EXACT [OBOL:automatic];;"epithelial tissue of apparatus respiratorius" EXACT [OBOL:automatic];;"epithelial tissue of respiratory system" EXACT [OBOL:automatic];;"epithelium of apparatus respiratorius" EXACT [OBOL:automatic];;"epithelium of respiratory system" EXACT [OBOL:automatic];;"respiratory system epithelial tissue" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An epithelium that is part of a respiratory system [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004807
|is_a=UBERON:0000483
|is_obsolete=
|located_in=
|located_in=
|name=respiratory system epithelium
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001004
|part_of=UBERON:0001004
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="apparatus respiratorius epithelial tissue" EXACT [OBOL:automatic];;"apparatus respiratorius epithelium" EXACT [OBOL:automatic];;"epithelial tissue of apparatus respiratorius" EXACT [OBOL:automatic];;"epithelial tissue of respiratory system" EXACT [OBOL:automatic];;"epithelium of apparatus respiratorius" EXACT [OBOL:automatic];;"epithelium of respiratory system" EXACT [OBOL:automatic];;"respiratory system epithelial tissue" EXACT [OBOL:automatic]
|union_of=
|xref=MA:0001823
}}
}}

Latest revision as of 17:48, 12 September 2014

Name:respiratory system epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a respiratory system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001823
Synonyms: "apparatus respiratorius epithelial tissue" EXACT [OBOL:automatic]
"apparatus respiratorius epithelium" EXACT [OBOL:automatic]
"epithelial tissue of apparatus respiratorius" EXACT [OBOL:automatic]
"epithelial tissue of respiratory system" EXACT [OBOL:automatic]
"epithelium of apparatus respiratorius" EXACT [OBOL:automatic]
"epithelium of respiratory system" EXACT [OBOL:automatic]
"respiratory system epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium)
part_of:UBERON:0001004(respiratory system)



Children

is a:UBERON:0003351 (pharyngeal epithelium),UBERON:0004802 (respiratory tract epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004807 (respiratory system epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.76e-68FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_765dbf335ac818f7ea541920241873ecp4@uc009bpa.1
1.76e-68FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_765dbf335ac818f7ea541920241873ecp4@uc009bpa.1
2.4e-67FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_f9c2d04a92288c9277511ff2f41c4e3ep8@uc009bpa.1
2.4e-67FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_f9c2d04a92288c9277511ff2f41c4e3ep8@uc009bpa.1
1.12e-65FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_b2a93077fc38e3aa16f742ff5696ef4ap1@ENSMUST00000103288, p1@uc009bpl.1
1.12e-65FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_b2a93077fc38e3aa16f742ff5696ef4ap1@ENSMUST00000103288, p1@uc009bpl.1
2.12e-64FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_982e97e6ba53d4e2bff677ab8f9ffdcap@chr6:41491752..41491776, -
2.12e-64FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_982e97e6ba53d4e2bff677ab8f9ffdcap@chr12:108361918..108361930, -
2.12e-64FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_982e97e6ba53d4e2bff677ab8f9ffdcap@chr12:108361918..108361930, -
2.12e-64FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_982e97e6ba53d4e2bff677ab8f9ffdcap@chr6:41491752..41491776, -
3.88e-63FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_e2355ba25bd1b0aa688d717ec71f133bp2@ENSMUST00000103283
3.88e-63FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_e2355ba25bd1b0aa688d717ec71f133bp2@ENSMUST00000103283
4.88e-63FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_93fb41e8df680d6d0423bc43bddb280cp1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
4.88e-63FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_93fb41e8df680d6d0423bc43bddb280cp1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1
7.68e-62FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_03f02e3b6a87adae9866c2f0e51abd30p@chr9:44807434..44807445, -
7.68e-62FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_03f02e3b6a87adae9866c2f0e51abd30p@chr9:44807434..44807445, -
1.0e-61FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_ac6bc5639569d42b5643919f8dd2141ap@chr6:41494001..41494028, +
1.0e-61FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_ac6bc5639569d42b5643919f8dd2141ap@chr6:41494001..41494028, +
2.4e-61FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_bef061486a7c6ce59212a606045d526fp@chr9:44809185..44809215, -
2.4e-61FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_bef061486a7c6ce59212a606045d526fp@chr9:44809185..44809215, -
2.59e-61FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_61c55c53e5a9efc106e6bd4269001fb8p11@Prkcq
2.59e-61FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_61c55c53e5a9efc106e6bd4269001fb8p11@Prkcq
8.25e-61FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_d326a0fdce527a4d0957ac4ce3a2c30dp@chr14:54791784..54791787, +
8.25e-61FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_d326a0fdce527a4d0957ac4ce3a2c30dp@chr14:54791784..54791787, +
1.47e-60FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_ed5a853b72a97c61cac8019c5b606672p1@ENSMUST00000103263
1.47e-60FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_ed5a853b72a97c61cac8019c5b606672p1@ENSMUST00000103263
2.74e-60FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_0da8bd72e4c7efea02f033cc4a885fb2p5@Themis
2.74e-60FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_0da8bd72e4c7efea02f033cc4a885fb2p5@Themis
3.21e-60FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_9da51a9a2a8ad6a7afd343346a6ab89bp5@uc009bpa.1
3.21e-60FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_9da51a9a2a8ad6a7afd343346a6ab89bp5@uc009bpa.1
3.77e-60FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_f706b32351e725d2ae3faf4b7501eea8p@chr9:44793518..44793537, +
3.77e-60FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_f706b32351e725d2ae3faf4b7501eea8p@chr9:44793518..44793537, +
4.87e-60FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_8479071c913e01aad20b6b09e66d43c2p@chr6:41071548..41071565, +
4.87e-60FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_8479071c913e01aad20b6b09e66d43c2p@chr6:41071548..41071565, +
9.63e-60FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_33fbd8972cb3035a0df240c73b60c73bp2@uc009bnp.1, p2@uc012eki.1
9.63e-60FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_33fbd8972cb3035a0df240c73b60c73bp2@uc009bnp.1, p2@uc012eki.1
5.49e-59FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_9c901118005568e3743ce9cf98e0eeb1p5@Tcf7
5.49e-59FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_9c901118005568e3743ce9cf98e0eeb1p5@Tcf7
2.14e-58FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_eee90c65dfae176f4e6ad2c08dbec13dp@chr14:61328148..61328173, +
2.14e-58FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_eee90c65dfae176f4e6ad2c08dbec13dp@chr14:61328148..61328173, +
3.25e-58FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_a8beb9d89b685c586476ddceb45d775fp2@uc009bpa.1
3.25e-58FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_a8beb9d89b685c586476ddceb45d775fp2@uc009bpa.1
3.74e-58FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_ada92b532b2fef59ea453a5b44e1b1b2p2@Sh2d1a
3.74e-58FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_ada92b532b2fef59ea453a5b44e1b1b2p2@Sh2d1a
7.15e-58FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_ccf9215260319be977e93119bb9fb167p1@uc012ekr.1
7.15e-58FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_ccf9215260319be977e93119bb9fb167p1@uc012ekr.1
9.05e-58FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_88743330460920e646ffea6820eb5a21p2@1810009J06Rik
9.05e-58FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_88743330460920e646ffea6820eb5a21p2@1810009J06Rik
1.34e-57FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_7511f4ebf75c45ee47005fc549402cf7p1@uc012ekk.1
1.34e-57FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_7511f4ebf75c45ee47005fc549402cf7p1@uc012ekk.1
1.56e-57FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_4127bed598c9bd53b09c913a4947719dp3@uc009bpo.1, p3@uc009bpp.1
1.56e-57FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_4127bed598c9bd53b09c913a4947719dp3@uc009bpo.1, p3@uc009bpp.1
1.56e-57FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_4127bed598c9bd53b09c913a4947719dp1@ENSMUST00000103265
1.56e-57FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_4127bed598c9bd53b09c913a4947719dp1@ENSMUST00000103265
3.61e-57FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_e6695181c89e49b09ce9f8a78c73b43ep@chr7:133512043..133512060, -
3.61e-57FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_e6695181c89e49b09ce9f8a78c73b43ep@chr7:133512043..133512060, -
4.31e-57FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_53cfa673ab8b8fe51c9d1ad618edacb8p2@Gm5409
4.31e-57FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_53cfa673ab8b8fe51c9d1ad618edacb8p2@Gm5409
6.91e-57FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_59a22c413bbe5908733fd14958b64382p4@Trat1
6.91e-57FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_59a22c413bbe5908733fd14958b64382p4@Trat1
6.93e-57FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_fe44e78801439601b4268594f16a7d0bp5@Trat1
6.93e-57FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_fe44e78801439601b4268594f16a7d0bp5@Trat1
7.43e-57FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_836d2aebfdc9374def3cd9d51cc9aa85p@chr6:41489240..41489252, +
7.43e-57FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_836d2aebfdc9374def3cd9d51cc9aa85p@chr6:41489240..41489252, +
1.27e-56FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_10af2cda84e27da490d40cb5ffa7e376p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1
1.27e-56FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_10af2cda84e27da490d40cb5ffa7e376p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1
1.56e-56FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_c58bbb3c7f8c0728c3c30f566b0bfbd4p1@ENSMUST00000103282
1.56e-56FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_c58bbb3c7f8c0728c3c30f566b0bfbd4p1@ENSMUST00000103282
1.56e-56FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_c58bbb3c7f8c0728c3c30f566b0bfbd4p@chr6:41494376..41494389, -
1.56e-56FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_c58bbb3c7f8c0728c3c30f566b0bfbd4p@chr6:41494376..41494389, -
1.67e-56FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_bcd4e53f5d6a81ebcb7cce4432d5fdf8p1@ENSMUST00000103298, p1@uc009bpy.1
1.67e-56FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_bcd4e53f5d6a81ebcb7cce4432d5fdf8p1@ENSMUST00000103298, p1@uc009bpy.1
1.92e-56FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_670dd56d23157575b1794bfe91ea865bp@chr6:41492643..41492662, +
1.92e-56FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_670dd56d23157575b1794bfe91ea865bp@chr6:41492643..41492662, +
2.05e-56FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_82d7fb05a5861d5c17bfd433241bf16ep@chr14:54794540..54794554, +
2.05e-56FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_82d7fb05a5861d5c17bfd433241bf16ep@chr14:54794540..54794554, +
2.23e-56FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_17aa0aadd46903773f80e08751d906edp@chr6:41491801..41491815, -
2.23e-56FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_17aa0aadd46903773f80e08751d906edp@chr6:41491801..41491815, -
2.23e-56FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_17aa0aadd46903773f80e08751d906edp@chr14:54496363..54496388, +
2.23e-56FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_17aa0aadd46903773f80e08751d906edp@chr14:54496363..54496388, +
2.36e-56FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_f8a84f7a0c3cb6695cffef63b70b385dp@chr6:41492605..41492621, +
2.36e-56FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_f8a84f7a0c3cb6695cffef63b70b385dp@chr6:41492605..41492621, +
2.54e-56FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_acffd28a88b82d952c9c485abcf69057p1@Il13
2.54e-56FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_acffd28a88b82d952c9c485abcf69057p1@Il13
2.88e-56FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_76c7712af844d218791fa5dd19da2b58p7@Lat
2.88e-56FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_76c7712af844d218791fa5dd19da2b58p7@Lat
3.14e-56FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_6b0d87825bd068fd03a68a9ab2141faep@chr6:41138311..41138333, +
3.14e-56FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_6b0d87825bd068fd03a68a9ab2141faep@chr6:41138311..41138333, +
4.06e-56FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_6fd2166ea1badd49992f0ec35dee71dap5@uc009bnp.1, p5@uc012eki.1
4.06e-56FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_6fd2166ea1badd49992f0ec35dee71dap5@uc009bnp.1, p5@uc012eki.1
4.76e-56FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_fd4bd9a52375af57ea87b7cc347f59cbp6@uc009bpa.1
4.76e-56FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_fd4bd9a52375af57ea87b7cc347f59cbp6@uc009bpa.1
4.76e-56FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_fd4bd9a52375af57ea87b7cc347f59cbp@chr4:125978325..125978339, -
4.76e-56FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_fd4bd9a52375af57ea87b7cc347f59cbp8@Lat
4.76e-56FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_fd4bd9a52375af57ea87b7cc347f59cbp@chr4:125978325..125978339, -
4.76e-56FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_fd4bd9a52375af57ea87b7cc347f59cbp8@Lat
3.9e-55FFCP PHASE1:Mm9::chr19:10904535..10904553,-#_bced992b2c0a75ee6c3f4a98d20f51c5p2@Cd6
3.9e-55FFCP PHASE2:Mm9::chr19:10904535..10904553,-#_bced992b2c0a75ee6c3f4a98d20f51c5p2@Cd6
4.2e-55FFCP PHASE1:Mm9::chr11:52075039..52075066,+#_3f3f45c2182b7bb969019906c8097a8ap@chr11:52075039..52075066, +
4.2e-55FFCP PHASE2:Mm9::chr11:52075039..52075066,+#_3f3f45c2182b7bb969019906c8097a8ap@chr11:52075039..52075066, +

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